RNA–Protein interactions for RNA: YIL030C

SSM4, Transcript of Ubiquitin-protein ligase involved in ER-associated protein degradation, yeastyeast

Gene SSM4, Length 3,960 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSM4YIL030C POC4Q12245 148 aaPredicted RBP2.88□□□□□ -1.95
SSM4YIL030C YOR192C-CQ3E736 78 aa2.88□□□□□ -1.95
SSM4YIL030C FIG1P38224 298 aa2.88□□□□□ -1.95
SSM4YIL030C YJL163CP46996 555 aa2.88□□□□□ -1.95
SSM4YIL030C ERV25P54837 211 aaKnown RBP2.88□□□□□ -1.95
SSM4YIL030C YMR317WQ04893 1140 aa2.88□□□□□ -1.95
SSM4YIL030C COX2P00410 251 aa2.87□□□□□ -1.95
SSM4YIL030C MRPS12P53732 153 aa2.87□□□□□ -1.95
SSM4YIL030C RIM9Q04734 239 aa2.87□□□□□ -1.95
SSM4YIL030C RKI1Q12189 258 aa2.87□□□□□ -1.95
SSM4YIL030C URA5P13298 226 aaKnown RBP2.87□□□□□ -1.95
SSM4YIL030C IMP1P28627 190 aa2.87□□□□□ -1.95
SSM4YIL030C SNF11P38956 169 aa2.87□□□□□ -1.95
SSM4YIL030C YNR077CP53758 84 aa2.87□□□□□ -1.95
SSM4YIL030C FZF1P32805 299 aa2.87□□□□□ -1.95
SSM4YIL030C YPI1P43587 155 aa2.87□□□□□ -1.95
SSM4YIL030C COA3Q3E7B2 85 aa2.87□□□□□ -1.95
SSM4YIL030C PET8P38921 284 aa2.86□□□□□ -1.95
SSM4YIL030C GON7P46984 123 aa2.86□□□□□ -1.95
SSM4YIL030C WTM2Q12206 467 aa2.86□□□□□ -1.95
SSM4YIL030C YPR053CQ6Q5F3 151 aa2.86□□□□□ -1.95
SSM4YIL030C RPL27BP0C2H7 136 aaKnown RBP2.86□□□□□ -1.95
SSM4YIL030C YDL022C-AP0C5L6 82 aa2.86□□□□□ -1.95
SSM4YIL030C ARO2P28777 376 aaKnown RBP2.86□□□□□ -1.95
SSM4YIL030C PRE3P38624 215 aa2.86□□□□□ -1.95
SSM4YIL030C THG1P53215 237 aaKnown RBP2.86□□□□□ -1.95
SSM4YIL030C LDS2Q08218 356 aa2.86□□□□□ -1.95
SSM4YIL030C FCF2Q12035 217 aaPredicted RBP2.86□□□□□ -1.95
SSM4YIL030C FAS1P07149 2051 aaKnown RBP2.86□□□□□ -1.95
SSM4YIL030C GEP7P53171 287 aa2.86□□□□□ -1.95
SSM4YIL030C MSA1Q08471 629 aa2.86□□□□□ -1.95
SSM4YIL030C YDR215CQ12240 137 aa2.86□□□□□ -1.95
SSM4YIL030C RDL1Q12305 139 aaKnown RBP2.86□□□□□ -1.95
SSM4YIL030C YPT10P38146 199 aa2.85□□□□□ -1.95
SSM4YIL030C YBR090CP38253 122 aa2.85□□□□□ -1.95
SSM4YIL030C CUE1P38428 203 aa2.85□□□□□ -1.95
SSM4YIL030C YML122CQ03207 126 aa2.85□□□□□ -1.95
SSM4YIL030C SWT1Q12104 458 aa2.85□□□□□ -1.95
SSM4YIL030C YAL064W-BO13512 126 aa2.85□□□□□ -1.95
SSM4YIL030C MRPL39P36533 70 aa2.85□□□□□ -1.95
SSM4YIL030C YEL057CP39983 233 aa2.85□□□□□ -1.95
SSM4YIL030C SGN1P40561 250 aaKnown RBP RIP-Chip data2.85□□□□□ -1.95not detected
SSM4YIL030C MIX14Q04341 121 aa2.85□□□□□ -1.95
SSM4YIL030C POM34Q12445 299 aa2.85□□□□□ -1.95
SSM4YIL030C RPL7AP05737 244 aaKnown RBP2.85□□□□□ -1.95
SSM4YIL030C RPS8AP0CX39 200 aaKnown RBP2.85□□□□□ -1.95
SSM4YIL030C RPS8BP0CX40 200 aaKnown RBP2.85□□□□□ -1.95
SSM4YIL030C RPA12P32529 125 aaKnown RBP2.85□□□□□ -1.95
