RNA–Protein interactions for RNA: YHR066W

SSF1, Transcript of Constituent of 66S pre-ribosomal particles, yeastyeast

Gene SSF1, Length 1,362 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSF1YHR066W YDR524C-BQ3E6R4 66 aa1.49□□□□□ -2.17
SSF1YHR066W YHR086W-AQ3E746 53 aa1.49□□□□□ -2.17
SSF1YHR066W ATP5P09457 212 aa1.48□□□□□ -2.17
SSF1YHR066W NSP1P14907 823 aaKnown RBP1.48□□□□□ -2.17
SSF1YHR066W YOR062CP36025 268 aa1.48□□□□□ -2.17
SSF1YHR066W SPC25P40014 221 aa1.48□□□□□ -2.17
SSF1YHR066W AGE2P40529 298 aa1.48□□□□□ -2.17
SSF1YHR066W RPL33BP41056 107 aaKnown RBP1.48□□□□□ -2.17
SSF1YHR066W GLR1P41921 483 aaKnown RBP1.48□□□□□ -2.17
SSF1YHR066W FIP1P45976 327 aa1.48□□□□□ -2.17
SSF1YHR066W MRPS8Q03799 155 aa1.48□□□□□ -2.17
SSF1YHR066W ATP20Q12233 115 aa1.48□□□□□ -2.17
SSF1YHR066W YOR214CQ12282 236 aa1.48□□□□□ -2.17
SSF1YHR066W YET1P35723 206 aa1.47□□□□□ -2.17
SSF1YHR066W SHE2P36068 246 aaKnown RBP RIP-Chip data1.47□□□□□ -2.17not detected
SSF1YHR066W NSA2P40078 261 aaKnown RBP1.47□□□□□ -2.17
SSF1YHR066W CCC1P47818 322 aa1.47□□□□□ -2.17
SSF1YHR066W TIM13P53299 105 aa1.47□□□□□ -2.17
SSF1YHR066W YNR077CP53758 84 aa1.47□□□□□ -2.17
SSF1YHR066W DIG2Q03373 323 aaKnown RBP1.47□□□□□ -2.17
SSF1YHR066W HRD1Q08109 551 aa1.47□□□□□ -2.17
SSF1YHR066W YLR361C-AQ3E795 98 aa1.47□□□□□ -2.17
SSF1YHR066W RIB3Q99258 208 aa1.47□□□□□ -2.17
SSF1YHR066W ATG40Q99325 256 aa1.47□□□□□ -2.17
SSF1YHR066W POL2P21951 2222 aaKnown RBP1.47□□□□□ -2.17
SSF1YHR066W FZF1P32805 299 aa1.47□□□□□ -2.17
SSF1YHR066W ERV15P38312 142 aa1.47□□□□□ -2.17
SSF1YHR066W YBR220CP38318 560 aa1.47□□□□□ -2.17
SSF1YHR066W YER181CP40097 107 aa1.47□□□□□ -2.17
SSF1YHR066W YPL073CP40323 161 aa1.47□□□□□ -2.17
SSF1YHR066W TIR3P40552 269 aa1.47□□□□□ -2.17
SSF1YHR066W CUP9P41817 306 aa1.47□□□□□ -2.17
SSF1YHR066W YFR054CP43622 192 aa1.47□□□□□ -2.17
SSF1YHR066W CIS3P47001 227 aa1.47□□□□□ -2.17
SSF1YHR066W BAT2P47176 376 aaKnown RBP1.47□□□□□ -2.17
SSF1YHR066W SBH1P52870 82 aa1.47□□□□□ -2.17
SSF1YHR066W BOL2P53082 120 aa1.47□□□□□ -2.17
SSF1YHR066W YKR005CQ02203 525 aa1.47□□□□□ -2.17
SSF1YHR066W YMR295CQ03559 197 aa1.47□□□□□ -2.17
SSF1YHR066W SHH3Q04487 196 aa1.47□□□□□ -2.17
SSF1YHR066W YMR253CQ04835 414 aa1.47□□□□□ -2.17
SSF1YHR066W PST2Q12335 198 aaKnown RBP1.47□□□□□ -2.17
SSF1YHR066W UBR1P19812 1950 aa1.46□□□□□ -2.18
SSF1YHR066W PHO85P17157 305 aa1.46□□□□□ -2.18
SSF1YHR066W HSP30P25619 332 aa1.46□□□□□ -2.18
SSF1YHR066W PAM17P36147 197 aa1.46□□□□□ -2.18
SSF1YHR066W RRT1P38192 103 aa1.46□□□□□ -2.18
SSF1YHR066W YEL028WP39989 153 aa1.46□□□□□ -2.18
SSF1YHR066W PHB1P40961 287 aa1.46□□□□□ -2.18
