RNA–Protein interactions for RNA: YLR175W

CBF5, Transcript of Pseudouridine synthase catalytic subunit of box H/ACA snoRNPs, yeastyeast

Gene CBF5, Length 1,452 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CBF5YLR175W SDH8P38345 138 aa3.59□□□□□ -1.84
CBF5YLR175W CYB5P40312 120 aa3.59□□□□□ -1.84
CBF5YLR175W POR2P40478 281 aa3.59□□□□□ -1.84
CBF5YLR175W DSK2P48510 373 aa3.59□□□□□ -1.84
CBF5YLR175W TIM21P53220 239 aa3.59□□□□□ -1.84
CBF5YLR175W CPD1P53314 239 aa3.59□□□□□ -1.84
CBF5YLR175W CAB4P53332 305 aa3.59□□□□□ -1.84
CBF5YLR175W HHO1P53551 258 aa3.59□□□□□ -1.84
CBF5YLR175W MRX11Q03079 207 aa3.59□□□□□ -1.84
CBF5YLR175W AYT1Q12226 474 aa3.59□□□□□ -1.84
CBF5YLR175W COX2P00410 251 aa3.58□□□□□ -1.84
CBF5YLR175W ADH3P07246 375 aaKnown RBP3.58□□□□□ -1.84
CBF5YLR175W DDI2P0CH63 225 aa3.58□□□□□ -1.84
CBF5YLR175W DDI3P0CH64 225 aa3.58□□□□□ -1.84
CBF5YLR175W LAC1P28496 418 aa3.58□□□□□ -1.84
CBF5YLR175W HMX1P32339 317 aa3.58□□□□□ -1.84
CBF5YLR175W RPS0AP32905 252 aaKnown RBP3.58□□□□□ -1.84
CBF5YLR175W YNK1P36010 153 aaKnown RBP3.58□□□□□ -1.84
CBF5YLR175W MRPL4P36517 319 aa3.58□□□□□ -1.84
CBF5YLR175W TRS20P38334 175 aa3.58□□□□□ -1.84
CBF5YLR175W GLE2P40066 365 aa3.58□□□□□ -1.84
CBF5YLR175W BNS1P50084 137 aa3.58□□□□□ -1.84
CBF5YLR175W SNO1Q03144 224 aa3.58□□□□□ -1.84
CBF5YLR175W YML108WQ03759 105 aa3.58□□□□□ -1.84
CBF5YLR175W LOA1Q06508 300 aa3.58□□□□□ -1.84
CBF5YLR175W ATX2Q12067 313 aa3.58□□□□□ -1.84
CBF5YLR175W MRPL23Q12487 163 aaPredicted RBP3.58□□□□□ -1.84
CBF5YLR175W RPS2P25443 254 aaKnown RBP3.57□□□□□ -1.84
CBF5YLR175W MRPS9P38120 278 aa3.57□□□□□ -1.84
CBF5YLR175W YPT10P38146 199 aa3.57□□□□□ -1.84
CBF5YLR175W LSM2P38203 95 aaKnown RBP3.57□□□□□ -1.84
CBF5YLR175W IMD2P38697 523 aaKnown RBP3.57□□□□□ -1.84
CBF5YLR175W YHR173CP38864 112 aa3.57□□□□□ -1.84
CBF5YLR175W GPI2P46961 280 aa3.57□□□□□ -1.84
CBF5YLR175W TOS8P53147 276 aa3.57□□□□□ -1.84
CBF5YLR175W DUG3P53871 357 aa3.57□□□□□ -1.84
CBF5YLR175W LDS2Q08218 356 aa3.57□□□□□ -1.84
CBF5YLR175W MSA1Q08471 629 aa3.57□□□□□ -1.84
CBF5YLR175W FIT2Q08906 153 aa3.57□□□□□ -1.84
CBF5YLR175W PRM3Q08931 133 aa3.57□□□□□ -1.84
CBF5YLR175W YLR118CQ12354 227 aa3.57□□□□□ -1.84
CBF5YLR175W MRS1P07266 363 aa3.56□□□□□ -1.84
CBF5YLR175W YER190C-BP0CX94 160 aa3.56□□□□□ -1.84
CBF5YLR175W YEL077W-AP0CX95 160 aa3.56□□□□□ -1.84
CBF5YLR175W YGR296C-BP0CX96 160 aa3.56□□□□□ -1.84
CBF5YLR175W YPL283W-BP0CX97 160 aa3.56□□□□□ -1.84
CBF5YLR175W YPR204C-AP0CX98 160 aa3.56□□□□□ -1.84
CBF5YLR175W YFL068WP0CX99 160 aa3.56□□□□□ -1.84
CBF5YLR175W YLL066W-AP0CY00 160 aa3.56□□□□□ -1.84
