RNA–Protein interactions for RNA: YMR107W

SPG4, Transcript of Protein required for high temperature survival during stationary phase, yeastyeast

Gene SPG4, Length 348 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPG4YMR107W RPS27BP38711 82 aa4.38□□□□□ -1.71
SPG4YMR107W PET8P38921 284 aa4.38□□□□□ -1.71
SPG4YMR107W SHO1P40073 367 aa4.38□□□□□ -1.71
SPG4YMR107W OYE3P41816 400 aaPredicted RBP4.38□□□□□ -1.71
SPG4YMR107W EGT2P42835 1041 aa4.38□□□□□ -1.71
SPG4YMR107W HNT2P49775 206 aa4.38□□□□□ -1.71
SPG4YMR107W YNR064CP53750 290 aa4.38□□□□□ -1.71
SPG4YMR107W YDR102CQ03864 110 aa4.38□□□□□ -1.71
SPG4YMR107W DIC1Q06143 298 aa4.38□□□□□ -1.71
SPG4YMR107W YOR186WQ08560 144 aa4.38□□□□□ -1.71
SPG4YMR107W YPL229WQ99395 206 aa4.38□□□□□ -1.71
SPG4YMR107W YMR316C-AI2HB70 103 aa4.37□□□□□ -1.71
SPG4YMR107W URK1P27515 501 aa4.37□□□□□ -1.71
SPG4YMR107W SFT2P38166 215 aa4.37□□□□□ -1.71
SPG4YMR107W UBS1P38290 277 aa4.37□□□□□ -1.71
SPG4YMR107W YEL067CP39978 195 aa4.37□□□□□ -1.71
SPG4YMR107W HUA1P40325 198 aa4.37□□□□□ -1.71
SPG4YMR107W BNA2P47125 453 aa4.37□□□□□ -1.71
SPG4YMR107W YIL014C-AQ02598 104 aa4.37□□□□□ -1.71
SPG4YMR107W YDR042CQ03205 200 aa4.37□□□□□ -1.71
SPG4YMR107W IRC19Q07843 230 aa4.37□□□□□ -1.71
SPG4YMR107W GEP3Q08622 556 aa4.37□□□□□ -1.71
SPG4YMR107W TIM18Q08749 192 aa4.37□□□□□ -1.71
SPG4YMR107W MSL5Q12186 476 aaKnown RBP RIP-Chip data4.37□□□□□ -1.71not detected
SPG4YMR107W YDL022C-AP0C5L6 82 aa4.36□□□□□ -1.71
SPG4YMR107W RPL23AP0CX41 137 aaKnown RBP4.36□□□□□ -1.71
SPG4YMR107W RPL23BP0CX42 137 aaKnown RBP4.36□□□□□ -1.71
SPG4YMR107W MRPL31P14063 131 aaPredicted RBP4.36□□□□□ -1.71
SPG4YMR107W REC104P33323 182 aa4.36□□□□□ -1.71
SPG4YMR107W CMC1P36064 111 aa4.36□□□□□ -1.71
SPG4YMR107W CSH1P38287 376 aa4.36□□□□□ -1.71
SPG4YMR107W YGP1P38616 354 aaKnown RBP4.36□□□□□ -1.71
SPG4YMR107W YHR173CP38864 112 aa4.36□□□□□ -1.71
SPG4YMR107W LYS1P38998 373 aaRIP-Chip data4.36□□□□□ -1.71not detected
SPG4YMR107W OSW5P40219 148 aa4.36□□□□□ -1.71
SPG4YMR107W YFL065CP43539 102 aa4.36□□□□□ -1.71
SPG4YMR107W YAR1P46683 200 aa4.36□□□□□ -1.71
SPG4YMR107W YGR045CP53229 120 aa4.36□□□□□ -1.71
SPG4YMR107W WSC2P53832 503 aa4.36□□□□□ -1.71
SPG4YMR107W MRX11Q03079 207 aa4.36□□□□□ -1.71
SPG4YMR107W RAV2Q03956 351 aa4.36□□□□□ -1.71
SPG4YMR107W DGA1Q08650 418 aa4.36□□□□□ -1.71
SPG4YMR107W YPR203WQ08994 102 aa4.36□□□□□ -1.71
SPG4YMR107W NCE102Q12207 173 aaRIP-Chip data4.36□□□□□ -1.71not detected
SPG4YMR107W JID1Q12350 301 aa4.36□□□□□ -1.71
SPG4YMR107W WIP1Q2V2P8 89 aa4.36□□□□□ -1.71
SPG4YMR107W YPT1P01123 206 aaKnown RBP4.35□□□□□ -1.71
