RNA–Protein interactions for RNA: YLR396C

VPS33, Transcript of ATP-binding protein that is a subunit of the HOPS and CORVET complexes, yeastyeast

Gene VPS33, Length 2,076 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS33YLR396C YOR105WQ08504 108 aa2.68□□□□□ -1.98
VPS33YLR396C MSB2P32334 1306 aa2.68□□□□□ -1.98
VPS33YLR396C POX1P13711 748 aa2.67□□□□□ -1.98
VPS33YLR396C STE18P18852 110 aa2.67□□□□□ -1.98
VPS33YLR396C MDH2P22133 377 aa2.67□□□□□ -1.98
VPS33YLR396C ERG2P32352 222 aa2.67□□□□□ -1.98
VPS33YLR396C SWD2P36104 329 aaPredicted RBP2.67□□□□□ -1.98
VPS33YLR396C TAE1P38340 232 aa2.67□□□□□ -1.98
VPS33YLR396C YNL208WP40159 199 aaKnown RBP2.67□□□□□ -1.98
VPS33YLR396C KEG1P43614 200 aa2.67□□□□□ -1.98
VPS33YLR396C CAB4P53332 305 aa2.67□□□□□ -1.98
VPS33YLR396C GRH1Q04410 372 aaKnown RBP2.67□□□□□ -1.98
VPS33YLR396C PRP11Q07350 266 aaPredicted RBP2.67□□□□□ -1.98
VPS33YLR396C PRM3Q08931 133 aa2.67□□□□□ -1.98
VPS33YLR396C UTP23Q12339 254 aaKnown RBP2.67□□□□□ -1.98
VPS33YLR396C YDR157WA0A023PZE8 133 aa2.67□□□□□ -1.98
VPS33YLR396C SEC4P07560 215 aaKnown RBP2.67□□□□□ -1.98
VPS33YLR396C CTA1P15202 515 aa2.67□□□□□ -1.98
VPS33YLR396C PCL1P24867 279 aa2.67□□□□□ -1.98
VPS33YLR396C FYV4P38783 130 aaPredicted RBP2.67□□□□□ -1.98
VPS33YLR396C SRP14P38985 146 aa2.67□□□□□ -1.98
VPS33YLR396C MOB1P40484 314 aa2.67□□□□□ -1.98
VPS33YLR396C DFG10P40526 253 aa2.67□□□□□ -1.98
VPS33YLR396C HAL1Q01766 294 aa2.67□□□□□ -1.98
VPS33YLR396C DYN2Q02647 92 aa2.67□□□□□ -1.98
VPS33YLR396C LPP1Q04396 274 aa2.67□□□□□ -1.98
VPS33YLR396C ARC18Q05933 178 aaKnown RBP2.67□□□□□ -1.98
VPS33YLR396C FOL3Q12676 427 aaPredicted RBP2.67□□□□□ -1.98
VPS33YLR396C ISD11Q6Q560 94 aa2.67□□□□□ -1.98
VPS33YLR396C SOD1P00445 154 aaKnown RBP2.66□□□□□ -1.98
VPS33YLR396C YLL053CP0CD98 152 aa2.66□□□□□ -1.98
VPS33YLR396C RPS16AP0CX51 143 aaKnown RBP2.66□□□□□ -1.98
VPS33YLR396C RPS16BP0CX52 143 aaKnown RBP2.66□□□□□ -1.98
VPS33YLR396C INO4P13902 151 aa2.66□□□□□ -1.98
VPS33YLR396C ARF2P19146 181 aaKnown RBP2.66□□□□□ -1.98
VPS33YLR396C HYP2P23301 157 aaKnown RBP2.66□□□□□ -1.98
VPS33YLR396C RAD23P32628 398 aaKnown RBP2.66□□□□□ -1.98
VPS33YLR396C UGX2P32772 223 aa2.66□□□□□ -1.98
VPS33YLR396C ERJ5P43613 295 aaPredicted RBP2.66□□□□□ -1.98
VPS33YLR396C GPI2P46961 280 aa2.66□□□□□ -1.98
VPS33YLR396C YPL039WQ03080 316 aa2.66□□□□□ -1.98
VPS33YLR396C LIP2Q06005 328 aa2.66□□□□□ -1.98
VPS33YLR396C YIL102C-AQ2V2P5 75 aa2.66□□□□□ -1.98
VPS33YLR396C STF1P01098 86 aa2.65□□□□□ -1.98
VPS33YLR396C RPS22AP0C0W1 130 aaKnown RBP2.65□□□□□ -1.98
VPS33YLR396C RPL35AP0CX84 120 aaKnown RBP2.65□□□□□ -1.98
VPS33YLR396C RPL35BP0CX85 120 aaKnown RBP2.65□□□□□ -1.98
VPS33YLR396C CUP2P15315 225 aa2.65□□□□□ -1.98
