RNA–Protein interactions for RNA: YLR219W

MSC3, Transcript of Protein of unknown function, yeast

Gene MSC3, Length 2,187 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
MSC3	YLR219W	YER190C-B	P0CX94	160 aa		5.28	□□□□□ -1.56
MSC3	YLR219W	YEL077W-A	P0CX95	160 aa		5.28	□□□□□ -1.56
MSC3	YLR219W	YGR296C-B	P0CX96	160 aa		5.28	□□□□□ -1.56
MSC3	YLR219W	YPL283W-B	P0CX97	160 aa		5.28	□□□□□ -1.56
MSC3	YLR219W	YPR204C-A	P0CX98	160 aa		5.28	□□□□□ -1.56
MSC3	YLR219W	YFL068W	P0CX99	160 aa		5.28	□□□□□ -1.56
MSC3	YLR219W	YLL066W-A	P0CY00	160 aa		5.28	□□□□□ -1.56
MSC3	YLR219W	YLL067W-A	P0CY01	160 aa		5.28	□□□□□ -1.56
MSC3	YLR219W	RPS2	P25443	254 aa	Known RBP	5.28	□□□□□ -1.56
MSC3	YLR219W	IMP2	P46972	177 aa		5.28	□□□□□ -1.56
MSC3	YLR219W	YDL186W	P48568	277 aa		5.28	□□□□□ -1.56
MSC3	YLR219W	SNO1	Q03144	224 aa		5.28	□□□□□ -1.56
MSC3	YLR219W	PCC1	Q3E833	88 aa		5.27	□□□□□ -1.57
MSC3	YLR219W	PRY2	P36110	329 aa		5.26	□□□□□ -1.57
MSC3	YLR219W	TIM21	P53220	239 aa		5.26	□□□□□ -1.57
MSC3	YLR219W	YNR071C	P53757	342 aa		5.26	□□□□□ -1.57
MSC3	YLR219W	DIF1	O13577	133 aa		5.26	□□□□□ -1.57
MSC3	YLR219W	YNL194C	P40169	301 aa		5.26	□□□□□ -1.57
MSC3	YLR219W	HAM1	P47119	197 aa	Known RBP	5.26	□□□□□ -1.57
MSC3	YLR219W	OCA2	P53949	197 aa		5.26	□□□□□ -1.57
MSC3	YLR219W	GTO3	Q04806	366 aa		5.26	□□□□□ -1.57
MSC3	YLR219W	YPR013C	Q12145	317 aa		5.26	□□□□□ -1.57
MSC3	YLR219W	CNB1	P25296	175 aa		5.25	□□□□□ -1.57
MSC3	YLR219W	POR2	P40478	281 aa		5.25	□□□□□ -1.57
MSC3	YLR219W	RPA43	P46669	326 aa		5.25	□□□□□ -1.57
MSC3	YLR219W	LOA1	Q06508	300 aa		5.25	□□□□□ -1.57
MSC3	YLR219W	LDS2	Q08218	356 aa		5.25	□□□□□ -1.57
MSC3	YLR219W	FIT2	Q08906	153 aa		5.25	□□□□□ -1.57
MSC3	YLR219W	RNA15	P25299	296 aa	Predicted RBP	5.25	□□□□□ -1.57
MSC3	YLR219W	YKL102C	P34249	101 aa		5.25	□□□□□ -1.57
MSC3	YLR219W	DAD2	P36162	133 aa		5.25	□□□□□ -1.57
MSC3	YLR219W	HSP12	P22943	109 aa	Known RBP	5.24	□□□□□ -1.57
MSC3	YLR219W	PHS1	P40857	217 aa		5.24	□□□□□ -1.57
MSC3	YLR219W	CIN5	P40917	295 aa		5.24	□□□□□ -1.57
MSC3	YLR219W	BNS1	P50084	137 aa		5.24	□□□□□ -1.57
MSC3	YLR219W	PRM3	Q08931	133 aa		5.24	□□□□□ -1.57
MSC3	YLR219W	YGR035W-A	Q45U48	73 aa		5.24	□□□□□ -1.57
MSC3	YLR219W	COQ3	P27680	312 aa		5.23	□□□□□ -1.57
MSC3	YLR219W	TIR2	P33890	251 aa		5.23	□□□□□ -1.57
MSC3	YLR219W	YER085C	P40058	173 aa		5.23	□□□□□ -1.57
MSC3	YLR219W	HUA1	P40325	198 aa		5.23	□□□□□ -1.57
MSC3	YLR219W	POG1	P40473	351 aa		5.23	□□□□□ -1.57
MSC3	YLR219W	YPI1	P43587	155 aa		5.23	□□□□□ -1.57
MSC3	YLR219W	DDI2	P0CH63	225 aa		5.23	□□□□□ -1.57
MSC3	YLR219W	DDI3	P0CH64	225 aa		5.23	□□□□□ -1.57
MSC3	YLR219W	YIL163C	P40448	117 aa		5.23	□□□□□ -1.57
MSC3	YLR219W	AIM24	P47127	394 aa		5.23	□□□□□ -1.57
MSC3	YLR219W	CAX4	P53223	239 aa		5.23	□□□□□ -1.57
MSC3	YLR219W	YHR212W-A	P0CX91	67 aa		5.22	□□□□□ -1.57
