RNA–Protein interactions for RNA: YDR138W

HPR1, Transcript of Subunit of THO/TREX complexes, yeastyeast

Gene HPR1, Length 2,259 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HPR1YDR138W DNA2P38859 1522 aa3.15□□□□□ -1.9
HPR1YDR138W YPR170W-BP0C5R9 85 aa3.15□□□□□ -1.91
HPR1YDR138W SPO13P23624 291 aa3.15□□□□□ -1.91
HPR1YDR138W MSA2P36157 363 aa3.15□□□□□ -1.91
HPR1YDR138W SDH4P37298 181 aa3.15□□□□□ -1.91
HPR1YDR138W NSG1P38837 291 aa3.15□□□□□ -1.91
HPR1YDR138W SPL2P38839 148 aa3.15□□□□□ -1.91
HPR1YDR138W PAM16P42949 149 aa3.15□□□□□ -1.91
HPR1YDR138W PIN3Q06449 215 aa3.15□□□□□ -1.91
HPR1YDR138W YPL162CQ12042 273 aa3.15□□□□□ -1.91
HPR1YDR138W YIL134C-AQ45U18 67 aa3.15□□□□□ -1.91
HPR1YDR138W NTE1Q04958 1679 aa3.15□□□□□ -1.91
HPR1YDR138W SNF4P12904 322 aa3.14□□□□□ -1.91
HPR1YDR138W RPB3P16370 318 aaKnown RBP3.14□□□□□ -1.91
HPR1YDR138W MED6P38782 295 aa3.14□□□□□ -1.91
HPR1YDR138W YHR140WP38842 239 aa3.14□□□□□ -1.91
HPR1YDR138W TTI2P47168 421 aa3.14□□□□□ -1.91
HPR1YDR138W BAT2P47176 376 aaKnown RBP3.14□□□□□ -1.91
HPR1YDR138W TMC1Q08422 150 aaPredicted RBP3.14□□□□□ -1.91
HPR1YDR138W DGA1Q08650 418 aa3.14□□□□□ -1.91
HPR1YDR138W YDR029WQ12111 104 aa3.14□□□□□ -1.91
HPR1YDR138W YDL211CQ12121 372 aa3.14□□□□□ -1.91
HPR1YDR138W RKR1Q04781 1562 aa3.14□□□□□ -1.91
HPR1YDR138W ADH3P07246 375 aaKnown RBP3.14□□□□□ -1.91
HPR1YDR138W CLB6P32943 380 aa3.14□□□□□ -1.91
HPR1YDR138W APS1P35181 156 aa3.14□□□□□ -1.91
HPR1YDR138W YAR029WP39549 74 aa3.14□□□□□ -1.91
HPR1YDR138W IRC22P40006 225 aa3.14□□□□□ -1.91
HPR1YDR138W SMX2P40204 77 aaKnown RBP3.14□□□□□ -1.91
HPR1YDR138W YFL065CP43539 102 aa3.14□□□□□ -1.91
HPR1YDR138W RCE1Q03530 315 aa3.14□□□□□ -1.91
HPR1YDR138W YMR103CQ04436 120 aa3.14□□□□□ -1.91
HPR1YDR138W YOL131WQ08270 108 aa3.14□□□□□ -1.91
HPR1YDR138W YPR203WQ08994 102 aa3.14□□□□□ -1.91
HPR1YDR138W COA6Q3E846 104 aa3.14□□□□□ -1.91
HPR1YDR138W CHC1P22137 1653 aaKnown RBP3.14□□□□□ -1.91
HPR1YDR138W POL1P13382 1468 aa3.13□□□□□ -1.91
HPR1YDR138W PAN1P32521 1480 aa3.13□□□□□ -1.91
HPR1YDR138W CCS1P40202 249 aaKnown RBP3.13□□□□□ -1.91
HPR1YDR138W ARP3P47117 449 aaKnown RBP3.13□□□□□ -1.91
HPR1YDR138W LSM7P53905 115 aaKnown RBP3.13□□□□□ -1.91
HPR1YDR138W CUE4Q04201 117 aaPredicted RBP3.13□□□□□ -1.91
HPR1YDR138W USO1P25386 1790 aa3.13□□□□□ -1.91
HPR1YDR138W SNQ2P32568 1501 aaKnown RBP3.13□□□□□ -1.91
HPR1YDR138W SRP21P32342 167 aa3.13□□□□□ -1.91
HPR1YDR138W TMA19P35691 167 aaKnown RBP3.13□□□□□ -1.91
HPR1YDR138W MRPL11P36521 249 aaPredicted RBP3.13□□□□□ -1.91
HPR1YDR138W CSH1P38287 376 aa3.13□□□□□ -1.91
HPR1YDR138W KEI1Q06346 221 aa3.13□□□□□ -1.91
