RNA–Protein interactions for RNA: YLR320W

MMS22, Transcript of Subunit of E3 ubiquitin ligase complex involved in replication repair, yeastyeast

Gene MMS22, Length 4,365 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MMS22YLR320W DDR48P18899 430 aaKnown RBP1.11□□□□□ -2.23
MMS22YLR320W YOR062CP36025 268 aa1.11□□□□□ -2.23
MMS22YLR320W SER2P42941 309 aa1.11□□□□□ -2.23
MMS22YLR320W MZM1Q03429 123 aaPredicted RBP1.11□□□□□ -2.23
MMS22YLR320W BOL1Q3E793 110 aa1.11□□□□□ -2.23
MMS22YLR320W AHC2P25649 128 aa1.1□□□□□ -2.23
MMS22YLR320W SRX1P36077 127 aa1.1□□□□□ -2.23
MMS22YLR320W YGR042WP53227 271 aa1.1□□□□□ -2.23
MMS22YLR320W YMR295CQ03559 197 aa1.1□□□□□ -2.23
MMS22YLR320W THI74Q04083 370 aa1.1□□□□□ -2.23
MMS22YLR320W RPL9AP05738 191 aaKnown RBP1.1□□□□□ -2.23
MMS22YLR320W YFL019CP43576 117 aa1.1□□□□□ -2.23
MMS22YLR320W RPL9BP51401 191 aaKnown RBP1.1□□□□□ -2.23
MMS22YLR320W RGM1Q00453 211 aa1.1□□□□□ -2.23
MMS22YLR320W YMR315WQ04869 349 aaKnown RBP1.1□□□□□ -2.23
MMS22YLR320W FIP1P45976 327 aa1.1□□□□□ -2.23
MMS22YLR320W EMC4P53073 190 aa1.1□□□□□ -2.23
MMS22YLR320W YMR082CQ04276 118 aa1.1□□□□□ -2.23
MMS22YLR320W MED11Q99278 115 aa1.1□□□□□ -2.23
MMS22YLR320W JIP3O13555 125 aa1.09□□□□□ -2.23
MMS22YLR320W SHE2P36068 246 aaKnown RBP RIP-Chip data1.09□□□□□ -2.23not detected
MMS22YLR320W SAY1P53324 424 aa1.09□□□□□ -2.23
MMS22YLR320W YNL010WP53981 241 aaKnown RBP1.09□□□□□ -2.23
MMS22YLR320W YDC1Q02896 317 aa1.09□□□□□ -2.23
MMS22YLR320W RAV2Q03956 351 aa1.09□□□□□ -2.23
MMS22YLR320W GPI17Q04080 534 aa1.09□□□□□ -2.23
MMS22YLR320W MDN1Q12019 4910 aaKnown RBP1.09□□□□□ -2.23
MMS22YLR320W PHO13P19881 312 aa1.09□□□□□ -2.23
MMS22YLR320W IDP1P21954 428 aaKnown RBP1.09□□□□□ -2.23
MMS22YLR320W ARO7P32178 256 aa1.09□□□□□ -2.23
MMS22YLR320W UPS2P35200 230 aa1.09□□□□□ -2.23
MMS22YLR320W FMN1Q03778 218 aa1.09□□□□□ -2.23
MMS22YLR320W TRA1P38811 3744 aa1.09□□□□□ -2.24
MMS22YLR320W MRPL17P36528 281 aa1.09□□□□□ -2.24
MMS22YLR320W YEA4P40004 342 aa1.09□□□□□ -2.24
MMS22YLR320W DGK1Q12382 290 aa1.09□□□□□ -2.24
MMS22YLR320W SCS22Q6Q595 175 aa1.09□□□□□ -2.24
MMS22YLR320W HAP2P06774 265 aa1.08□□□□□ -2.24
MMS22YLR320W HYP2P23301 157 aaKnown RBP1.08□□□□□ -2.24
MMS22YLR320W HSP150P32478 413 aa1.08□□□□□ -2.24
MMS22YLR320W VTC1P40046 129 aaRIP-Chip data1.08□□□□□ -2.24not detected
MMS22YLR320W EST3Q03096 181 aa1.08□□□□□ -2.24
MMS22YLR320W YOR192C-CQ3E736 78 aa1.08□□□□□ -2.24
MMS22YLR320W RAD6P06104 172 aa1.08□□□□□ -2.24
MMS22YLR320W MAK31P23059 88 aa1.08□□□□□ -2.24
MMS22YLR320W SRP21P32342 167 aa1.08□□□□□ -2.24
MMS22YLR320W NKP2Q06162 153 aa1.08□□□□□ -2.24
MMS22YLR320W RFC2P40348 353 aa1.08□□□□□ -2.24