CBF5YLR175W YLL067W-AP0CY01 160 aa3.56□□□□□ -1.84
CBF5YLR175W COQ3P27680 312 aa3.56□□□□□ -1.84
CBF5YLR175W ATG8P38182 117 aaRIP-Chip data3.56□□□□□ -1.84not detected
CBF5YLR175W HSP10P38910 106 aa3.56□□□□□ -1.84
CBF5YLR175W PGD1P40356 397 aa3.56□□□□□ -1.84
CBF5YLR175W YPI1P43587 155 aa3.56□□□□□ -1.84
CBF5YLR175W FIP1P45976 327 aa3.56□□□□□ -1.84
CBF5YLR175W AIM24P47127 394 aa3.56□□□□□ -1.84
CBF5YLR175W SRP21P32342 167 aa3.55□□□□□ -1.84
CBF5YLR175W NTF2P33331 125 aaKnown RBP3.55□□□□□ -1.84
CBF5YLR175W YKL102CP34249 101 aa3.55□□□□□ -1.84
CBF5YLR175W SNF11P38956 169 aa3.55□□□□□ -1.84
CBF5YLR175W PAU15P40585 124 aa3.55□□□□□ -1.84
CBF5YLR175W DUO1P53168 247 aaKnown RBP3.55□□□□□ -1.84
CBF5YLR175W UBC7Q02159 165 aa3.55□□□□□ -1.84
CBF5YLR175W YPR145C-AQ2V2P0 78 aa3.55□□□□□ -1.84
CBF5YLR175W YER175W-AQ8TGU4 54 aa3.55□□□□□ -1.84
CBF5YLR175W YBR126W-AQ8TGU7 68 aa3.55□□□□□ -1.84
CBF5YLR175W FMP49A0A023PZB3 126 aa3.54□□□□□ -1.84
CBF5YLR175W RPB3P16370 318 aaKnown RBP3.54□□□□□ -1.84
CBF5YLR175W CDC43P18898 376 aa3.54□□□□□ -1.84
CBF5YLR175W MRPL20P22354 195 aaPredicted RBP3.54□□□□□ -1.84
CBF5YLR175W TIR2P33890 251 aa3.54□□□□□ -1.84
CBF5YLR175W VMA21P41806 77 aa3.54□□□□□ -1.84
CBF5YLR175W DAN1P47178 298 aa3.54□□□□□ -1.84
CBF5YLR175W MGA1P53050 456 aa3.54□□□□□ -1.84
CBF5YLR175W ATP19P81451 68 aa3.54□□□□□ -1.84
CBF5YLR175W ZEO1Q08245 113 aa3.54□□□□□ -1.84
CBF5YLR175W YOP1Q12402 180 aa3.54□□□□□ -1.84
CBF5YLR175W ERG27Q12452 347 aaKnown RBP3.54□□□□□ -1.84
CBF5YLR175W HTB2P02294 131 aa3.54□□□□□ -1.84
CBF5YLR175W TIR1P10863 254 aa3.54□□□□□ -1.84
CBF5YLR175W NHP6AP11632 93 aaKnown RBP3.54□□□□□ -1.84
CBF5YLR175W UTR5P32630 166 aa3.54□□□□□ -1.84
CBF5YLR175W SDH4P37298 181 aa3.54□□□□□ -1.84
CBF5YLR175W AME1P38313 324 aa3.54□□□□□ -1.84
CBF5YLR175W SNU13P39990 126 aaKnown RBP3.54□□□□□ -1.84
CBF5YLR175W RPA43P46669 326 aa3.54□□□□□ -1.84
CBF5YLR175W HAM1P47119 197 aaKnown RBP3.54□□□□□ -1.84
CBF5YLR175W YDL186WP48568 277 aa3.54□□□□□ -1.84
CBF5YLR175W YGL185CP53100 379 aa3.54□□□□□ -1.84
CBF5YLR175W DAD3P69850 94 aa3.54□□□□□ -1.84
CBF5YLR175W YMR181CQ03231 154 aa3.54□□□□□ -1.84
CBF5YLR175W IZH1Q03419 316 aa3.54□□□□□ -1.84
CBF5YLR175W RAV2Q03956 351 aa3.54□□□□□ -1.84
CBF5YLR175W ATG39Q06159 398 aa3.54□□□□□ -1.84
CBF5YLR175W SNU23Q12368 194 aaPredicted RBP3.54□□□□□ -1.84
CBF5YLR175W YGR035W-AQ45U48 73 aa3.54□□□□□ -1.84
CBF5YLR175W YHR212W-AP0CX91 67 aa3.53□□□□□ -1.84
CBF5YLR175W PHD1P36093 366 aa3.53□□□□□ -1.84
CBF5YLR175W SRP14P38985 146 aa3.53□□□□□ -1.84
Retrieved 100 of 5,963 RNA–protein pairs in 48.6 ms