RNA–Protein interactions for RNA: YDR486C

VPS60, Transcript of Protein involved in late endosome to vacuole transport, yeastyeast

Gene VPS60, Length 690 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS60YDR486C PHD1P36093 366 aa8.4□□□□□ -1.06
VPS60YDR486C MRPL4P36517 319 aa8.4□□□□□ -1.06
VPS60YDR486C YHR173CP38864 112 aa8.4□□□□□ -1.06
VPS60YDR486C YIL077CP40508 320 aa8.4□□□□□ -1.06
VPS60YDR486C YPI1P43587 155 aa8.4□□□□□ -1.06
VPS60YDR486C HIT1P46973 164 aa8.4□□□□□ -1.06
VPS60YDR486C MRPS9P38120 278 aa8.39□□□□□ -1.07
VPS60YDR486C ATG8P38182 117 aaRIP-Chip data8.39□□□□□ -1.07not detected
VPS60YDR486C HUA1P40325 198 aa8.39□□□□□ -1.07
VPS60YDR486C VMA21P41806 77 aa8.39□□□□□ -1.07
VPS60YDR486C AIM24P47127 394 aa8.39□□□□□ -1.07
VPS60YDR486C TOM7P53507 60 aa8.39□□□□□ -1.07
VPS60YDR486C RAV2Q03956 351 aa8.39□□□□□ -1.07
VPS60YDR486C PRM3Q08931 133 aa8.39□□□□□ -1.07
VPS60YDR486C UTP20P35194 2493 aaKnown RBP8.38□□□□□ -1.07
VPS60YDR486C ERS1P17261 260 aa8.38□□□□□ -1.07
VPS60YDR486C PGD1P40356 397 aa8.38□□□□□ -1.07
VPS60YDR486C RPA43P46669 326 aa8.38□□□□□ -1.07
VPS60YDR486C HHO1P53551 258 aa8.38□□□□□ -1.07
VPS60YDR486C UBC7Q02159 165 aa8.38□□□□□ -1.07
VPS60YDR486C YML108WQ03759 105 aa8.38□□□□□ -1.07
VPS60YDR486C LRS4Q04087 347 aaKnown RBP8.38□□□□□ -1.07
VPS60YDR486C ATX2Q12067 313 aa8.38□□□□□ -1.07
VPS60YDR486C YPR013CQ12145 317 aa8.38□□□□□ -1.07
VPS60YDR486C COX2P00410 251 aa8.37□□□□□ -1.07
VPS60YDR486C MRS1P07266 363 aa8.37□□□□□ -1.07
VPS60YDR486C SNF11P38956 169 aa8.37□□□□□ -1.07
VPS60YDR486C GPI2P46961 280 aa8.37□□□□□ -1.07
VPS60YDR486C DAD3P69850 94 aa8.37□□□□□ -1.07
VPS60YDR486C YGR035W-AQ45U48 73 aa8.37□□□□□ -1.07
VPS60YDR486C YLR302CO13544 120 aa8.36□□□□□ -1.07
VPS60YDR486C CAX4P53223 239 aa8.36□□□□□ -1.07
VPS60YDR486C ATG39Q06159 398 aa8.36□□□□□ -1.07
VPS60YDR486C NAT3Q06504 195 aa8.36□□□□□ -1.07
VPS60YDR486C YLR118CQ12354 227 aa8.36□□□□□ -1.07
VPS60YDR486C YKL102CP34249 101 aa8.35□□□□□ -1.07
VPS60YDR486C YBR090CP38253 122 aa8.35□□□□□ -1.07
VPS60YDR486C AGE2P40529 298 aa8.35□□□□□ -1.07
VPS60YDR486C LCB3P47013 409 aa8.35□□□□□ -1.07
VPS60YDR486C DAN1P47178 298 aa8.35□□□□□ -1.07
VPS60YDR486C IZH1Q03419 316 aa8.35□□□□□ -1.07
VPS60YDR486C YOL160WQ08321 113 aa8.35□□□□□ -1.07
VPS60YDR486C FMP49A0A023PZB3 126 aa8.34□□□□□ -1.07
VPS60YDR486C YHR212W-AP0CX91 67 aa8.34□□□□□ -1.07
VPS60YDR486C CMC1P36064 111 aa8.34□□□□□ -1.07
VPS60YDR486C MBB1P39534 108 aa8.34□□□□□ -1.07
VPS60YDR486C YGR025WP53216 100 aa8.34□□□□□ -1.07
VPS60YDR486C STP4Q07351 490 aa8.34□□□□□ -1.07
VPS60YDR486C RPB3P16370 318 aaKnown RBP8.33□□□□□ -1.08
