RNA–Protein interactions for RNA: YGR074W

SMD1, Transcript of Core Sm protein Sm D1, yeastyeast

Gene SMD1, Length 441 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SMD1YGR074W YEL014CP39999 101 aa1.01□□□□□ -2.25
SMD1YGR074W RBL2P48606 106 aaKnown RBP1.01□□□□□ -2.25
SMD1YGR074W HHO1P53551 258 aa1.01□□□□□ -2.25
SMD1YGR074W RCF2P53721 224 aa1.01□□□□□ -2.25
SMD1YGR074W FIT1Q04433 528 aa1.01□□□□□ -2.25
SMD1YGR074W YDL241WQ07738 123 aa1.01□□□□□ -2.25
SMD1YGR074W CDC39P25655 2108 aaKnown RBP1.01□□□□□ -2.25
SMD1YGR074W MRS4P23500 304 aa1□□□□□ -2.25
SMD1YGR074W SPT14P32363 452 aa1□□□□□ -2.25
SMD1YGR074W YJL218WP40892 196 aaKnown RBP1□□□□□ -2.25
SMD1YGR074W APS3P47064 194 aa1□□□□□ -2.25
SMD1YGR074W YDC1Q02896 317 aa1□□□□□ -2.25
SMD1YGR074W AVO2Q04749 426 aa1□□□□□ -2.25
SMD1YGR074W RFU1Q08003 200 aa1□□□□□ -2.25
SMD1YGR074W HSP12P22943 109 aaKnown RBP0.99□□□□□ -2.25
SMD1YGR074W RPC19P28000 142 aaKnown RBP0.99□□□□□ -2.25
SMD1YGR074W SRP21P32342 167 aa0.99□□□□□ -2.25
SMD1YGR074W SUI1P32911 108 aaKnown RBP0.99□□□□□ -2.25
SMD1YGR074W SHB17P36136 271 aaKnown RBP0.99□□□□□ -2.25
SMD1YGR074W YFL051CP43552 160 aa0.99□□□□□ -2.25
SMD1YGR074W SPG1P50088 95 aa0.99□□□□□ -2.25
SMD1YGR074W YGL230CP53074 147 aa0.99□□□□□ -2.25
SMD1YGR074W YPR153WQ06537 140 aa0.99□□□□□ -2.25
SMD1YGR074W IRC19Q07843 230 aa0.99□□□□□ -2.25
SMD1YGR074W FCY1Q12178 158 aa0.99□□□□□ -2.25
SMD1YGR074W KIN28P06242 306 aa0.98□□□□□ -2.25
SMD1YGR074W AQY2P0CD90 149 aa0.98□□□□□ -2.25
SMD1YGR074W HYP2P23301 157 aaKnown RBP0.98□□□□□ -2.25
SMD1YGR074W YKR070WP36151 352 aaKnown RBP0.98□□□□□ -2.25
SMD1YGR074W YHL037CP38733 133 aa0.98□□□□□ -2.25
SMD1YGR074W YGR201CP42936 225 aa0.98□□□□□ -2.25
SMD1YGR074W DCV1P43595 202 aa0.98□□□□□ -2.25
SMD1YGR074W VMA10P48836 114 aaKnown RBP0.98□□□□□ -2.25
SMD1YGR074W YGR039WP53225 103 aa0.98□□□□□ -2.25
SMD1YGR074W COF1Q03048 143 aaKnown RBP0.98□□□□□ -2.25
SMD1YGR074W YPR203WQ08994 102 aa0.98□□□□□ -2.25
SMD1YGR074W HUT1Q12520 339 aa0.98□□□□□ -2.25
SMD1YGR074W SCS22Q6Q595 175 aa0.98□□□□□ -2.25
SMD1YGR074W DDR48P18899 430 aaKnown RBP0.97□□□□□ -2.25
SMD1YGR074W HSP150P32478 413 aa0.97□□□□□ -2.25
SMD1YGR074W YAR064WP39563 99 aa0.97□□□□□ -2.25
SMD1YGR074W HUA1P40325 198 aa0.97□□□□□ -2.25
SMD1YGR074W YIL102CP40488 101 aa0.97□□□□□ -2.25
SMD1YGR074W RAF1Q06891 181 aa0.97□□□□□ -2.25
SMD1YGR074W NHP6AP11632 93 aaKnown RBP0.96□□□□□ -2.26
SMD1YGR074W SRL3P36167 246 aa0.96□□□□□ -2.26
SMD1YGR074W GIM4P40005 111 aaKnown RBP0.96□□□□□ -2.26
SMD1YGR074W PHB1P40961 287 aa0.96□□□□□ -2.26
