RNA–Protein interactions for RNA: YLR221C

RSA3, Transcript of Protein with a likely role in ribosomal maturation, yeast

Gene RSA3, Length 663 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RSA3	YLR221C	DDR48	P18899	430 aa	Known RBP	2.53	□□□□□ -2
RSA3	YLR221C	SHB17	P36136	271 aa	Known RBP	2.53	□□□□□ -2
RSA3	YLR221C	GLC8	P41818	229 aa		2.53	□□□□□ -2
RSA3	YLR221C	RBL2	P48606	106 aa	Known RBP	2.53	□□□□□ -2
RSA3	YLR221C	KEI1	Q06346	221 aa		2.53	□□□□□ -2
RSA3	YLR221C	APS3	P47064	194 aa		2.52	□□□□□ -2.01
RSA3	YLR221C	EST3	Q03096	181 aa		2.52	□□□□□ -2.01
RSA3	YLR221C	CYR1	P08678	2026 aa	Known RBP	2.52	□□□□□ -2.01
RSA3	YLR221C	HSP12	P22943	109 aa	Known RBP	2.51	□□□□□ -2.01
RSA3	YLR221C	YEL014C	P39999	101 aa		2.51	□□□□□ -2.01
RSA3	YLR221C	YDR366C	P87287	132 aa		2.51	□□□□□ -2.01
RSA3	YLR221C	SCS22	Q6Q595	175 aa		2.51	□□□□□ -2.01
RSA3	YLR221C	TAF2	P23255	1407 aa		2.51	□□□□□ -2.01
RSA3	YLR221C	GPI2	P46961	280 aa		2.5	□□□□□ -2.01
RSA3	YLR221C	IRC19	Q07843	230 aa		2.5	□□□□□ -2.01
RSA3	YLR221C	KIN28	P06242	306 aa		2.49	□□□□□ -2.01
RSA3	YLR221C	YKR070W	P36151	352 aa	Known RBP	2.49	□□□□□ -2.01
RSA3	YLR221C	ECM31	P38122	312 aa		2.49	□□□□□ -2.01
RSA3	YLR221C	YMR320W	Q04897	101 aa		2.49	□□□□□ -2.01
RSA3	YLR221C	YHL037C	P38733	133 aa		2.48	□□□□□ -2.01
RSA3	YLR221C	YFL051C	P43552	160 aa		2.48	□□□□□ -2.01
RSA3	YLR221C	RPC19	P28000	142 aa	Known RBP	2.47	□□□□□ -2.01
RSA3	YLR221C	CMC4	Q3E7A9	73 aa		2.47	□□□□□ -2.01
RSA3	YLR221C	DUR1,2	P32528	1835 aa	Known RBP	2.47	□□□□□ -2.01
RSA3	YLR221C	DCV1	P43595	202 aa		2.46	□□□□□ -2.02
RSA3	YLR221C	COF1	Q03048	143 aa	Known RBP	2.46	□□□□□ -2.02
RSA3	YLR221C	SUI1	P32911	108 aa	Known RBP	2.45	□□□□□ -2.02
RSA3	YLR221C	VMA10	P48836	114 aa	Known RBP	2.45	□□□□□ -2.02
RSA3	YLR221C	HHO1	P53551	258 aa		2.45	□□□□□ -2.02
RSA3	YLR221C	HSP150	P32478	413 aa		2.44	□□□□□ -2.02
RSA3	YLR221C	YGR201C	P42936	225 aa		2.44	□□□□□ -2.02
RSA3	YLR221C	YGR039W	P53225	103 aa		2.44	□□□□□ -2.02
RSA3	YLR221C	VAM10	Q08474	114 aa		2.44	□□□□□ -2.02
RSA3	YLR221C	FCY1	Q12178	158 aa		2.44	□□□□□ -2.02
RSA3	YLR221C	YPR153W	Q06537	140 aa		2.43	□□□□□ -2.02
RSA3	YLR221C	IPT1	P38954	527 aa		2.42	□□□□□ -2.02
RSA3	YLR221C	HYP2	P23301	157 aa	Known RBP	2.41	□□□□□ -2.02
RSA3	YLR221C	HUA1	P40325	198 aa		2.41	□□□□□ -2.02
RSA3	YLR221C	YBR027C	P38220	110 aa		2.4	□□□□□ -2.03
RSA3	YLR221C	GPI11	Q06636	219 aa		2.39	□□□□□ -2.03
RSA3	YLR221C	ACC1	Q00955	2233 aa	Known RBP	2.39	□□□□□ -2.03
RSA3	YLR221C	YAR064W	P39563	99 aa		2.38	□□□□□ -2.03
RSA3	YLR221C	SPG1	P50088	95 aa		2.38	□□□□□ -2.03
RSA3	YLR221C	CSN9	Q03981	162 aa		2.38	□□□□□ -2.03
RSA3	YLR221C	SPC3	Q12133	184 aa		2.38	□□□□□ -2.03
RSA3	YLR221C	NHP6A	P11632	93 aa	Known RBP	2.37	□□□□□ -2.03
RSA3	YLR221C	LSM8	P47093	109 aa	Known RBP	2.37	□□□□□ -2.03
RSA3	YLR221C	COX5B	P00425	151 aa		2.36	□□□□□ -2.03
RSA3	YLR221C	DIE2	P50076	525 aa		2.36	□□□□□ -2.03
