RNA–Protein interactions for RNA: YLL040C

VPS13, Transcript of Protein involved in prospore membrane morphogenesis, yeastyeast

Gene VPS13, Length 9,435 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS13YLL040C YAP6Q03935 383 aa1.95□□□□□ -2.1
VPS13YLL040C POM34Q12445 299 aa1.95□□□□□ -2.1
VPS13YLL040C YJR112W-AQ3E743 109 aa1.95□□□□□ -2.1
VPS13YLL040C RPS23AP0CX29 145 aaKnown RBP1.94□□□□□ -2.1
VPS13YLL040C RPS23BP0CX30 145 aa1.94□□□□□ -2.1
VPS13YLL040C REC104P33323 182 aa1.94□□□□□ -2.1
VPS13YLL040C RTS2P40962 232 aa1.94□□□□□ -2.1
VPS13YLL040C YIL134C-AQ45U18 67 aa1.94□□□□□ -2.1
VPS13YLL040C VAR1P02381 398 aa1.94□□□□□ -2.1
VPS13YLL040C PIS1P06197 220 aaKnown RBP1.94□□□□□ -2.1
VPS13YLL040C YBL071CP38185 102 aa1.94□□□□□ -2.1
VPS13YLL040C GPI18P38211 433 aa1.94□□□□□ -2.1
VPS13YLL040C DOG2P38773 246 aa1.94□□□□□ -2.1
VPS13YLL040C TIF34P40217 347 aaKnown RBP1.94□□□□□ -2.1
VPS13YLL040C AIR1P40507 360 aaKnown RBP1.94□□□□□ -2.1
VPS13YLL040C INP1Q03694 420 aa1.94□□□□□ -2.1
VPS13YLL040C TIM18Q08749 192 aa1.94□□□□□ -2.1
VPS13YLL040C MRPL31P14063 131 aaPredicted RBP1.94□□□□□ -2.1
VPS13YLL040C ERG4P25340 473 aa1.94□□□□□ -2.1
VPS13YLL040C UTH1P36135 365 aa1.94□□□□□ -2.1
VPS13YLL040C PRY1P47032 299 aa1.94□□□□□ -2.1
VPS13YLL040C YJR115WP47152 169 aa1.94□□□□□ -2.1
VPS13YLL040C GPI19Q04082 140 aa1.94□□□□□ -2.1
VPS13YLL040C DPP1Q05521 289 aa1.94□□□□□ -2.1
VPS13YLL040C COX10P21592 462 aa1.94□□□□□ -2.1
VPS13YLL040C MCH2P36032 473 aa1.94□□□□□ -2.1
VPS13YLL040C ADH6Q04894 360 aaKnown RBP1.94□□□□□ -2.1
VPS13YLL040C MRPL23Q12487 163 aaPredicted RBP1.94□□□□□ -2.1
VPS13YLL040C YER076CP40049 302 aa1.94□□□□□ -2.1
VPS13YLL040C REE1P40893 198 aa1.94□□□□□ -2.1
VPS13YLL040C YIR021W-AQ3E739 70 aa1.94□□□□□ -2.1
VPS13YLL040C SFT2P38166 215 aa1.94□□□□□ -2.1
VPS13YLL040C YER084WP40057 128 aa1.94□□□□□ -2.1
VPS13YLL040C ABM1P47146 123 aa1.94□□□□□ -2.1
VPS13YLL040C THG1P53215 237 aaKnown RBP1.94□□□□□ -2.1
VPS13YLL040C LDS2Q08218 356 aa1.94□□□□□ -2.1
VPS13YLL040C CCW12Q12127 133 aa1.94□□□□□ -2.1
VPS13YLL040C YCR022CP25620 114 aa1.94□□□□□ -2.1
VPS13YLL040C ZRT1P32804 376 aa1.94□□□□□ -2.1
VPS13YLL040C CIS3P47001 227 aa1.94□□□□□ -2.1
VPS13YLL040C SDC1Q03323 175 aa1.94□□□□□ -2.1
VPS13YLL040C YLR112WQ12130 139 aa1.94□□□□□ -2.1
VPS13YLL040C RPL42AP0CX27 106 aaKnown RBP1.93□□□□□ -2.1
VPS13YLL040C RPL42BP0CX28 106 aaKnown RBP1.93□□□□□ -2.1
VPS13YLL040C YDR209CQ03480 137 aa1.93□□□□□ -2.1
VPS13YLL040C DFG5Q05031 458 aa1.93□□□□□ -2.1
VPS13YLL040C YOR376WQ08900 122 aa1.93□□□□□ -2.1
VPS13YLL040C DFM1Q12743 341 aaKnown RBP1.93□□□□□ -2.1
