RNA–Protein interactions for RNA: YLR040C

AFB1, Transcript of MATalpha-specific a-factor blocker, yeastyeast

Gene AFB1, Length 675 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
AFB1YLR040C FMN1Q03778 218 aa0.15□□□□□ -2.39
AFB1YLR040C IRC19Q07843 230 aa0.15□□□□□ -2.39
AFB1YLR040C RPL35AP0CX84 120 aaKnown RBP0.14□□□□□ -2.39
AFB1YLR040C RPL35BP0CX85 120 aaKnown RBP0.14□□□□□ -2.39
AFB1YLR040C RCF2P53721 224 aa0.14□□□□□ -2.39
AFB1YLR040C DIE2P50076 525 aa0.13□□□□□ -2.39
AFB1YLR040C TMA20P89886 181 aaPredicted RBP0.13□□□□□ -2.39
AFB1YLR040C SPA2P23201 1466 aaKnown RBP0.13□□□□□ -2.39
AFB1YLR040C HSL1P34244 1518 aa0.13□□□□□ -2.39
AFB1YLR040C RPL33AP05744 107 aaKnown RBP0.12□□□□□ -2.39
AFB1YLR040C UBI4P0CG63 381 aaKnown RBP0.12□□□□□ -2.39
AFB1YLR040C SRP21P32342 167 aa0.12□□□□□ -2.39
AFB1YLR040C YGL041W-AP0C5N3 154 aa0.11□□□□□ -2.39
AFB1YLR040C YHR140WP38842 239 aa0.11□□□□□ -2.39
AFB1YLR040C YGL193CP53097 103 aa0.11□□□□□ -2.39
AFB1YLR040C GPI11Q06636 219 aa0.11□□□□□ -2.39
AFB1YLR040C RFU1Q08003 200 aa0.11□□□□□ -2.39
AFB1YLR040C FES1P38260 290 aa0.1□□□□□ -2.39
AFB1YLR040C YER121WP40076 114 aa0.1□□□□□ -2.39
AFB1YLR040C FIP1P45976 327 aa0.1□□□□□ -2.39
AFB1YLR040C LSM3P57743 89 aaKnown RBP0.1□□□□□ -2.39
AFB1YLR040C RDI1Q12434 202 aa0.1□□□□□ -2.39
AFB1YLR040C ATG38Q05789 226 aaKnown RBP0.09□□□□□ -2.4
AFB1YLR040C YGL014C-AP0C5N1 53 aa0.08□□□□□ -2.4
AFB1YLR040C RPL30P14120 105 aaKnown RBP0.08□□□□□ -2.4
AFB1YLR040C YPR153WQ06537 140 aa0.08□□□□□ -2.4
AFB1YLR040C YPR202WQ08993 238 aa0.08□□□□□ -2.4
AFB1YLR040C URA2P07259 2214 aaKnown RBP0.07□□□□□ -2.4
AFB1YLR040C SNF2P22082 1703 aa0.07□□□□□ -2.4
AFB1YLR040C RME1P32338 300 aaKnown RBP0.06□□□□□ -2.4
AFB1YLR040C DLS1P40366 167 aa0.06□□□□□ -2.4
AFB1YLR040C GIM5Q04493 163 aa0.06□□□□□ -2.4
AFB1YLR040C YOR034C-AQ3E735 80 aa0.06□□□□□ -2.4
AFB1YLR040C BNI1P41832 1953 aa0.06□□□□□ -2.4
AFB1YLR040C NHP6AP11632 93 aaKnown RBP0.05□□□□□ -2.4
AFB1YLR040C PEX34P25584 144 aa0.05□□□□□ -2.4
AFB1YLR040C YJL218WP40892 196 aaKnown RBP0.05□□□□□ -2.4
AFB1YLR040C MVB12P42939 101 aa0.05□□□□□ -2.4
AFB1YLR040C GPI2P46961 280 aa0.05□□□□□ -2.4
AFB1YLR040C YJL009WP47078 108 aa0.05□□□□□ -2.4
AFB1YLR040C EST3Q03096 181 aa0.05□□□□□ -2.4
AFB1YLR040C YMR122CQ03879 124 aa0.05□□□□□ -2.4
AFB1YLR040C IRC21Q04772 201 aa0.05□□□□□ -2.4
AFB1YLR040C YLR053CQ12026 108 aa0.04□□□□□ -2.4
AFB1YLR040C MRPL24P36525 258 aaPredicted RBP0.03□□□□□ -2.4
AFB1YLR040C SLM6P38343 150 aa0.03□□□□□ -2.4
AFB1YLR040C YER181CP40097 107 aa0.03□□□□□ -2.4
AFB1YLR040C APQ12P40532 138 aa0.03□□□□□ -2.4
AFB1YLR040C MHF1Q3E835 90 aa0.03□□□□□ -2.4
