RNA–Protein interactions for RNA: YLR135W

SLX4, Transcript of Endonuclease involved in processing DNA, yeastyeast

Gene SLX4, Length 2,247 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SLX4YLR135W SPT14P32363 452 aa0.7□□□□□ -2.3
SLX4YLR135W SHB17P36136 271 aaKnown RBP0.7□□□□□ -2.3
SLX4YLR135W APS3P47064 194 aa0.7□□□□□ -2.3
SLX4YLR135W YMR320WQ04897 101 aa0.7□□□□□ -2.3
SLX4YLR135W RFU1Q08003 200 aa0.7□□□□□ -2.3
SLX4YLR135W KIN28P06242 306 aa0.69□□□□□ -2.3
SLX4YLR135W HSP12P22943 109 aaKnown RBP0.69□□□□□ -2.3
SLX4YLR135W YKR070WP36151 352 aaKnown RBP0.69□□□□□ -2.3
SLX4YLR135W VMA10P48836 114 aaKnown RBP0.69□□□□□ -2.3
SLX4YLR135W GEP7P53171 287 aa0.69□□□□□ -2.3
SLX4YLR135W RCF2P53721 224 aa0.69□□□□□ -2.3
SLX4YLR135W YDR366CP87287 132 aa0.69□□□□□ -2.3
SLX4YLR135W EST3Q03096 181 aa0.69□□□□□ -2.3
SLX4YLR135W AVO2Q04749 426 aa0.69□□□□□ -2.3
SLX4YLR135W TAF2P23255 1407 aa0.69□□□□□ -2.3
SLX4YLR135W SLH1P53327 1967 aaKnown RBP0.69□□□□□ -2.3
SLX4YLR135W PRE1P22141 198 aaKnown RBP0.69□□□□□ -2.3
SLX4YLR135W ECM31P38122 312 aa0.69□□□□□ -2.3
SLX4YLR135W YGR201CP42936 225 aa0.69□□□□□ -2.3
SLX4YLR135W YMR007WQ03675 126 aa0.69□□□□□ -2.3
SLX4YLR135W FMN1Q03778 218 aa0.69□□□□□ -2.3
SLX4YLR135W FIT1Q04433 528 aa0.69□□□□□ -2.3
SLX4YLR135W KEI1Q06346 221 aa0.69□□□□□ -2.3
SLX4YLR135W IRC19Q07843 230 aa0.69□□□□□ -2.3
SLX4YLR135W GPI2P46961 280 aa0.68□□□□□ -2.3
SLX4YLR135W COF1Q03048 143 aaKnown RBP0.68□□□□□ -2.3
SLX4YLR135W CSN9Q03981 162 aa0.68□□□□□ -2.3
SLX4YLR135W YGL041W-AP0C5N3 154 aa0.68□□□□□ -2.3
SLX4YLR135W ATG8P38182 117 aaRIP-Chip data0.68□□□□□ -2.3not detected
SLX4YLR135W YHL037CP38733 133 aa0.68□□□□□ -2.3
SLX4YLR135W YAP3P38749 330 aa0.68□□□□□ -2.3
SLX4YLR135W YEL014CP39999 101 aa0.68□□□□□ -2.3
SLX4YLR135W DCV1P43595 202 aa0.68□□□□□ -2.3
SLX4YLR135W YGR039WP53225 103 aa0.68□□□□□ -2.3
SLX4YLR135W YCL001W-AP87012 153 aa0.68□□□□□ -2.3
SLX4YLR135W CMC4Q3E7A9 73 aa0.68□□□□□ -2.3
SLX4YLR135W HFA1P32874 2273 aa0.67□□□□□ -2.3
SLX4YLR135W SUI1P32911 108 aaKnown RBP0.67□□□□□ -2.3
SLX4YLR135W LCL2Q08045 131 aa0.67□□□□□ -2.3
SLX4YLR135W RIB3Q99258 208 aa0.67□□□□□ -2.3
SLX4YLR135W COX5BP00425 151 aa0.66□□□□□ -2.3
SLX4YLR135W ACP1P32463 125 aa0.66□□□□□ -2.3
SLX4YLR135W HHO1P53551 258 aa0.66□□□□□ -2.3
SLX4YLR135W HYP2P23301 157 aaKnown RBP0.66□□□□□ -2.3
SLX4YLR135W FYV5P25585 152 aa0.66□□□□□ -2.3
SLX4YLR135W IPT1P38954 527 aa0.66□□□□□ -2.3
SLX4YLR135W YFL051CP43552 160 aa0.66□□□□□ -2.3
SLX4YLR135W LSM8P47093 109 aaKnown RBP0.66□□□□□ -2.3
SLX4YLR135W YPR153WQ06537 140 aa0.66□□□□□ -2.3
