RNA–Protein interactions for RNA: YFR002W

NIC96, Transcript of Linker nucleoporin component of the nuclear pore complex (NPC), yeastyeast

Gene NIC96, Length 2,520 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NIC96YFR002W POR1P04840 283 aaKnown RBP1.45□□□□□ -2.18
NIC96YFR002W CPA1P07258 411 aaKnown RBP1.45□□□□□ -2.18
NIC96YFR002W PBI2P0CT04 75 aaKnown RBP1.45□□□□□ -2.18
NIC96YFR002W KRE1P17260 313 aa1.45□□□□□ -2.18
NIC96YFR002W SCM4P32564 187 aa1.45□□□□□ -2.18
NIC96YFR002W PRS3P38689 320 aaKnown RBP1.45□□□□□ -2.18
NIC96YFR002W PGD1P40356 397 aa1.45□□□□□ -2.18
NIC96YFR002W RBL2P48606 106 aaKnown RBP1.45□□□□□ -2.18
NIC96YFR002W DOC1P53068 250 aa1.45□□□□□ -2.18
NIC96YFR002W YNR077CP53758 84 aa1.45□□□□□ -2.18
NIC96YFR002W NEJ1Q06148 342 aa1.45□□□□□ -2.18
NIC96YFR002W TIR1P10863 254 aa1.45□□□□□ -2.18
NIC96YFR002W SEN2P16658 377 aa1.45□□□□□ -2.18
NIC96YFR002W UMP1P38293 148 aa1.45□□□□□ -2.18
NIC96YFR002W DLS1P40366 167 aa1.45□□□□□ -2.18
NIC96YFR002W GLR1P41921 483 aaKnown RBP1.45□□□□□ -2.18
NIC96YFR002W ERJ5P43613 295 aaPredicted RBP1.45□□□□□ -2.18
NIC96YFR002W YJR146WP47174 117 aa1.45□□□□□ -2.18
NIC96YFR002W RAV2Q03956 351 aa1.45□□□□□ -2.18
NIC96YFR002W CSN9Q03981 162 aa1.45□□□□□ -2.18
NIC96YFR002W RFU1Q08003 200 aa1.45□□□□□ -2.18
NIC96YFR002W HRD1Q08109 551 aa1.45□□□□□ -2.18
NIC96YFR002W YLR361C-AQ3E795 98 aa1.45□□□□□ -2.18
NIC96YFR002W YBR285WP38354 144 aa1.44□□□□□ -2.18
NIC96YFR002W YJL027CP47063 138 aaPredicted RBP1.44□□□□□ -2.18
NIC96YFR002W HHT1P61830 136 aa1.44□□□□□ -2.18
NIC96YFR002W PIR1Q03178 341 aa1.44□□□□□ -2.18
NIC96YFR002W GAL83Q04739 417 aa1.44□□□□□ -2.18
NIC96YFR002W ATP5P09457 212 aa1.44□□□□□ -2.18
NIC96YFR002W YPL073CP40323 161 aa1.44□□□□□ -2.18
NIC96YFR002W YFR054CP43622 192 aa1.44□□□□□ -2.18
NIC96YFR002W DIG2Q03373 323 aaKnown RBP1.44□□□□□ -2.18
NIC96YFR002W VPS71Q03433 280 aa1.44□□□□□ -2.18
NIC96YFR002W MIX17Q03667 156 aa1.44□□□□□ -2.18
NIC96YFR002W SPC24Q04477 213 aa1.44□□□□□ -2.18
NIC96YFR002W YDR114CQ04597 100 aa1.44□□□□□ -2.18
NIC96YFR002W ATG10Q07879 167 aa1.44□□□□□ -2.18
NIC96YFR002W ATP20Q12233 115 aa1.44□□□□□ -2.18
NIC96YFR002W YOR214CQ12282 236 aa1.44□□□□□ -2.18
NIC96YFR002W FLO9P39712 1322 aa1.44□□□□□ -2.18
NIC96YFR002W RPL26AP05743 127 aaKnown RBP1.43□□□□□ -2.18
NIC96YFR002W SNC2P33328 115 aa1.43□□□□□ -2.18
NIC96YFR002W TRS20P38334 175 aa1.43□□□□□ -2.18
NIC96YFR002W RPL26BP53221 127 aaKnown RBP1.43□□□□□ -2.18
NIC96YFR002W TIM8P57744 87 aa1.43□□□□□ -2.18
NIC96YFR002W FSF1Q12029 327 aaKnown RBP1.43□□□□□ -2.18
NIC96YFR002W PST2Q12335 198 aaKnown RBP1.43□□□□□ -2.18
NIC96YFR002W SPT14P32363 452 aa1.43□□□□□ -2.18
NIC96YFR002W YBR220CP38318 560 aa1.43□□□□□ -2.18
