RNA–Protein interactions for RNA: YDR120C

TRM1, Transcript of tRNA methyltransferase, yeastyeast

Gene TRM1, Length 1,713 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRM1YDR120C DOG2P38773 246 aa2.54□□□□□ -2
TRM1YDR120C DOG1P38774 246 aa2.54□□□□□ -2
TRM1YDR120C DLS1P40366 167 aa2.54□□□□□ -2
TRM1YDR120C YMD8Q03697 442 aa2.54□□□□□ -2
TRM1YDR120C RPL9AP05738 191 aaKnown RBP2.54□□□□□ -2
TRM1YDR120C YGL041W-AP0C5N3 154 aa2.54□□□□□ -2
TRM1YDR120C FBA1P14540 359 aaKnown RBP2.54□□□□□ -2
TRM1YDR120C OAC1P32332 324 aa2.54□□□□□ -2
TRM1YDR120C ECM4P36156 370 aa2.54□□□□□ -2
TRM1YDR120C YBR242WP38331 238 aa2.54□□□□□ -2
TRM1YDR120C CCC1P47818 322 aa2.54□□□□□ -2
TRM1YDR120C RPL9BP51401 191 aaKnown RBP2.54□□□□□ -2
TRM1YDR120C VPS71Q03433 280 aa2.54□□□□□ -2
TRM1YDR120C YOR283WQ12040 230 aaKnown RBP2.54□□□□□ -2
TRM1YDR120C PST2Q12335 198 aaKnown RBP2.54□□□□□ -2
TRM1YDR120C RPL25P04456 142 aaKnown RBP2.53□□□□□ -2
TRM1YDR120C IRC18P47056 224 aa2.53□□□□□ -2
TRM1YDR120C YPR170W-BP0C5R9 85 aa2.52□□□□□ -2.01
TRM1YDR120C SEN2P16658 377 aa2.52□□□□□ -2.01
TRM1YDR120C FCY21P40039 528 aa2.52□□□□□ -2.01
TRM1YDR120C ERJ5P43613 295 aaPredicted RBP2.52□□□□□ -2.01
TRM1YDR120C TTI2P47168 421 aa2.52□□□□□ -2.01
TRM1YDR120C DAN1P47178 298 aa2.52□□□□□ -2.01
TRM1YDR120C LPP1Q04396 274 aa2.52□□□□□ -2.01
TRM1YDR120C REP2P03872 296 aa2.51□□□□□ -2.01
TRM1YDR120C BUD23P25627 275 aaPredicted RBP2.51□□□□□ -2.01
TRM1YDR120C APS1P35181 156 aa2.51□□□□□ -2.01
TRM1YDR120C ECM31P38122 312 aa2.51□□□□□ -2.01
TRM1YDR120C PDR17P53844 350 aa2.51□□□□□ -2.01
TRM1YDR120C COG5P53951 403 aa2.51□□□□□ -2.01
TRM1YDR120C UPS1Q05776 175 aa2.51□□□□□ -2.01
TRM1YDR120C ADK1P07170 222 aaKnown RBP2.51□□□□□ -2.01
TRM1YDR120C IDP1P21954 428 aaKnown RBP2.51□□□□□ -2.01
TRM1YDR120C CPR5P35176 225 aa2.51□□□□□ -2.01
TRM1YDR120C FIP1P45976 327 aa2.51□□□□□ -2.01
TRM1YDR120C RBL2P48606 106 aaKnown RBP2.51□□□□□ -2.01
TRM1YDR120C CGR1P53188 120 aa2.51□□□□□ -2.01
TRM1YDR120C ATO3Q12359 275 aa2.51□□□□□ -2.01
TRM1YDR120C MPD1Q12404 318 aaKnown RBP2.51□□□□□ -2.01
TRM1YDR120C HUT1Q12520 339 aa2.51□□□□□ -2.01
TRM1YDR120C ATG40Q99325 256 aa2.51□□□□□ -2.01
TRM1YDR120C GCN3P14741 305 aa2.5□□□□□ -2.01
TRM1YDR120C ATG22P25568 528 aa2.5□□□□□ -2.01
TRM1YDR120C IKI1P38874 309 aa2.5□□□□□ -2.01
TRM1YDR120C YER137CP40083 148 aaKnown RBP2.5□□□□□ -2.01
TRM1YDR120C PLP1Q04004 230 aa2.5□□□□□ -2.01
TRM1YDR120C RRP17Q04031 235 aaPredicted RBP2.5□□□□□ -2.01
TRM1YDR120C NEJ1Q06148 342 aa2.5□□□□□ -2.01
TRM1YDR120C FCY1Q12178 158 aa2.5□□□□□ -2.01
TRM1YDR120C RFA3P26755 122 aaKnown RBP2.49□□□□□ -2.01