AFB1YLR040C HUG1Q6Q5K6 68 aa0.03□□□□□ -2.4
AFB1YLR040C CHD1P32657 1468 aa0.03□□□□□ -2.41
AFB1YLR040C DDR48P18899 430 aaKnown RBP0.02□□□□□ -2.41
AFB1YLR040C PHO13P19881 312 aa0.02□□□□□ -2.41
AFB1YLR040C YDR476CQ03362 224 aa0.02□□□□□ -2.41
AFB1YLR040C SCS22Q6Q595 175 aa0.02□□□□□ -2.41
AFB1YLR040C BLM10P43583 2143 aa0.01□□□□□ -2.41
AFB1YLR040C COX5BP00425 151 aa0.01□□□□□ -2.41
AFB1YLR040C SRL3P36167 246 aa0.01□□□□□ -2.41
AFB1YLR040C LST8P41318 303 aa0.01□□□□□ -2.41
AFB1YLR040C ATP19P81451 68 aa0.01□□□□□ -2.41
AFB1YLR040C MAK3Q03503 176 aa0.01□□□□□ -2.41
AFB1YLR040C RRT7Q07829 113 aa0.01□□□□□ -2.41
AFB1YLR040C YCL001W-AP87012 153 aa0□□□□□ -2.41
AFB1YLR040C FIT3Q08907 204 aa0□□□□□ -2.41
AFB1YLR040C TY1B-HO13535 1793 aa-0.01□□□□□ -2.41
AFB1YLR040C VPS51P36116 164 aa-0.01□□□□□ -2.41
AFB1YLR040C TRS20P38334 175 aa-0.01□□□□□ -2.41
AFB1YLR040C VMA10P48836 114 aaKnown RBP-0.01□□□□□ -2.41
AFB1YLR040C YNL019CP53975 284 aa-0.01□□□□□ -2.41
AFB1YLR040C YMR321CQ04898 105 aa-0.01□□□□□ -2.41
AFB1YLR040C COA4Q05809 96 aa-0.01□□□□□ -2.41
AFB1YLR040C COA6Q3E846 104 aa-0.01□□□□□ -2.41
AFB1YLR040C BRR2P32639 2163 aaKnown RBP-0.02□□□□□ -2.41
AFB1YLR040C AIM4P38305 123 aaPredicted RBP-0.02□□□□□ -2.41
AFB1YLR040C YPD1Q07688 167 aa-0.02□□□□□ -2.41
AFB1YLR040C TY4B-JP47024 1803 aa-0.03□□□□□ -2.42
AFB1YLR040C RPS28BP0C0X0 67 aaKnown RBP-0.04□□□□□ -2.42
AFB1YLR040C NMT1P14743 455 aa-0.04□□□□□ -2.42
AFB1YLR040C FYV5P25585 152 aa-0.04□□□□□ -2.42
AFB1YLR040C HUT1Q12520 339 aa-0.04□□□□□ -2.42
AFB1YLR040C RPS28AQ3E7X9 67 aaPredicted RBP-0.04□□□□□ -2.42
AFB1YLR040C FAS2P19097 1887 aaKnown RBP-0.04□□□□□ -2.42
AFB1YLR040C SEC16P48415 2195 aaKnown RBP-0.05□□□□□ -2.42
AFB1YLR040C YRF1-3P0CX14 1859 aa-0.05□□□□□ -2.42
AFB1YLR040C YRF1-7P0CX15 1859 aa-0.05□□□□□ -2.42
AFB1YLR040C RPL40AP0CH08 128 aaKnown RBP-0.05□□□□□ -2.42
AFB1YLR040C RPL40BP0CH09 128 aaKnown RBP-0.05□□□□□ -2.42
AFB1YLR040C PBI2P0CT04 75 aaKnown RBP-0.05□□□□□ -2.42
AFB1YLR040C MYO1P08964 1928 aa-0.05□□□□□ -2.42
AFB1YLR040C SEC7P11075 2009 aaKnown RBP-0.06□□□□□ -2.42
AFB1YLR040C URB1P34241 1764 aaKnown RBP-0.06□□□□□ -2.42
AFB1YLR040C RTC6O14464 93 aa-0.06□□□□□ -2.42
AFB1YLR040C QCR2P07257 368 aa-0.06□□□□□ -2.42
AFB1YLR040C YHR213WP0CI67 198 aa-0.06□□□□□ -2.42
AFB1YLR040C YBR013CP38215 129 aa-0.06□□□□□ -2.42
AFB1YLR040C SMD2Q06217 110 aaKnown RBP-0.06□□□□□ -2.42
AFB1YLR040C NSL1Q12143 216 aa-0.06□□□□□ -2.42
AFB1YLR040C EFG1Q3E705 233 aaKnown RBP-0.06□□□□□ -2.42
AFB1YLR040C HSP12P22943 109 aaKnown RBP-0.07□□□□□ -2.42
AFB1YLR040C RPS1BP23248 255 aaKnown RBP-0.07□□□□□ -2.42
Retrieved 100 of 5,963 RNA–protein pairs in 105 ms