MMS22YLR320W UBC12P52491 188 aa1.08□□□□□ -2.24
MMS22YLR320W UPS1Q05776 175 aa1.08□□□□□ -2.24
MMS22YLR320W SPC3Q12133 184 aa1.08□□□□□ -2.24
MMS22YLR320W YDR524C-BQ3E6R4 66 aa1.08□□□□□ -2.24
MMS22YLR320W NRG2P38082 220 aa1.08□□□□□ -2.24
MMS22YLR320W HTD2P38790 280 aaKnown RBP1.08□□□□□ -2.24
MMS22YLR320W IRC22P40006 225 aa1.08□□□□□ -2.24
MMS22YLR320W YET3Q07451 203 aa1.08□□□□□ -2.24
MMS22YLR320W MEU1Q07938 337 aaKnown RBP RIP-Chip data1.08□□□□□ -2.24not detected
MMS22YLR320W PSF1Q12488 208 aa1.08□□□□□ -2.24
MMS22YLR320W URA5P13298 226 aaKnown RBP1.07□□□□□ -2.24
MMS22YLR320W SVP26P38869 228 aa1.07□□□□□ -2.24
MMS22YLR320W BUD25P85052 153 aa1.07□□□□□ -2.24
MMS22YLR320W SML1Q04964 104 aa1.07□□□□□ -2.24
MMS22YLR320W RAD28Q12021 506 aa1.07□□□□□ -2.24
MMS22YLR320W CLG1P35190 452 aa1.07□□□□□ -2.24
MMS22YLR320W YHR022CP38763 256 aa1.07□□□□□ -2.24
MMS22YLR320W LSM3P57743 89 aaKnown RBP1.07□□□□□ -2.24
MMS22YLR320W LCL1Q02786 101 aa1.07□□□□□ -2.24
MMS22YLR320W NEJ1Q06148 342 aa1.07□□□□□ -2.24
MMS22YLR320W YEL028WP39989 153 aa1.07□□□□□ -2.24
MMS22YLR320W DAN1P47178 298 aa1.07□□□□□ -2.24
MMS22YLR320W RPB3P16370 318 aaKnown RBP1.06□□□□□ -2.24
MMS22YLR320W YBL010CP32788 280 aa1.06□□□□□ -2.24
MMS22YLR320W POP7P38291 140 aa1.06□□□□□ -2.24
MMS22YLR320W YNL200CP40165 246 aaKnown RBP1.06□□□□□ -2.24
MMS22YLR320W TIM13P53299 105 aa1.06□□□□□ -2.24
MMS22YLR320W PEX4P29340 183 aa1.06□□□□□ -2.24
MMS22YLR320W YHR140WP38842 239 aa1.06□□□□□ -2.24
MMS22YLR320W YHR180WP38868 163 aa1.06□□□□□ -2.24
MMS22YLR320W RPL33BP41056 107 aaKnown RBP1.06□□□□□ -2.24
MMS22YLR320W RCE1Q03530 315 aa1.06□□□□□ -2.24
MMS22YLR320W RDI1Q12434 202 aa1.06□□□□□ -2.24
MMS22YLR320W MHF1Q3E835 90 aa1.06□□□□□ -2.24
MMS22YLR320W YLR412C-AQ3E742 68 aa1.06□□□□□ -2.24
MMS22YLR320W PHB1P40961 287 aa1.05□□□□□ -2.24
MMS22YLR320W SPC1P46965 94 aa1.05□□□□□ -2.24
MMS22YLR320W LSM1P47017 172 aaKnown RBP1.05□□□□□ -2.24
MMS22YLR320W MRPS8Q03799 155 aa1.05□□□□□ -2.24
MMS22YLR320W UPS3Q04006 179 aa1.05□□□□□ -2.24
MMS22YLR320W CYR1P08678 2026 aaKnown RBP1.05□□□□□ -2.24
MMS22YLR320W XPT1P47165 209 aa1.05□□□□□ -2.24
MMS22YLR320W TMA20P89886 181 aaPredicted RBP1.05□□□□□ -2.24
MMS22YLR320W YBR032WP38223 100 aa1.05□□□□□ -2.24
MMS22YLR320W PHO88P38264 188 aaPredicted RBP1.05□□□□□ -2.24
MMS22YLR320W SWP1Q02795 286 aa1.05□□□□□ -2.24
MMS22YLR320W RPL22BP56628 122 aaKnown RBP1.05□□□□□ -2.24
MMS22YLR320W YPD1Q07688 167 aa1.05□□□□□ -2.24
MMS22YLR320W YPR013CQ12145 317 aa1.05□□□□□ -2.24
MMS22YLR320W SLO1Q3E784 85 aa1.05□□□□□ -2.24
MMS22YLR320W STF2P16965 84 aa1.04□□□□□ -2.24
MMS22YLR320W SUI1P32911 108 aaKnown RBP1.04□□□□□ -2.24
Retrieved 100 of 5,963 RNA–protein pairs in 22 ms