HPR1YDR138W HRT1Q08273 121 aa3.13□□□□□ -1.91
HPR1YDR138W NIP7Q08962 181 aaKnown RBP3.13□□□□□ -1.91
HPR1YDR138W YDL180WQ12301 547 aa3.13□□□□□ -1.91
HPR1YDR138W MPD1Q12404 318 aaKnown RBP3.13□□□□□ -1.91
HPR1YDR138W PDR5P33302 1511 aaKnown RBP3.13□□□□□ -1.91
HPR1YDR138W YRA2P36036 203 aaKnown RBP RIP-Chip data3.12□□□□□ -1.91not detected
HPR1YDR138W FIP1P45976 327 aa3.12□□□□□ -1.91
HPR1YDR138W THG1P53215 237 aaKnown RBP3.12□□□□□ -1.91
HPR1YDR138W CAX4P53223 239 aa3.12□□□□□ -1.91
HPR1YDR138W RSM10Q03201 203 aa3.12□□□□□ -1.91
HPR1YDR138W GAS3Q03655 524 aa3.12□□□□□ -1.91
HPR1YDR138W YRF1-3P0CX14 1859 aa3.12□□□□□ -1.91
HPR1YDR138W YRF1-7P0CX15 1859 aa3.12□□□□□ -1.91
HPR1YDR138W YRF1-6P53819 1859 aa3.12□□□□□ -1.91
HPR1YDR138W MSW1P04803 379 aa3.12□□□□□ -1.91
HPR1YDR138W MIG1P27705 504 aa3.12□□□□□ -1.91
HPR1YDR138W CUP9P41817 306 aa3.12□□□□□ -1.91
HPR1YDR138W GEP7P53171 287 aa3.12□□□□□ -1.91
HPR1YDR138W YGR050CP53231 118 aa3.12□□□□□ -1.91
HPR1YDR138W PGA1P53896 198 aa3.12□□□□□ -1.91
HPR1YDR138W SMD1Q02260 146 aaPredicted RBP3.12□□□□□ -1.91
HPR1YDR138W TVP15Q03860 143 aa3.12□□□□□ -1.91
HPR1YDR138W FIT3Q08907 204 aa3.12□□□□□ -1.91
HPR1YDR138W YPL264CQ08980 353 aa3.12□□□□□ -1.91
HPR1YDR138W YOR097CQ12274 175 aaPredicted RBP3.12□□□□□ -1.91
HPR1YDR138W VMA11P32842 164 aa3.11□□□□□ -1.91
HPR1YDR138W CWP2P43497 92 aa3.11□□□□□ -1.91
HPR1YDR138W GPI2P46961 280 aa3.11□□□□□ -1.91
HPR1YDR138W EAF6P47128 113 aa3.11□□□□□ -1.91
HPR1YDR138W BUD25P85052 153 aa3.11□□□□□ -1.91
HPR1YDR138W NAT5Q08689 176 aa3.11□□□□□ -1.91
HPR1YDR138W SMT3Q12306 101 aaKnown RBP3.11□□□□□ -1.91
HPR1YDR138W YNR034W-AQ3E841 98 aa3.11□□□□□ -1.91
HPR1YDR138W GCN2P15442 1659 aa3.11□□□□□ -1.91
HPR1YDR138W YRF1-2P40105 1681 aa3.11□□□□□ -1.91
HPR1YDR138W BPT1P14772 1559 aa3.11□□□□□ -1.91
HPR1YDR138W CPA1P07258 411 aaKnown RBP3.1□□□□□ -1.91
HPR1YDR138W YER134CP40081 178 aa3.1□□□□□ -1.91
HPR1YDR138W YER181CP40097 107 aa3.1□□□□□ -1.91
HPR1YDR138W YPR174CQ06616 221 aaPredicted RBP3.1□□□□□ -1.91
HPR1YDR138W TSC3Q3E790 80 aa3.1□□□□□ -1.91
HPR1YDR138W ECM12O13529 151 aa3.1□□□□□ -1.91
HPR1YDR138W ATG8P38182 117 aaRIP-Chip data3.1□□□□□ -1.91not detected
HPR1YDR138W SWM2P40342 146 aa3.1□□□□□ -1.91
HPR1YDR138W YIL054WP40524 105 aa3.1□□□□□ -1.91
HPR1YDR138W YMR082CQ04276 118 aa3.1□□□□□ -1.91
HPR1YDR138W YMR252CQ04814 134 aa3.1□□□□□ -1.91
HPR1YDR138W SPO14P36126 1683 aa3.1□□□□□ -1.91
HPR1YDR138W SPO73P40031 143 aa3.09□□□□□ -1.91
HPR1YDR138W MPM1P40364 252 aa3.09□□□□□ -1.91
HPR1YDR138W ALG9P53868 555 aaKnown RBP3.09□□□□□ -1.91
Retrieved 100 of 5,963 RNA–protein pairs in 23.8 ms