RNA–Protein interactions for RNA: YER029C

SMB1, Transcript of Core Sm protein Sm B, yeastyeast

Gene SMB1, Length 591 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SMB1YER029C RPC19P28000 142 aaKnown RBP0.54□□□□□ -2.32
SMB1YER029C HSP150P32478 413 aa0.54□□□□□ -2.32
SMB1YER029C HTD2P38790 280 aaKnown RBP0.54□□□□□ -2.32
SMB1YER029C IPI1P38803 334 aaPredicted RBP0.54□□□□□ -2.32
SMB1YER029C YEL014CP39999 101 aa0.54□□□□□ -2.32
SMB1YER029C CIN5P40917 295 aa0.54□□□□□ -2.32
SMB1YER029C TMA23Q03525 211 aa0.54□□□□□ -2.32
SMB1YER029C YDR102CQ03864 110 aa0.54□□□□□ -2.32
SMB1YER029C PKR1Q03880 122 aaKnown RBP0.54□□□□□ -2.32
SMB1YER029C YPD1Q07688 167 aa0.54□□□□□ -2.32
SMB1YER029C HSL1P34244 1518 aa0.54□□□□□ -2.32
SMB1YER029C PBI2P0CT04 75 aaKnown RBP0.53□□□□□ -2.32
SMB1YER029C RPL30P14120 105 aaKnown RBP0.53□□□□□ -2.32
SMB1YER029C YCR001WP25347 104 aa0.53□□□□□ -2.32
SMB1YER029C BUB2P26448 306 aaPredicted RBP0.53□□□□□ -2.32
SMB1YER029C POP7P38291 140 aa0.53□□□□□ -2.32
SMB1YER029C YER181CP40097 107 aa0.53□□□□□ -2.32
SMB1YER029C DLS1P40366 167 aa0.53□□□□□ -2.32
SMB1YER029C APQ12P40532 138 aa0.53□□□□□ -2.32
SMB1YER029C RBL2P48606 106 aaKnown RBP0.53□□□□□ -2.32
SMB1YER029C YGL193CP53097 103 aa0.53□□□□□ -2.32
SMB1YER029C YDR476CQ03362 224 aa0.53□□□□□ -2.32
SMB1YER029C VAM10Q08474 114 aa0.53□□□□□ -2.32
SMB1YER029C YPR202WQ08993 238 aa0.53□□□□□ -2.32
SMB1YER029C PET54P10834 293 aa0.52□□□□□ -2.33
SMB1YER029C PHO13P19881 312 aa0.52□□□□□ -2.33
SMB1YER029C MRS4P23500 304 aa0.52□□□□□ -2.33
SMB1YER029C PEX34P25584 144 aa0.52□□□□□ -2.33
SMB1YER029C YBR027CP38220 110 aa0.52□□□□□ -2.33
SMB1YER029C GIM4P40005 111 aaKnown RBP0.52□□□□□ -2.33
SMB1YER029C PHB1P40961 287 aa0.52□□□□□ -2.33
SMB1YER029C FIP1P45976 327 aa0.52□□□□□ -2.33
SMB1YER029C APS3P47064 194 aa0.52□□□□□ -2.33
SMB1YER029C YGR042WP53227 271 aa0.52□□□□□ -2.33
SMB1YER029C RAV2Q03956 351 aa0.52□□□□□ -2.33
SMB1YER029C CSN9Q03981 162 aa0.52□□□□□ -2.33
SMB1YER029C SPC2Q04969 178 aa0.52□□□□□ -2.33
SMB1YER029C ATP14Q12349 124 aa0.52□□□□□ -2.33
SMB1YER029C RPS28BP0C0X0 67 aaKnown RBP0.51□□□□□ -2.33
SMB1YER029C SUA7P29055 345 aaPredicted RBP0.51□□□□□ -2.33
SMB1YER029C SUI1P32911 108 aaKnown RBP0.51□□□□□ -2.33
SMB1YER029C YAP3P38749 330 aa0.51□□□□□ -2.33
SMB1YER029C CYC2P38909 366 aa0.51□□□□□ -2.33
SMB1YER029C IPT1P38954 527 aa0.51□□□□□ -2.33
SMB1YER029C GLC8P41818 229 aa0.51□□□□□ -2.33
SMB1YER029C YGR201CP42936 225 aa0.51□□□□□ -2.33
SMB1YER029C YGL204CP53089 101 aa0.51□□□□□ -2.33
SMB1YER029C YGR039WP53225 103 aa0.51□□□□□ -2.33
SMB1YER029C DYN2Q02647 92 aa0.51□□□□□ -2.33