VPS33YLR396C YSR3P23501 404 aa2.65□□□□□ -1.98
VPS33YLR396C YHR130CP38834 111 aa2.65□□□□□ -1.98
VPS33YLR396C YHR138CP38841 114 aaPredicted RBP2.65□□□□□ -1.98
VPS33YLR396C EAF6P47128 113 aa2.65□□□□□ -1.98
VPS33YLR396C BRR6P53062 197 aa2.65□□□□□ -1.98
VPS33YLR396C MCP1Q12106 302 aa2.65□□□□□ -1.98
VPS33YLR396C SMT3Q12306 101 aaKnown RBP2.65□□□□□ -1.98
VPS33YLR396C GEP5Q12393 293 aa2.65□□□□□ -1.98
VPS33YLR396C YLR361C-AQ3E795 98 aa2.65□□□□□ -1.98
VPS33YLR396C RFA3P26755 122 aaKnown RBP2.65□□□□□ -1.99
VPS33YLR396C UTH1P36135 365 aa2.65□□□□□ -1.99
VPS33YLR396C YBR090CP38253 122 aa2.65□□□□□ -1.99
VPS33YLR396C YIL163CP40448 117 aa2.65□□□□□ -1.99
VPS33YLR396C YFL065CP43539 102 aa2.65□□□□□ -1.99
VPS33YLR396C AQR1P53943 586 aa2.65□□□□□ -1.99
VPS33YLR396C PET191Q02772 108 aa2.65□□□□□ -1.99
VPS33YLR396C YMR007WQ03675 126 aa2.65□□□□□ -1.99
VPS33YLR396C RIM9Q04734 239 aa2.65□□□□□ -1.99
VPS33YLR396C YPR203WQ08994 102 aa2.65□□□□□ -1.99
VPS33YLR396C YIR021W-AQ3E739 70 aa2.65□□□□□ -1.99
VPS33YLR396C RPS22BQ3E7Y3 130 aaKnown RBP2.65□□□□□ -1.99
VPS33YLR396C CDC36P06100 191 aaPredicted RBP2.64□□□□□ -1.99
VPS33YLR396C FCY2P17064 533 aa2.64□□□□□ -1.99
VPS33YLR396C SAG1P20840 650 aa2.64□□□□□ -1.99
VPS33YLR396C QCR9P22289 66 aa2.64□□□□□ -1.99
VPS33YLR396C ZRT1P32804 376 aa2.64□□□□□ -1.99
VPS33YLR396C YNL200CP40165 246 aaKnown RBP2.64□□□□□ -1.99
VPS33YLR396C YGR269WP40326 108 aa2.64□□□□□ -1.99
VPS33YLR396C TDA4P47153 279 aa2.64□□□□□ -1.99
VPS33YLR396C CPD1P53314 239 aa2.64□□□□□ -1.99
VPS33YLR396C SWT21P53873 357 aaPredicted RBP2.64□□□□□ -1.99
VPS33YLR396C YML079WQ03629 201 aa2.64□□□□□ -1.99
VPS33YLR396C YPL264CQ08980 353 aa2.64□□□□□ -1.99
VPS33YLR396C POC4Q12245 148 aaPredicted RBP2.64□□□□□ -1.99
VPS33YLR396C YKR104WP0CE69 306 aa2.64□□□□□ -1.99
VPS33YLR396C COX10P21592 462 aa2.64□□□□□ -1.99
VPS33YLR396C YCR023CP25351 611 aa2.64□□□□□ -1.99
VPS33YLR396C RPL16AP26784 199 aaKnown RBP2.64□□□□□ -1.99
VPS33YLR396C SRP21P32342 167 aa2.64□□□□□ -1.99
VPS33YLR396C YUH1P35127 236 aa2.64□□□□□ -1.99
VPS33YLR396C YOR062CP36025 268 aa2.64□□□□□ -1.99
VPS33YLR396C FRM2P37261 193 aa2.64□□□□□ -1.99
VPS33YLR396C DOG2P38773 246 aa2.64□□□□□ -1.99
VPS33YLR396C ECM14P38836 430 aa2.64□□□□□ -1.99
VPS33YLR396C MIC27P50945 234 aa2.64□□□□□ -1.99
VPS33YLR396C MPP6P53725 186 aaPredicted RBP2.64□□□□□ -1.99
VPS33YLR396C YPR098CQ06089 161 aa2.64□□□□□ -1.99
VPS33YLR396C YGP1P38616 354 aaKnown RBP2.63□□□□□ -1.99
VPS33YLR396C WSC4P38739 605 aa2.63□□□□□ -1.99
VPS33YLR396C YAR068WP39564 161 aa2.63□□□□□ -1.99
VPS33YLR396C COX15P40086 486 aa2.63□□□□□ -1.99
VPS33YLR396C CYB5P40312 120 aa2.63□□□□□ -1.99
Retrieved 100 of 5,963 RNA–protein pairs in 16.4 ms