MSC3	YLR219W	PHD1	P36093	366 aa		5.22	□□□□□ -1.57
MSC3	YLR219W	YGR025W	P53216	100 aa		5.22	□□□□□ -1.57
MSC3	YLR219W	TOM7	P53507	60 aa		5.22	□□□□□ -1.57
MSC3	YLR219W	MRX11	Q03079	207 aa		5.22	□□□□□ -1.57
MSC3	YLR219W	ATG39	Q06159	398 aa		5.22	□□□□□ -1.57
MSC3	YLR219W	YPR145C-A	Q2V2P0	78 aa		5.22	□□□□□ -1.57
MSC3	YLR219W	RPS22A	P0C0W1	130 aa	Known RBP	5.22	□□□□□ -1.57
MSC3	YLR219W	NTF2	P33331	125 aa	Known RBP	5.22	□□□□□ -1.57
MSC3	YLR219W	ICS2	P38284	255 aa		5.22	□□□□□ -1.57
MSC3	YLR219W	YHR173C	P38864	112 aa		5.22	□□□□□ -1.57
MSC3	YLR219W	LCB3	P47013	409 aa		5.22	□□□□□ -1.57
MSC3	YLR219W	RAV2	Q03956	351 aa		5.22	□□□□□ -1.57
MSC3	YLR219W	SEC59	P20048	519 aa		5.21	□□□□□ -1.58
MSC3	YLR219W	LAC1	P28496	418 aa		5.21	□□□□□ -1.58
MSC3	YLR219W	HIT1	P46973	164 aa		5.21	□□□□□ -1.58
MSC3	YLR219W	DYN1	P36022	4092 aa		5.21	□□□□□ -1.58
MSC3	YLR219W	SNF11	P38956	169 aa		5.21	□□□□□ -1.58
MSC3	YLR219W	DIA1	P54005	336 aa		5.21	□□□□□ -1.58
MSC3	YLR219W	UBC7	Q02159	165 aa		5.21	□□□□□ -1.58
MSC3	YLR219W	YOL160W	Q08321	113 aa		5.21	□□□□□ -1.58
MSC3	YLR219W	MRS1	P07266	363 aa		5.2	□□□□□ -1.58
MSC3	YLR219W	MBB1	P39534	108 aa		5.2	□□□□□ -1.58
MSC3	YLR219W	MST28	P39552	234 aa		5.2	□□□□□ -1.58
MSC3	YLR219W	CYB5	P40312	120 aa		5.2	□□□□□ -1.58
MSC3	YLR219W	MST27	P53176	234 aa		5.2	□□□□□ -1.58
MSC3	YLR219W	ATX2	Q12067	313 aa		5.2	□□□□□ -1.58
MSC3	YLR219W	ATP16	Q12165	160 aa		5.2	□□□□□ -1.58
MSC3	YLR219W	YBR090C	P38253	122 aa		5.19	□□□□□ -1.58
MSC3	YLR219W	MRPL49	P40858	161 aa	Predicted RBP	5.19	□□□□□ -1.58
MSC3	YLR219W	IZH1	Q03419	316 aa		5.19	□□□□□ -1.58
MSC3	YLR219W	TAR1	Q8TGM6	124 aa		5.19	□□□□□ -1.58
MSC3	YLR219W	YLR302C	O13544	120 aa		5.19	□□□□□ -1.58
MSC3	YLR219W	ADH3	P07246	375 aa	Known RBP	5.19	□□□□□ -1.58
MSC3	YLR219W	COX2	P00410	251 aa		5.18	□□□□□ -1.58
MSC3	YLR219W	CMC1	P36064	111 aa		5.18	□□□□□ -1.58
MSC3	YLR219W	MRPS9	P38120	278 aa		5.18	□□□□□ -1.58
MSC3	YLR219W	ATG8	P38182	117 aa	RIP-Chip data	5.18	□□□□□ -1.58	not detected
MSC3	YLR219W	GPI2	P46961	280 aa		5.18	□□□□□ -1.58
MSC3	YLR219W	DAD3	P69850	94 aa		5.18	□□□□□ -1.58
MSC3	YLR219W	STP4	Q07351	490 aa		5.18	□□□□□ -1.58
MSC3	YLR219W	RPB3	P16370	318 aa	Known RBP	5.18	□□□□□ -1.58
MSC3	YLR219W	SRP21	P32342	167 aa		5.18	□□□□□ -1.58
MSC3	YLR219W	UTR5	P32630	166 aa		5.18	□□□□□ -1.58
MSC3	YLR219W	MRPL4	P36517	319 aa		5.18	□□□□□ -1.58
MSC3	YLR219W	VMA21	P41806	77 aa		5.18	□□□□□ -1.58
MSC3	YLR219W	NAT3	Q06504	195 aa		5.18	□□□□□ -1.58
MSC3	YLR219W	HTB2	P02294	131 aa		5.17	□□□□□ -1.58
MSC3	YLR219W	SIM1	P40472	476 aa		5.17	□□□□□ -1.58
MSC3	YLR219W	YLR118C	Q12354	227 aa		5.17	□□□□□ -1.58
MSC3	YLR219W	FMP49	A0A023PZB3	126 aa		5.16	□□□□□ -1.58
MSC3	YLR219W	YBR144C	P34215	104 aa		5.16	□□□□□ -1.58

Retrieved 100 of 5,963 RNA–protein pairs in 48.6 ms