SLX4YLR135W GPI11Q06636 219 aa0.66□□□□□ -2.3
SLX4YLR135W CCW12Q12127 133 aa0.66□□□□□ -2.3
SLX4YLR135W ATP14Q12349 124 aa0.66□□□□□ -2.3
SLX4YLR135W MHF1Q3E835 90 aa0.66□□□□□ -2.3
SLX4YLR135W NHP6AP11632 93 aaKnown RBP0.65□□□□□ -2.3
SLX4YLR135W RPS1BP23248 255 aaKnown RBP0.65□□□□□ -2.3
SLX4YLR135W RPL14AP36105 138 aaKnown RBP0.65□□□□□ -2.3
SLX4YLR135W YBR027CP38220 110 aa0.65□□□□□ -2.3
SLX4YLR135W RPL14BP38754 138 aaKnown RBP0.65□□□□□ -2.3
SLX4YLR135W GIM4P40005 111 aaKnown RBP0.65□□□□□ -2.3
SLX4YLR135W PHB1P40961 287 aa0.65□□□□□ -2.3
SLX4YLR135W DIE2P50076 525 aa0.65□□□□□ -2.3
SLX4YLR135W YNL019CP53975 284 aa0.65□□□□□ -2.3
SLX4YLR135W SEN15Q04675 128 aa0.65□□□□□ -2.3
SLX4YLR135W VAM10Q08474 114 aa0.65□□□□□ -2.3
SLX4YLR135W SPC3Q12133 184 aa0.65□□□□□ -2.3
SLX4YLR135W FCY1Q12178 158 aa0.65□□□□□ -2.3
SLX4YLR135W HSP150P32478 413 aa0.65□□□□□ -2.31
SLX4YLR135W YGR017WP53210 297 aa0.65□□□□□ -2.31
SLX4YLR135W HYM1P32464 399 aa0.64□□□□□ -2.31
SLX4YLR135W RPS1AP33442 255 aaKnown RBP0.64□□□□□ -2.31
SLX4YLR135W CYC2P38909 366 aa0.64□□□□□ -2.31
SLX4YLR135W YAR064WP39563 99 aa0.64□□□□□ -2.31
SLX4YLR135W SPG1P50088 95 aa0.64□□□□□ -2.31
SLX4YLR135W YGR042WP53227 271 aa0.64□□□□□ -2.31
SLX4YLR135W ELC1Q03071 99 aa0.64□□□□□ -2.31
SLX4YLR135W TMA23Q03525 211 aa0.64□□□□□ -2.31
SLX4YLR135W SOM1Q05676 74 aa0.64□□□□□ -2.31
SLX4YLR135W HUT1Q12520 339 aa0.64□□□□□ -2.31
SLX4YLR135W RPL33AP05744 107 aaKnown RBP0.64□□□□□ -2.31
SLX4YLR135W UGX2P32772 223 aa0.64□□□□□ -2.31
SLX4YLR135W YHR140WP38842 239 aa0.64□□□□□ -2.31
SLX4YLR135W HUA1P40325 198 aa0.64□□□□□ -2.31
SLX4YLR135W HPM1P40481 377 aa0.64□□□□□ -2.31
SLX4YLR135W YIL102CP40488 101 aa0.64□□□□□ -2.31
SLX4YLR135W EMC4P53073 190 aa0.64□□□□□ -2.31
SLX4YLR135W YGL149WP53116 101 aa0.64□□□□□ -2.31
SLX4YLR135W SUA7P29055 345 aaPredicted RBP0.63□□□□□ -2.31
SLX4YLR135W POP7P38291 140 aa0.63□□□□□ -2.31
SLX4YLR135W YGL204CP53089 101 aa0.63□□□□□ -2.31
SLX4YLR135W SPC2Q04969 178 aa0.63□□□□□ -2.31
SLX4YLR135W RAF1Q06891 181 aa0.63□□□□□ -2.31
SLX4YLR135W NAT5Q08689 176 aa0.63□□□□□ -2.31
SLX4YLR135W YOR385WQ08909 290 aa0.63□□□□□ -2.31
SLX4YLR135W KTI11Q3E840 82 aa0.63□□□□□ -2.31
SLX4YLR135W FMP49A0A023PZB3 126 aa0.62□□□□□ -2.31
SLX4YLR135W YOL013W-AP0C272 63 aaPredicted RBP0.62□□□□□ -2.31
SLX4YLR135W YGL014C-AP0C5N1 53 aa0.62□□□□□ -2.31
SLX4YLR135W YCR050CP25630 102 aa0.62□□□□□ -2.31
SLX4YLR135W TRS20P38334 175 aa0.62□□□□□ -2.31
SLX4YLR135W YAL064WP39711 94 aa0.62□□□□□ -2.31
Retrieved 100 of 5,963 RNA–protein pairs in 33.7 ms