SSM4YIL030C YDL183CP48569 320 aa2.85□□□□□ -1.95
SSM4YIL030C SKO1Q02100 647 aa2.85□□□□□ -1.95
SSM4YIL030C PBP4Q07362 185 aaKnown RBP2.85□□□□□ -1.95
SSM4YIL030C TIM18Q08749 192 aa2.85□□□□□ -1.95
SSM4YIL030C RPL7BQ12213 244 aaKnown RBP2.85□□□□□ -1.95
SSM4YIL030C YKR032WP36127 104 aa2.85□□□□□ -1.95
SSM4YIL030C YFL015CP43578 164 aa2.85□□□□□ -1.95
SSM4YIL030C YNL092WP53934 400 aa2.85□□□□□ -1.95
SSM4YIL030C YIL014C-AQ02598 104 aa2.85□□□□□ -1.95
SSM4YIL030C DPB4Q04603 196 aaKnown RBP2.85□□□□□ -1.95
SSM4YIL030C RPP2BP02400 110 aaKnown RBP2.84□□□□□ -1.95
SSM4YIL030C STE4P18851 423 aa2.84□□□□□ -1.95
SSM4YIL030C YER084WP40057 128 aa2.84□□□□□ -1.95
SSM4YIL030C WSC3Q12215 556 aa2.84□□□□□ -1.95
SSM4YIL030C YLR363W-AQ3E747 85 aa2.84□□□□□ -1.95
SSM4YIL030C AIM29P36154 155 aa2.84□□□□□ -1.96
SSM4YIL030C YNL046WP53956 172 aa2.84□□□□□ -1.96
SSM4YIL030C DPP1Q05521 289 aa2.84□□□□□ -1.96
SSM4YIL030C CCW12Q12127 133 aa2.84□□□□□ -1.96
SSM4YIL030C SME1Q12330 94 aaPredicted RBP2.84□□□□□ -1.96
SSM4YIL030C ARF1P11076 181 aaKnown RBP2.84□□□□□ -1.96
SSM4YIL030C ATF1P40353 525 aa2.84□□□□□ -1.96
SSM4YIL030C CIS3P47001 227 aa2.84□□□□□ -1.96
SSM4YIL030C CGI121Q03705 181 aaKnown RBP2.84□□□□□ -1.96
SSM4YIL030C RAV2Q03956 351 aa2.84□□□□□ -1.96
SSM4YIL030C DGA1Q08650 418 aa2.84□□□□□ -1.96
SSM4YIL030C RFM1Q12192 310 aa2.84□□□□□ -1.96
SSM4YIL030C YLL053CP0CD98 152 aa2.83□□□□□ -1.96
SSM4YIL030C BET2P20133 325 aa2.83□□□□□ -1.96
SSM4YIL030C YNL194CP40169 301 aa2.83□□□□□ -1.96
SSM4YIL030C GLC8P41818 229 aa2.83□□□□□ -1.96
SSM4YIL030C YDR209CQ03480 137 aa2.83□□□□□ -1.96
SSM4YIL030C YDR381C-AQ3E6R5 114 aa2.83□□□□□ -1.96
SSM4YIL030C Q0255P03881 472 aa2.83□□□□□ -1.96
SSM4YIL030C AQY1P0CD91 305 aa2.83□□□□□ -1.96
SSM4YIL030C YOL024WQ08172 172 aa2.83□□□□□ -1.96
SSM4YIL030C CCW14O13547 238 aa2.83□□□□□ -1.96
SSM4YIL030C RPP2AP05319 106 aaKnown RBP2.83□□□□□ -1.96
SSM4YIL030C MRS3P10566 314 aa2.83□□□□□ -1.96
SSM4YIL030C SPT15P13393 240 aaKnown RBP2.83□□□□□ -1.96
SSM4YIL030C ERG8P24521 451 aa2.83□□□□□ -1.96
SSM4YIL030C SOR1P35497 357 aaKnown RBP2.83□□□□□ -1.96
SSM4YIL030C YJL193WP39542 402 aa2.83□□□□□ -1.96
SSM4YIL030C SSU72P53538 206 aaPredicted RBP2.83□□□□□ -1.96
SSM4YIL030C YNR071CP53757 342 aa2.83□□□□□ -1.96
SSM4YIL030C POP3P53833 195 aaPredicted RBP2.83□□□□□ -1.96
SSM4YIL030C DYN2Q02647 92 aa2.83□□□□□ -1.96
SSM4YIL030C SHH4Q06236 168 aa2.83□□□□□ -1.96
SSM4YIL030C SOR2Q07786 357 aa2.83□□□□□ -1.96
SSM4YIL030C NCE102Q12207 173 aaRIP-Chip data2.83□□□□□ -1.96not detected
SSM4YIL030C Q0144Q9ZZW2 109 aa2.83□□□□□ -1.96
SSM4YIL030C YGL010WP25338 174 aa2.82□□□□□ -1.96
Retrieved 100 of 5,963 RNA–protein pairs in 101 ms