SPG4YMR107W HEM4P06174 275 aa4.35□□□□□ -1.71
SPG4YMR107W ARF1P11076 181 aaKnown RBP4.35□□□□□ -1.71
SPG4YMR107W KRE1P17260 313 aa4.35□□□□□ -1.71
SPG4YMR107W ROX3P25046 220 aa4.35□□□□□ -1.71
SPG4YMR107W OST2P46964 130 aa4.35□□□□□ -1.71
SPG4YMR107W SDS23P53172 527 aa4.35□□□□□ -1.71
SPG4YMR107W DYN2Q02647 92 aa4.35□□□□□ -1.71
SPG4YMR107W TRS23Q03784 219 aa4.35□□□□□ -1.71
SPG4YMR107W YDL218WQ07629 317 aa4.35□□□□□ -1.71
SPG4YMR107W YIR021W-AQ3E739 70 aa4.35□□□□□ -1.71
SPG4YMR107W YOR304C-AO14468 76 aa4.34□□□□□ -1.71
SPG4YMR107W MDM10P18409 493 aa4.34□□□□□ -1.71
SPG4YMR107W IMP1P28627 190 aa4.34□□□□□ -1.71
SPG4YMR107W YKL044WP36092 106 aa4.34□□□□□ -1.71
SPG4YMR107W YKR041WP36134 250 aa4.34□□□□□ -1.71
SPG4YMR107W YPL073CP40323 161 aa4.34□□□□□ -1.71
SPG4YMR107W OST1P41543 476 aaKnown RBP4.34□□□□□ -1.71
SPG4YMR107W YPI1P43587 155 aa4.34□□□□□ -1.71
SPG4YMR107W YFR045WP43617 309 aa4.34□□□□□ -1.71
SPG4YMR107W YNR077CP53758 84 aa4.34□□□□□ -1.71
SPG4YMR107W SUR7P54003 302 aa4.34□□□□□ -1.71
SPG4YMR107W YHP1Q04116 353 aa4.34□□□□□ -1.71
SPG4YMR107W YFH1Q07540 174 aa4.34□□□□□ -1.71
SPG4YMR107W FIT2Q08906 153 aa4.34□□□□□ -1.71
SPG4YMR107W YIL046W-AQ3E7Z4 54 aa4.34□□□□□ -1.71
SPG4YMR107W VPS63O13549 108 aa4.33□□□□□ -1.72
SPG4YMR107W TOM40P23644 387 aaKnown RBP4.33□□□□□ -1.72
SPG4YMR107W YOX1P34161 385 aa4.33□□□□□ -1.72
SPG4YMR107W TOM7P53507 60 aa4.33□□□□□ -1.72
SPG4YMR107W SUN4P53616 420 aa4.33□□□□□ -1.72
SPG4YMR107W YLR460CP54007 376 aa4.33□□□□□ -1.72
SPG4YMR107W YMR210WQ03649 449 aa4.33□□□□□ -1.72
SPG4YMR107W ECM18Q04623 453 aa4.33□□□□□ -1.72
SPG4YMR107W NIP7Q08962 181 aaKnown RBP4.33□□□□□ -1.72
SPG4YMR107W RPL7BQ12213 244 aaKnown RBP4.33□□□□□ -1.72
SPG4YMR107W YLR302CO13544 120 aa4.32□□□□□ -1.72
SPG4YMR107W INO4P13902 151 aa4.32□□□□□ -1.72
SPG4YMR107W PHO85P17157 305 aa4.32□□□□□ -1.72
SPG4YMR107W YMR31P19955 123 aa4.32□□□□□ -1.72
SPG4YMR107W ERG8P24521 451 aa4.32□□□□□ -1.72
SPG4YMR107W FPR2P32472 135 aa4.32□□□□□ -1.72
SPG4YMR107W YKR032WP36127 104 aa4.32□□□□□ -1.72
SPG4YMR107W GPI18P38211 433 aa4.32□□□□□ -1.72
SPG4YMR107W LST8P41318 303 aa4.32□□□□□ -1.72
SPG4YMR107W SPG5P42933 373 aa4.32□□□□□ -1.72
SPG4YMR107W EOS1P53938 366 aa4.32□□□□□ -1.72
SPG4YMR107W MOT3P54785 490 aaKnown RBP4.32□□□□□ -1.72
SPG4YMR107W YLR112WQ12130 139 aa4.32□□□□□ -1.72
SPG4YMR107W FOL3Q12676 427 aaPredicted RBP4.32□□□□□ -1.72
SPG4YMR107W YGL258W-AQ3E740 77 aa4.32□□□□□ -1.72
SPG4YMR107W YAL064W-BO13512 126 aa4.31□□□□□ -1.72
SPG4YMR107W YSF3P0C074 85 aaPredicted RBP4.31□□□□□ -1.72
SPG4YMR107W RPS26BP39939 119 aaKnown RBP4.31□□□□□ -1.72
Retrieved 100 of 5,963 RNA–protein pairs in 8.1 ms