TRM1YDR120C YRB2P40517 327 aa2.49□□□□□ -2.01
TRM1YDR120C YJL027CP47063 138 aaPredicted RBP2.49□□□□□ -2.01
TRM1YDR120C DAD3P69850 94 aa2.49□□□□□ -2.01
TRM1YDR120C YMR099CQ03161 297 aaKnown RBP2.49□□□□□ -2.01
TRM1YDR120C YLR031WQ07978 186 aa2.49□□□□□ -2.01
TRM1YDR120C SEC4P07560 215 aaKnown RBP2.48□□□□□ -2.01
TRM1YDR120C YHR212W-AP0CX91 67 aa2.48□□□□□ -2.01
TRM1YDR120C YCR101CP25607 182 aa2.48□□□□□ -2.01
TRM1YDR120C YBL010CP32788 280 aa2.48□□□□□ -2.01
TRM1YDR120C SNC2P33328 115 aa2.48□□□□□ -2.01
TRM1YDR120C UTP11P34247 250 aaPredicted RBP2.48□□□□□ -2.01
TRM1YDR120C YRA2P36036 203 aaKnown RBP RIP-Chip data2.48□□□□□ -2.01not detected
TRM1YDR120C GNA1P43577 159 aaPredicted RBP2.48□□□□□ -2.01
TRM1YDR120C VPS55P47111 140 aa2.48□□□□□ -2.01
TRM1YDR120C VMA10P48836 114 aaKnown RBP2.48□□□□□ -2.01
TRM1YDR120C YGR219WP53307 113 aa2.48□□□□□ -2.01
TRM1YDR120C PAU12P53343 120 aa2.48□□□□□ -2.01
TRM1YDR120C HSK3P69852 69 aa2.48□□□□□ -2.01
TRM1YDR120C TMA20P89886 181 aaPredicted RBP2.48□□□□□ -2.01
TRM1YDR120C MRPS8Q03799 155 aa2.48□□□□□ -2.01
TRM1YDR120C HOR7Q05827 59 aa2.48□□□□□ -2.01
TRM1YDR120C TDA8Q6B2U8 126 aa2.48□□□□□ -2.01
TRM1YDR120C HTB1P02293 131 aaKnown RBP2.48□□□□□ -2.01
TRM1YDR120C HTB2P02294 131 aa2.48□□□□□ -2.01
TRM1YDR120C MRPS17Q03246 237 aaPredicted RBP2.48□□□□□ -2.01
TRM1YDR120C NOC4Q06512 552 aaPredicted RBP2.48□□□□□ -2.01
TRM1YDR120C COX9P07255 59 aa2.47□□□□□ -2.01
TRM1YDR120C PEX4P29340 183 aa2.47□□□□□ -2.01
TRM1YDR120C NRG2P38082 220 aa2.47□□□□□ -2.01
TRM1YDR120C PAU24P38155 120 aa2.47□□□□□ -2.01
TRM1YDR120C UMP1P38293 148 aa2.47□□□□□ -2.01
TRM1YDR120C YGL204CP53089 101 aa2.47□□□□□ -2.01
TRM1YDR120C GRX5Q02784 150 aa2.47□□□□□ -2.01
TRM1YDR120C YMR252CQ04814 134 aa2.47□□□□□ -2.01
TRM1YDR120C PRM3Q08931 133 aa2.47□□□□□ -2.01
TRM1YDR120C YLR156WP0CE96 114 aa2.46□□□□□ -2.02
TRM1YDR120C YLR159WP0CE97 114 aa2.46□□□□□ -2.02
TRM1YDR120C YLR161WP0CE98 114 aa2.46□□□□□ -2.02
TRM1YDR120C ARO7P32178 256 aa2.46□□□□□ -2.02
TRM1YDR120C SPS18P32572 300 aa2.46□□□□□ -2.02
TRM1YDR120C YBR285WP38354 144 aa2.46□□□□□ -2.02
TRM1YDR120C CCS1P40202 249 aaKnown RBP2.46□□□□□ -2.02
TRM1YDR120C FIT1Q04433 528 aa2.46□□□□□ -2.02
TRM1YDR120C NMA1Q06178 401 aaKnown RBP2.46□□□□□ -2.02
TRM1YDR120C YPD1Q07688 167 aa2.46□□□□□ -2.02
TRM1YDR120C STF2P16965 84 aa2.45□□□□□ -2.02
TRM1YDR120C SFK1P35735 353 aa2.45□□□□□ -2.02
TRM1YDR120C PDS1P40316 373 aaPredicted RBP2.45□□□□□ -2.02
TRM1YDR120C BMT5P40493 336 aa2.45□□□□□ -2.02
TRM1YDR120C MEU1Q07938 337 aaKnown RBP RIP-Chip data2.45□□□□□ -2.02not detected
Retrieved 100 of 5,963 RNA–protein pairs in 78.8 ms