SMD1YGR074W LSM8P47093 109 aaKnown RBP0.96□□□□□ -2.26
SMD1YGR074W DIE2P50076 525 aa0.96□□□□□ -2.26
SMD1YGR074W YGL204CP53089 101 aa0.96□□□□□ -2.26
SMD1YGR074W CSN9Q03981 162 aa0.96□□□□□ -2.26
SMD1YGR074W YMR320WQ04897 101 aa0.96□□□□□ -2.26
SMD1YGR074W SPC3Q12133 184 aa0.96□□□□□ -2.26
SMD1YGR074W YBR027CP38220 110 aa0.95□□□□□ -2.26
SMD1YGR074W POP7P38291 140 aa0.95□□□□□ -2.26
SMD1YGR074W CYC2P38909 366 aa0.95□□□□□ -2.26
SMD1YGR074W IPT1P38954 527 aa0.95□□□□□ -2.26
SMD1YGR074W GLC8P41818 229 aa0.95□□□□□ -2.26
SMD1YGR074W EMC4P53073 190 aa0.95□□□□□ -2.26
SMD1YGR074W YGR042WP53227 271 aa0.95□□□□□ -2.26
SMD1YGR074W GPI11Q06636 219 aa0.95□□□□□ -2.26
SMD1YGR074W CMC4Q3E7A9 73 aa0.95□□□□□ -2.26
SMD1YGR074W DDP1Q99321 188 aaKnown RBP0.95□□□□□ -2.26
SMD1YGR074W RPL37AP49166 88 aaKnown RBP0.94□□□□□ -2.26
SMD1YGR074W SED1Q01589 338 aa0.94□□□□□ -2.26
SMD1YGR074W SPC2Q04969 178 aa0.94□□□□□ -2.26
SMD1YGR074W YDR278CQ05612 105 aa0.94□□□□□ -2.26
SMD1YGR074W GSC2P40989 1895 aa0.94□□□□□ -2.26
SMD1YGR074W MRPL44P19956 98 aa0.93□□□□□ -2.26
SMD1YGR074W RPS1BP23248 255 aaKnown RBP0.93□□□□□ -2.26
SMD1YGR074W SUA7P29055 345 aaPredicted RBP0.93□□□□□ -2.26
SMD1YGR074W SOM1Q05676 74 aa0.93□□□□□ -2.26
SMD1YGR074W NAT5Q08689 176 aa0.93□□□□□ -2.26
SMD1YGR074W ATP14Q12349 124 aa0.93□□□□□ -2.26
SMD1YGR074W RIB3Q99258 208 aa0.93□□□□□ -2.26
SMD1YGR074W ANB1P19211 157 aa0.92□□□□□ -2.26
SMD1YGR074W YHR140WP38842 239 aa0.92□□□□□ -2.26
SMD1YGR074W MPC1P53157 130 aaKnown RBP0.92□□□□□ -2.26
SMD1YGR074W YGR017WP53210 297 aa0.92□□□□□ -2.26
SMD1YGR074W YNL122CP53921 115 aaPredicted RBP0.92□□□□□ -2.26
SMD1YGR074W YNL019CP53975 284 aa0.92□□□□□ -2.26
SMD1YGR074W IRC21Q04772 201 aa0.92□□□□□ -2.26
SMD1YGR074W YOR072WQ08486 104 aa0.92□□□□□ -2.26
SMD1YGR074W YNL277W-AQ3E7Z0 62 aa0.92□□□□□ -2.26
SMD1YGR074W HSL1P34244 1518 aa0.92□□□□□ -2.26
SMD1YGR074W FMP49A0A023PZB3 126 aa0.91□□□□□ -2.26
SMD1YGR074W COX5BP00425 151 aa0.91□□□□□ -2.26
SMD1YGR074W RPL33AP05744 107 aaKnown RBP0.91□□□□□ -2.26
SMD1YGR074W FYV5P25585 152 aa0.91□□□□□ -2.26
SMD1YGR074W YOR385WQ08909 290 aa0.91□□□□□ -2.26
SMD1YGR074W CCW12Q12127 133 aa0.91□□□□□ -2.26
SMD1YGR074W YCR001WP25347 104 aa0.9□□□□□ -2.27
SMD1YGR074W RPS20P38701 121 aaKnown RBP0.9□□□□□ -2.27
SMD1YGR074W YJL009WP47078 108 aa0.9□□□□□ -2.27
SMD1YGR074W YCL001W-AP87012 153 aa0.9□□□□□ -2.27
SMD1YGR074W TMA23Q03525 211 aa0.9□□□□□ -2.27
SMD1YGR074W MHF1Q3E835 90 aa0.9□□□□□ -2.27
SMD1YGR074W Q0144Q9ZZW2 109 aa0.9□□□□□ -2.27
SMD1YGR074W SFT2P38166 215 aa0.89□□□□□ -2.27
Retrieved 100 of 5,963 RNA–protein pairs in 73.4 ms