VPS60YDR486C SRP21P32342 167 aa8.33□□□□□ -1.08
VPS60YDR486C SDH4P37298 181 aa8.33□□□□□ -1.08
VPS60YDR486C HSP10P38910 106 aa8.33□□□□□ -1.08
VPS60YDR486C PAU15P40585 124 aa8.33□□□□□ -1.08
VPS60YDR486C HTB2P02294 131 aa8.32□□□□□ -1.08
VPS60YDR486C SRP14P38985 146 aa8.32□□□□□ -1.08
VPS60YDR486C MST28P39552 234 aa8.32□□□□□ -1.08
VPS60YDR486C NSE4P43124 402 aa8.32□□□□□ -1.08
VPS60YDR486C MGA1P53050 456 aa8.32□□□□□ -1.08
VPS60YDR486C MST27P53176 234 aa8.32□□□□□ -1.08
VPS60YDR486C SMT3Q12306 101 aaKnown RBP8.32□□□□□ -1.08
VPS60YDR486C MRPL49P40858 161 aaPredicted RBP8.31□□□□□ -1.08
VPS60YDR486C MOG1P47123 218 aa8.31□□□□□ -1.08
VPS60YDR486C ATP19P81451 68 aa8.31□□□□□ -1.08
VPS60YDR486C ZEO1Q08245 113 aa8.31□□□□□ -1.08
VPS60YDR486C DCN1Q12395 269 aa8.31□□□□□ -1.08
VPS60YDR486C NHP6AP11632 93 aaKnown RBP8.3□□□□□ -1.08
VPS60YDR486C POF1P25576 258 aa8.3□□□□□ -1.08
VPS60YDR486C YMR141CP40211 102 aa8.3□□□□□ -1.08
VPS60YDR486C YOP1Q12402 180 aa8.3□□□□□ -1.08
VPS60YDR486C MRPL20P22354 195 aaPredicted RBP8.29□□□□□ -1.08
VPS60YDR486C YPT10P38146 199 aa8.29□□□□□ -1.08
VPS60YDR486C COX18P53239 316 aa8.29□□□□□ -1.08
VPS60YDR486C SNU23Q12368 194 aaPredicted RBP8.29□□□□□ -1.08
VPS60YDR486C TAR1Q8TGM6 124 aa8.29□□□□□ -1.08
VPS60YDR486C RPL31BP0C2H9 113 aaKnown RBP8.28□□□□□ -1.08
VPS60YDR486C PRE9P23638 258 aaKnown RBP8.28□□□□□ -1.08
VPS60YDR486C UTR5P32630 166 aa8.28□□□□□ -1.08
VPS60YDR486C AME1P38313 324 aa8.28□□□□□ -1.08
VPS60YDR486C APS2Q00381 147 aa8.28□□□□□ -1.08
VPS60YDR486C RRG8Q06109 277 aa8.28□□□□□ -1.08
VPS60YDR486C IZH3Q07959 543 aa8.28□□□□□ -1.08
VPS60YDR486C GEP3Q08622 556 aa8.28□□□□□ -1.08
VPS60YDR486C YOR011W-AQ3E807 68 aa8.28□□□□□ -1.08
VPS60YDR486C YGL010WP25338 174 aa8.27□□□□□ -1.09
VPS60YDR486C YBR013CP38215 129 aa8.27□□□□□ -1.09
VPS60YDR486C SIM1P40472 476 aa8.27□□□□□ -1.09
VPS60YDR486C GTT1P40582 234 aa8.27□□□□□ -1.09
VPS60YDR486C FYV6P53913 173 aa8.27□□□□□ -1.09
VPS60YDR486C DAD4P69851 72 aa8.27□□□□□ -1.09
VPS60YDR486C PRM7Q12459 698 aa8.27□□□□□ -1.09
VPS60YDR486C YCL001W-BQ96VH2 84 aa8.27□□□□□ -1.09
VPS60YDR486C TIR1P10863 254 aa8.26□□□□□ -1.09
VPS60YDR486C MSN1P22148 382 aa8.26□□□□□ -1.09
VPS60YDR486C QRI5P32344 111 aa8.26□□□□□ -1.09
VPS60YDR486C FZF1P32805 299 aa8.26□□□□□ -1.09
VPS60YDR486C YBR144CP34215 104 aa8.26□□□□□ -1.09
VPS60YDR486C PRE5P40302 234 aaKnown RBP8.26□□□□□ -1.09
VPS60YDR486C TDA4P47153 279 aa8.26□□□□□ -1.09
VPS60YDR486C YIP3P53633 176 aa8.26□□□□□ -1.09
VPS60YDR486C YOR105WQ08504 108 aa8.26□□□□□ -1.09
Retrieved 100 of 5,963 RNA–protein pairs in 65.2 ms