NIC96YFR002W YER137CP40083 148 aaKnown RBP1.43□□□□□ -2.18
NIC96YFR002W GLC8P41818 229 aa1.43□□□□□ -2.18
NIC96YFR002W BOL2P53082 120 aa1.43□□□□□ -2.18
NIC96YFR002W RCF2P53721 224 aa1.43□□□□□ -2.18
NIC96YFR002W YNR062CP53748 327 aa1.43□□□□□ -2.18
NIC96YFR002W DYN2Q02647 92 aa1.43□□□□□ -2.18
NIC96YFR002W FMN1Q03778 218 aa1.43□□□□□ -2.18
NIC96YFR002W NSP1P14907 823 aaKnown RBP1.42□□□□□ -2.18
NIC96YFR002W SPC25P40014 221 aa1.42□□□□□ -2.18
NIC96YFR002W YER181CP40097 107 aa1.42□□□□□ -2.18
NIC96YFR002W YJL218WP40892 196 aaKnown RBP1.42□□□□□ -2.18
NIC96YFR002W PHO85P17157 305 aa1.42□□□□□ -2.18
NIC96YFR002W FZF1P32805 299 aa1.42□□□□□ -2.18
NIC96YFR002W SHE2P36068 246 aaKnown RBP RIP-Chip data1.42□□□□□ -2.18not detected
NIC96YFR002W PAM17P36147 197 aa1.42□□□□□ -2.18
NIC96YFR002W PHB1P40961 287 aa1.42□□□□□ -2.18
NIC96YFR002W CCC1P47818 322 aa1.42□□□□□ -2.18
NIC96YFR002W VMA10P48836 114 aaKnown RBP1.42□□□□□ -2.18
NIC96YFR002W SBH1P52870 82 aa1.42□□□□□ -2.18
NIC96YFR002W SLM2P53955 656 aa1.42□□□□□ -2.18
NIC96YFR002W UBC7Q02159 165 aa1.42□□□□□ -2.18
NIC96YFR002W YKR005CQ02203 525 aa1.42□□□□□ -2.18
NIC96YFR002W YGR035W-AQ45U48 73 aa1.42□□□□□ -2.18
NIC96YFR002W SUA7P29055 345 aaPredicted RBP1.41□□□□□ -2.18
NIC96YFR002W PTC1P35182 281 aa1.41□□□□□ -2.18
NIC96YFR002W YET1P35723 206 aa1.41□□□□□ -2.18
NIC96YFR002W YRA2P36036 203 aaKnown RBP RIP-Chip data1.41□□□□□ -2.18not detected
NIC96YFR002W RRT1P38192 103 aa1.41□□□□□ -2.18
NIC96YFR002W NSA2P40078 261 aaKnown RBP1.41□□□□□ -2.18
NIC96YFR002W RPL33BP41056 107 aaKnown RBP1.41□□□□□ -2.18
NIC96YFR002W COF1Q03048 143 aaKnown RBP1.41□□□□□ -2.18
NIC96YFR002W YMR253CQ04835 414 aa1.41□□□□□ -2.18
NIC96YFR002W RDS3Q06835 107 aaPredicted RBP1.41□□□□□ -2.18
NIC96YFR002W MDN1Q12019 4910 aaKnown RBP1.41□□□□□ -2.18
NIC96YFR002W YHL037CP38733 133 aa1.41□□□□□ -2.18
NIC96YFR002W YEL028WP39989 153 aa1.41□□□□□ -2.18
NIC96YFR002W TIR3P40552 269 aa1.41□□□□□ -2.18
NIC96YFR002W YGR219WP53307 113 aa1.41□□□□□ -2.18
NIC96YFR002W RGM1Q00453 211 aa1.41□□□□□ -2.18
NIC96YFR002W YMR295CQ03559 197 aa1.41□□□□□ -2.18
NIC96YFR002W MRPS8Q03799 155 aa1.41□□□□□ -2.18
NIC96YFR002W YDR102CQ03864 110 aa1.41□□□□□ -2.18
NIC96YFR002W SYM1Q06563 197 aa1.41□□□□□ -2.18
NIC96YFR002W YGL193CP53097 103 aa1.4□□□□□ -2.18
NIC96YFR002W TIM13P53299 105 aa1.4□□□□□ -2.18
NIC96YFR002W YNL033WP53964 284 aa1.4□□□□□ -2.18
NIC96YFR002W IRC23Q08416 157 aa1.4□□□□□ -2.18
NIC96YFR002W PHO13P19881 312 aa1.4□□□□□ -2.19
NIC96YFR002W HSP30P25619 332 aa1.4□□□□□ -2.19
NIC96YFR002W VMA22P38784 181 aa1.4□□□□□ -2.19
NIC96YFR002W APS3P47064 194 aa1.4□□□□□ -2.19
Retrieved 100 of 5,963 RNA–protein pairs in 17.1 ms