RNA–Protein interactions for RNA: YJR060W

CBF1, Transcript of Basic helix-loop-helix (bHLH) protein, yeastyeast

Gene CBF1, Length 1,056 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CBF1YJR060W MIC27P50945 234 aa4.12□□□□□ -1.75
CBF1YJR060W YGR018CP53211 109 aa4.12□□□□□ -1.75
CBF1YJR060W ORM1P53224 222 aa4.12□□□□□ -1.75
CBF1YJR060W YNR066CP53752 436 aa4.12□□□□□ -1.75
CBF1YJR060W YGL194C-AQ2V2P6 80 aa4.12□□□□□ -1.75
CBF1YJR060W TDH1P00360 332 aaKnown RBP4.11□□□□□ -1.75
CBF1YJR060W PIS1P06197 220 aaKnown RBP4.11□□□□□ -1.75
CBF1YJR060W CDC7P06243 507 aa4.11□□□□□ -1.75
CBF1YJR060W POP5P28005 173 aa4.11□□□□□ -1.75
CBF1YJR060W UPS2P35200 230 aa4.11□□□□□ -1.75
CBF1YJR060W YKL070WP36087 169 aa4.11□□□□□ -1.75
CBF1YJR060W AVT5P38176 459 aa4.11□□□□□ -1.75
CBF1YJR060W SHG1P38337 142 aa4.11□□□□□ -1.75
CBF1YJR060W COX14P39103 70 aa4.11□□□□□ -1.75
CBF1YJR060W YGR269WP40326 108 aa4.11□□□□□ -1.75
CBF1YJR060W AGE2P40529 298 aa4.11□□□□□ -1.75
CBF1YJR060W YFL067WP43537 175 aa4.11□□□□□ -1.75
CBF1YJR060W TAD2P47058 250 aa4.11□□□□□ -1.75
CBF1YJR060W BOR1P53838 576 aa4.11□□□□□ -1.75
CBF1YJR060W SWT21P53873 357 aaPredicted RBP4.11□□□□□ -1.75
CBF1YJR060W IRC23Q08416 157 aa4.11□□□□□ -1.75
CBF1YJR060W TIR2P33890 251 aa4.1□□□□□ -1.75
CBF1YJR060W CSH1P38287 376 aa4.1□□□□□ -1.75
CBF1YJR060W SNX4P47057 423 aa4.1□□□□□ -1.75
CBF1YJR060W YGL185CP53100 379 aa4.1□□□□□ -1.75
CBF1YJR060W PLP1Q04004 230 aa4.1□□□□□ -1.75
CBF1YJR060W CYC3P06182 269 aa4.09□□□□□ -1.75
CBF1YJR060W YHR212W-AP0CX91 67 aa4.09□□□□□ -1.75
CBF1YJR060W MIG1P27705 504 aa4.09□□□□□ -1.75
CBF1YJR060W ALK2P32789 676 aaPredicted RBP4.09□□□□□ -1.75
CBF1YJR060W YJL027CP47063 138 aaPredicted RBP4.09□□□□□ -1.75
CBF1YJR060W LST7P53237 242 aa4.09□□□□□ -1.75
CBF1YJR060W HST4P53688 370 aa4.09□□□□□ -1.75
CBF1YJR060W SHH3Q04487 196 aa4.09□□□□□ -1.75
CBF1YJR060W YCR025CP25352 136 aa4.08□□□□□ -1.76
CBF1YJR060W AHT1P29589 182 aa4.08□□□□□ -1.76
CBF1YJR060W EMP24P32803 203 aaKnown RBP4.08□□□□□ -1.76
CBF1YJR060W YBL059WP34224 193 aa4.08□□□□□ -1.76
CBF1YJR060W DER1P38307 211 aa4.08□□□□□ -1.76
CBF1YJR060W VMA22P38784 181 aa4.08□□□□□ -1.76
CBF1YJR060W PET100P38958 111 aa4.08□□□□□ -1.76
CBF1YJR060W CDC40P40968 455 aaPredicted RBP4.08□□□□□ -1.76
CBF1YJR060W SMD3P43321 101 aaKnown RBP4.08□□□□□ -1.76
CBF1YJR060W CTR3Q06686 241 aa4.08□□□□□ -1.76
CBF1YJR060W ZRC1P20107 442 aa4.07□□□□□ -1.76
CBF1YJR060W SPO13P23624 291 aa4.07□□□□□ -1.76
CBF1YJR060W SFT2P38166 215 aa4.07□□□□□ -1.76
CBF1YJR060W MPC2P38857 129 aa4.07□□□□□ -1.76
CBF1YJR060W SNF11P38956 169 aa4.07□□□□□ -1.76