SSF1YHR066W VPS28Q02767 242 aa1.46□□□□□ -2.18
SSF1YHR066W COF1Q03048 143 aaKnown RBP1.46□□□□□ -2.18
SSF1YHR066W MEU1Q07938 337 aaKnown RBP RIP-Chip data1.46□□□□□ -2.18not detected
SSF1YHR066W IRC23Q08416 157 aa1.46□□□□□ -2.18
SSF1YHR066W HFA1P32874 2273 aa1.45□□□□□ -2.18
SSF1YHR066W MEC1P38111 2368 aa1.45□□□□□ -2.18
SSF1YHR066W YLR236CA0A023PZG4 107 aa1.45□□□□□ -2.18
SSF1YHR066W RAS2P01120 322 aaKnown RBP1.45□□□□□ -2.18
SSF1YHR066W RAD6P06104 172 aa1.45□□□□□ -2.18
SSF1YHR066W SCL1P21243 252 aaKnown RBP1.45□□□□□ -2.18
SSF1YHR066W PEX4P29340 183 aa1.45□□□□□ -2.18
SSF1YHR066W SPT14P32363 452 aa1.45□□□□□ -2.18
SSF1YHR066W PTC1P35182 281 aa1.45□□□□□ -2.18
SSF1YHR066W PHO88P38264 188 aaPredicted RBP1.45□□□□□ -2.18
SSF1YHR066W VMA22P38784 181 aa1.45□□□□□ -2.18
SSF1YHR066W HTD2P38790 280 aaKnown RBP1.45□□□□□ -2.18
SSF1YHR066W SVP26P38869 228 aa1.45□□□□□ -2.18
SSF1YHR066W YNL217WP40152 326 aa1.45□□□□□ -2.18
SSF1YHR066W YGL193CP53097 103 aa1.45□□□□□ -2.18
SSF1YHR066W YNL033WP53964 284 aa1.45□□□□□ -2.18
SSF1YHR066W DAD3P69850 94 aa1.45□□□□□ -2.18
SSF1YHR066W UBC7Q02159 165 aa1.45□□□□□ -2.18
SSF1YHR066W DYN2Q02647 92 aa1.45□□□□□ -2.18
SSF1YHR066W YDR102CQ03864 110 aa1.45□□□□□ -2.18
SSF1YHR066W SYM1Q06563 197 aa1.45□□□□□ -2.18
SSF1YHR066W RFU1Q08003 200 aa1.45□□□□□ -2.18
SSF1YHR066W SUA7P29055 345 aaPredicted RBP1.44□□□□□ -2.18
SSF1YHR066W YRA2P36036 203 aaKnown RBP RIP-Chip data1.44□□□□□ -2.18not detected
SSF1YHR066W MRPL24P36525 258 aaPredicted RBP1.44□□□□□ -2.18
SSF1YHR066W YBR209WP38311 105 aa1.44□□□□□ -2.18
SSF1YHR066W PRS3P38689 320 aaKnown RBP1.44□□□□□ -2.18
SSF1YHR066W TVP23P38962 199 aa1.44□□□□□ -2.18
SSF1YHR066W YJL218WP40892 196 aaKnown RBP1.44□□□□□ -2.18
SSF1YHR066W TIM8P57744 87 aa1.44□□□□□ -2.18
SSF1YHR066W YDR366CP87287 132 aa1.44□□□□□ -2.18
SSF1YHR066W RNH202Q05635 350 aa1.44□□□□□ -2.18
SSF1YHR066W YPD1Q07688 167 aa1.44□□□□□ -2.18
SSF1YHR066W YOR381W-AQ3E804 55 aa1.44□□□□□ -2.18
SSF1YHR066W NHP6AP11632 93 aaKnown RBP1.43□□□□□ -2.18
SSF1YHR066W PHO13P19881 312 aa1.43□□□□□ -2.18
SSF1YHR066W RPC19P28000 142 aaKnown RBP1.43□□□□□ -2.18
SSF1YHR066W YEL073CP39974 107 aa1.43□□□□□ -2.18
SSF1YHR066W MOB1P40484 314 aa1.43□□□□□ -2.18
SSF1YHR066W YGR039WP53225 103 aa1.43□□□□□ -2.18
SSF1YHR066W POP3P53833 195 aaPredicted RBP1.43□□□□□ -2.18
SSF1YHR066W FMN1Q03778 218 aa1.43□□□□□ -2.18
SSF1YHR066W YDR391CQ04170 232 aa1.43□□□□□ -2.18
SSF1YHR066W CUE4Q04201 117 aaPredicted RBP1.43□□□□□ -2.18
SSF1YHR066W RAD50P12753 1312 aa1.43□□□□□ -2.18
SSF1YHR066W DDI2P0CH63 225 aa1.42□□□□□ -2.18
SSF1YHR066W DDI3P0CH64 225 aa1.42□□□□□ -2.18
Retrieved 100 of 5,963 RNA–protein pairs in 86.1 ms