SMB1YER029C COF1Q03048 143 aaKnown RBP0.51□□□□□ -2.33
SMB1YER029C FMN1Q03778 218 aa0.51□□□□□ -2.33
SMB1YER029C YMR320WQ04897 101 aa0.51□□□□□ -2.33
SMB1YER029C RPS28AQ3E7X9 67 aaPredicted RBP0.51□□□□□ -2.33
SMB1YER029C URA2P07259 2214 aaKnown RBP0.5□□□□□ -2.33
SMB1YER029C MYO2P19524 1574 aaKnown RBP0.5□□□□□ -2.33
SMB1YER029C ECM5Q03214 1411 aa0.5□□□□□ -2.33
SMB1YER029C DDR48P18899 430 aaKnown RBP0.5□□□□□ -2.33
SMB1YER029C HSP12P22943 109 aaKnown RBP0.5□□□□□ -2.33
SMB1YER029C SRP21P32342 167 aa0.5□□□□□ -2.33
SMB1YER029C MRP49P32388 137 aa0.5□□□□□ -2.33
SMB1YER029C HYM1P32464 399 aa0.5□□□□□ -2.33
SMB1YER029C RPL14AP36105 138 aaKnown RBP0.5□□□□□ -2.33
SMB1YER029C MRPL24P36525 258 aaPredicted RBP0.5□□□□□ -2.33
SMB1YER029C ECM31P38122 312 aa0.5□□□□□ -2.33
SMB1YER029C PRS3P38689 320 aaKnown RBP0.5□□□□□ -2.33
SMB1YER029C RPL14BP38754 138 aaKnown RBP0.5□□□□□ -2.33
SMB1YER029C YJL218WP40892 196 aaKnown RBP0.5□□□□□ -2.33
SMB1YER029C YGR017WP53210 297 aa0.5□□□□□ -2.33
SMB1YER029C HHO1P53551 258 aa0.5□□□□□ -2.33
SMB1YER029C ATP19P81451 68 aa0.5□□□□□ -2.33
SMB1YER029C YDR366CP87287 132 aa0.5□□□□□ -2.33
SMB1YER029C NMA1Q06178 401 aaKnown RBP0.5□□□□□ -2.33
SMB1YER029C SCS22Q6Q595 175 aa0.5□□□□□ -2.33
SMB1YER029C MDS3P53094 1487 aa0.49□□□□□ -2.33
SMB1YER029C RPO41P13433 1351 aaKnown RBP0.49□□□□□ -2.33
SMB1YER029C YGL041W-AP0C5N3 154 aa0.49□□□□□ -2.33
SMB1YER029C GPI2P46961 280 aa0.49□□□□□ -2.33
SMB1YER029C VMA10P48836 114 aaKnown RBP0.49□□□□□ -2.33
SMB1YER029C RCF2P53721 224 aa0.49□□□□□ -2.33
SMB1YER029C YNL122CP53921 115 aaPredicted RBP0.49□□□□□ -2.33
SMB1YER029C YNL019CP53975 284 aa0.49□□□□□ -2.33
SMB1YER029C TIM8P57744 87 aa0.49□□□□□ -2.33
SMB1YER029C ELC1Q03071 99 aa0.49□□□□□ -2.33
SMB1YER029C EST3Q03096 181 aa0.49□□□□□ -2.33
SMB1YER029C CNL1Q06333 122 aa0.49□□□□□ -2.33
SMB1YER029C RRT7Q07829 113 aa0.49□□□□□ -2.33
SMB1YER029C RFU1Q08003 200 aa0.49□□□□□ -2.33
SMB1YER029C SPC3Q12133 184 aa0.49□□□□□ -2.33
SMB1YER029C WIP1Q2V2P8 89 aa0.49□□□□□ -2.33
SMB1YER029C YLR361C-AQ3E795 98 aa0.49□□□□□ -2.33
SMB1YER029C RAD50P12753 1312 aa0.48□□□□□ -2.33
SMB1YER029C ADK1P07170 222 aaKnown RBP0.48□□□□□ -2.33
SMB1YER029C NHP6AP11632 93 aaKnown RBP0.48□□□□□ -2.33
SMB1YER029C HYP2P23301 157 aaKnown RBP0.48□□□□□ -2.33
SMB1YER029C TRS20P38334 175 aa0.48□□□□□ -2.33
SMB1YER029C HHY1P39982 102 aa0.48□□□□□ -2.33
SMB1YER029C HPM1P40481 377 aa0.48□□□□□ -2.33
SMB1YER029C LSM8P47093 109 aaKnown RBP0.48□□□□□ -2.33
SMB1YER029C EMC4P53073 190 aa0.48□□□□□ -2.33
SMB1YER029C SDH7Q04401 133 aa0.48□□□□□ -2.33
Retrieved 100 of 5,963 RNA–protein pairs in 54.4 ms