VPS13YLL040C ARO2P28777 376 aaKnown RBP1.93□□□□□ -2.1
VPS13YLL040C RPA12P32529 125 aaKnown RBP1.93□□□□□ -2.1
VPS13YLL040C RPS2P25443 254 aaKnown RBP1.93□□□□□ -2.1
VPS13YLL040C Q0144Q9ZZW2 109 aa1.93□□□□□ -2.1
VPS13YLL040C MRPL11P36521 249 aaPredicted RBP1.93□□□□□ -2.1
VPS13YLL040C ECO1P43605 281 aa1.93□□□□□ -2.1
VPS13YLL040C EOS1P53938 366 aa1.93□□□□□ -2.1
VPS13YLL040C RPL27AP0C2H6 136 aaKnown RBP1.93□□□□□ -2.1
VPS13YLL040C YCR085WP25650 117 aa1.93□□□□□ -2.1
VPS13YLL040C GON7P46984 123 aa1.93□□□□□ -2.1
VPS13YLL040C YPL278CQ08990 100 aa1.93□□□□□ -2.1
VPS13YLL040C AYT1Q12226 474 aa1.93□□□□□ -2.1
VPS13YLL040C NUP53Q03790 475 aa1.93□□□□□ -2.1
VPS13YLL040C ATG39Q06159 398 aa1.93□□□□□ -2.1
VPS13YLL040C YLR042CQ07990 161 aa1.93□□□□□ -2.1
VPS13YLL040C MST28P39552 234 aa1.93□□□□□ -2.1
VPS13YLL040C SEC72P39742 193 aaKnown RBP1.93□□□□□ -2.1
VPS13YLL040C SHH4Q06236 168 aa1.93□□□□□ -2.1
VPS13YLL040C YER134CP40081 178 aa1.93□□□□□ -2.1
VPS13YLL040C RPS16AP0CX51 143 aaKnown RBP1.92□□□□□ -2.1
VPS13YLL040C RPS16BP0CX52 143 aaKnown RBP1.92□□□□□ -2.1
VPS13YLL040C YJL027CP47063 138 aaPredicted RBP1.92□□□□□ -2.1
VPS13YLL040C AIM19P40502 157 aa1.92□□□□□ -2.1
VPS13YLL040C PBP4Q07362 185 aaKnown RBP1.92□□□□□ -2.1
VPS13YLL040C SIP18P50263 79 aa1.92□□□□□ -2.1
VPS13YLL040C MXR2P25566 168 aa1.92□□□□□ -2.1
VPS13YLL040C IES6P32617 166 aa1.92□□□□□ -2.1
VPS13YLL040C YKL070WP36087 169 aa1.92□□□□□ -2.1
VPS13YLL040C TSA2Q04120 196 aa1.92□□□□□ -2.1
VPS13YLL040C YFR045WP43617 309 aa1.92□□□□□ -2.1
VPS13YLL040C CRZ1P53968 678 aa1.92□□□□□ -2.1
VPS13YLL040C RPL21AQ02753 160 aaKnown RBP1.92□□□□□ -2.1
VPS13YLL040C ELC1Q03071 99 aa1.92□□□□□ -2.1
VPS13YLL040C YMR007WQ03675 126 aa1.92□□□□□ -2.1
VPS13YLL040C TIM22Q12328 207 aa1.92□□□□□ -2.1
VPS13YLL040C RPL21BQ12672 160 aaKnown RBP1.92□□□□□ -2.1
VPS13YLL040C YHR213WP0CI67 198 aa1.92□□□□□ -2.1
VPS13YLL040C PHD1P36093 366 aa1.92□□□□□ -2.1
VPS13YLL040C ALG14P38242 237 aa1.92□□□□□ -2.1
VPS13YLL040C SNA4Q07549 140 aa1.92□□□□□ -2.1
VPS13YLL040C GAT3Q07928 141 aa1.92□□□□□ -2.1
VPS13YLL040C CPR2P23285 205 aa1.92□□□□□ -2.1
VPS13YLL040C GEP5Q12393 293 aa1.92□□□□□ -2.1
VPS13YLL040C NAS2P40555 220 aa1.91□□□□□ -2.1
VPS13YLL040C ERV25P54837 211 aaKnown RBP1.91□□□□□ -2.1
VPS13YLL040C GTO3Q04806 366 aa1.91□□□□□ -2.1
VPS13YLL040C ERF2Q06551 359 aa1.91□□□□□ -2.1
VPS13YLL040C PRM3Q08931 133 aa1.91□□□□□ -2.1
VPS13YLL040C CWP1P28319 239 aa1.91□□□□□ -2.1
VPS13YLL040C OM14P38325 134 aa1.91□□□□□ -2.1
VPS13YLL040C PEX17P40155 199 aa1.91□□□□□ -2.1
VPS13YLL040C YDR366CP87287 132 aa1.91□□□□□ -2.1
Retrieved 100 of 5,963 RNA–protein pairs in 51.5 ms