RSA3	YLR221C	YCL001W-A	P87012	153 aa		2.36	□□□□□ -2.03
RSA3	YLR221C	RPS1B	P23248	255 aa	Known RBP	2.35	□□□□□ -2.03
RSA3	YLR221C	CYC2	P38909	366 aa		2.35	□□□□□ -2.03
RSA3	YLR221C	YIL102C	P40488	101 aa		2.35	□□□□□ -2.03
RSA3	YLR221C	PHB1	P40961	287 aa		2.35	□□□□□ -2.03
RSA3	YLR221C	LCL2	Q08045	131 aa		2.35	□□□□□ -2.03
RSA3	YLR221C	HUT1	Q12520	339 aa		2.35	□□□□□ -2.03
RSA3	YLR221C	RIB3	Q99258	208 aa		2.35	□□□□□ -2.03
RSA3	YLR221C	FYV5	P25585	152 aa		2.34	□□□□□ -2.03
RSA3	YLR221C	ATG8	P38182	117 aa	RIP-Chip data	2.34	□□□□□ -2.03	not detected
RSA3	YLR221C	RAF1	Q06891	181 aa		2.34	□□□□□ -2.03
RSA3	YLR221C	CCW12	Q12127	133 aa		2.34	□□□□□ -2.03
RSA3	YLR221C	YHR140W	P38842	239 aa		2.33	□□□□□ -2.04
RSA3	YLR221C	RPL37A	P49166	88 aa	Known RBP	2.33	□□□□□ -2.04
RSA3	YLR221C	EMC4	P53073	190 aa		2.32	□□□□□ -2.04
RSA3	YLR221C	YNL019C	P53975	284 aa		2.32	□□□□□ -2.04
RSA3	YLR221C	SOM1	Q05676	74 aa		2.32	□□□□□ -2.04
RSA3	YLR221C	DDP1	Q99321	188 aa	Known RBP	2.32	□□□□□ -2.04
RSA3	YLR221C	YGL204C	P53089	101 aa		2.31	□□□□□ -2.04
RSA3	YLR221C	YGR042W	P53227	271 aa		2.31	□□□□□ -2.04
RSA3	YLR221C	SED1	Q01589	338 aa		2.31	□□□□□ -2.04
RSA3	YLR221C	MHF1	Q3E835	90 aa		2.31	□□□□□ -2.04
RSA3	YLR221C	GIM4	P40005	111 aa	Known RBP	2.3	□□□□□ -2.04
RSA3	YLR221C	TMA23	Q03525	211 aa		2.29	□□□□□ -2.04
RSA3	YLR221C	NAT5	Q08689	176 aa		2.29	□□□□□ -2.04
RSA3	YLR221C	YOR385W	Q08909	290 aa		2.29	□□□□□ -2.04
RSA3	YLR221C	RPL33A	P05744	107 aa	Known RBP	2.28	□□□□□ -2.04
RSA3	YLR221C	ATP14	Q12349	124 aa		2.28	□□□□□ -2.04
RSA3	YLR221C	SUA7	P29055	345 aa	Predicted RBP	2.27	□□□□□ -2.05
RSA3	YLR221C	SPC2	Q04969	178 aa		2.27	□□□□□ -2.05
RSA3	YLR221C	MRPL44	P19956	98 aa		2.26	□□□□□ -2.05
RSA3	YLR221C	UGX2	P32772	223 aa		2.26	□□□□□ -2.05
RSA3	YLR221C	RPS1A	P33442	255 aa	Known RBP	2.26	□□□□□ -2.05
RSA3	YLR221C	RPL14A	P36105	138 aa	Known RBP	2.26	□□□□□ -2.05
RSA3	YLR221C	RPL14B	P38754	138 aa	Known RBP	2.26	□□□□□ -2.05
RSA3	YLR221C	HPM1	P40481	377 aa		2.26	□□□□□ -2.05
RSA3	YLR221C	ELC1	Q03071	99 aa		2.26	□□□□□ -2.05
RSA3	YLR221C	SEN15	Q04675	128 aa		2.26	□□□□□ -2.05
RSA3	YLR221C	YCR001W	P25347	104 aa		2.25	□□□□□ -2.05
RSA3	YLR221C	ACP1	P32463	125 aa		2.25	□□□□□ -2.05
RSA3	YLR221C	SRL3	P36167	246 aa		2.25	□□□□□ -2.05
RSA3	YLR221C	POP7	P38291	140 aa		2.25	□□□□□ -2.05
RSA3	YLR221C	YGR017W	P53210	297 aa		2.25	□□□□□ -2.05
RSA3	YLR221C	YGL014C-A	P0C5N1	53 aa		2.23	□□□□□ -2.05
RSA3	YLR221C	YNL122C	P53921	115 aa	Predicted RBP	2.23	□□□□□ -2.05
RSA3	YLR221C	YNL277W-A	Q3E7Z0	62 aa		2.23	□□□□□ -2.05
RSA3	YLR221C	FMP49	A0A023PZB3	126 aa		2.22	□□□□□ -2.05
RSA3	YLR221C	YOL013W-A	P0C272	63 aa	Predicted RBP	2.22	□□□□□ -2.05
RSA3	YLR221C	YCR050C	P25630	102 aa		2.22	□□□□□ -2.05
RSA3	YLR221C	SFT2	P38166	215 aa		2.22	□□□□□ -2.05
RSA3	YLR221C	YDR278C	Q05612	105 aa		2.22	□□□□□ -2.05

Retrieved 100 of 5,963 RNA–protein pairs in 76.8 ms