CBF1YJR060W EMC5P40540 141 aa4.07□□□□□ -1.76
CBF1YJR060W IMP2P46972 177 aa4.07□□□□□ -1.76
CBF1YJR060W YCL001W-AP87012 153 aa4.07□□□□□ -1.76
CBF1YJR060W YMR007WQ03675 126 aa4.07□□□□□ -1.76
CBF1YJR060W YCR024C-BQ3E7Z8 88 aa4.07□□□□□ -1.76
CBF1YJR060W YMR316C-AI2HB70 103 aa4.06□□□□□ -1.76
CBF1YJR060W SDH4P37298 181 aa4.06□□□□□ -1.76
CBF1YJR060W VMA7P39111 118 aa4.06□□□□□ -1.76
CBF1YJR060W SPC25P40014 221 aa4.06□□□□□ -1.76
CBF1YJR060W MRPL49P40858 161 aaPredicted RBP4.06□□□□□ -1.76
CBF1YJR060W KEG1P43614 200 aa4.06□□□□□ -1.76
CBF1YJR060W UBC12P52491 188 aa4.06□□□□□ -1.76
CBF1YJR060W UBC7Q02159 165 aa4.06□□□□□ -1.76
CBF1YJR060W ATC1Q04005 294 aa4.06□□□□□ -1.76
CBF1YJR060W ATG39Q06159 398 aa4.06□□□□□ -1.76
CBF1YJR060W YPL162CQ12042 273 aa4.06□□□□□ -1.76
CBF1YJR060W YOR015WQ12169 119 aa4.06□□□□□ -1.76
CBF1YJR060W COX19Q3E731 98 aa4.06□□□□□ -1.76
CBF1YJR060W HSP12P22943 109 aaKnown RBP4.05□□□□□ -1.76
CBF1YJR060W CDC50P25656 391 aa4.05□□□□□ -1.76
CBF1YJR060W SNU13P39990 126 aaKnown RBP4.05□□□□□ -1.76
CBF1YJR060W LCB3P47013 409 aa4.05□□□□□ -1.76
CBF1YJR060W CAX4P53223 239 aa4.05□□□□□ -1.76
CBF1YJR060W FYV6P53913 173 aa4.05□□□□□ -1.76
CBF1YJR060W AVO2Q04749 426 aa4.05□□□□□ -1.76
CBF1YJR060W FMP16Q12497 93 aa4.05□□□□□ -1.76
CBF1YJR060W YBR298C-AQ8TGK4 73 aa4.05□□□□□ -1.76
CBF1YJR060W TRP1P00912 224 aa4.04□□□□□ -1.76
CBF1YJR060W YHR213WP0CI67 198 aa4.04□□□□□ -1.76
CBF1YJR060W TDA4P47153 279 aa4.04□□□□□ -1.76
CBF1YJR060W ALG13P53178 202 aa4.04□□□□□ -1.76
CBF1YJR060W PAU4P53427 120 aa4.04□□□□□ -1.76
CBF1YJR060W TIM11P81449 96 aaPredicted RBP4.04□□□□□ -1.76
CBF1YJR060W YDR274CP87283 123 aa4.04□□□□□ -1.76
CBF1YJR060W MRX11Q03079 207 aa4.04□□□□□ -1.76
CBF1YJR060W ADD37Q03233 198 aa4.04□□□□□ -1.76
CBF1YJR060W VPS71Q03433 280 aa4.04□□□□□ -1.76
CBF1YJR060W TMA23Q03525 211 aa4.04□□□□□ -1.76
CBF1YJR060W MRPL20P22354 195 aaPredicted RBP4.03□□□□□ -1.76
CBF1YJR060W AGA1P32323 725 aa4.03□□□□□ -1.76
CBF1YJR060W AIM24P47127 394 aa4.03□□□□□ -1.76
CBF1YJR060W GRH1Q04410 372 aaKnown RBP4.03□□□□□ -1.76
CBF1YJR060W COA4Q05809 96 aa4.03□□□□□ -1.76
CBF1YJR060W SDO1Q07953 250 aaKnown RBP4.03□□□□□ -1.76
CBF1YJR060W SME1Q12330 94 aaPredicted RBP4.03□□□□□ -1.76
CBF1YJR060W TAR1Q8TGM6 124 aa4.03□□□□□ -1.76
CBF1YJR060W PAU1P0CE88 120 aa4.02□□□□□ -1.77
CBF1YJR060W PAU14P0CE89 120 aa4.02□□□□□ -1.77
CBF1YJR060W PAU6P0CE90 120 aa4.02□□□□□ -1.77
CBF1YJR060W PAU18P0CE91 120 aa4.02□□□□□ -1.77
CBF1YJR060W PAU8P0CE92 120 aa4.02□□□□□ -1.77
Retrieved 100 of 5,963 RNA–protein pairs in 82.5 ms