RNA–Protein interactions for RNA: YDL196W

YDL196W, Transcript of Dubious open reading frame, yeast

Gene YDL196W, Length 330 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YDL196W	YDL196W	YDC1	Q02896	317 aa		0.47	□□□□□ -2.33
YDL196W	YDL196W	ELP6	Q04868	273 aa		0.47	□□□□□ -2.33
YDL196W	YDL196W	YPR114W	Q06107	315 aa		0.47	□□□□□ -2.33
YDL196W	YDL196W	KEI1	Q06346	221 aa		0.47	□□□□□ -2.33
YDL196W	YDL196W	RFU1	Q08003	200 aa		0.47	□□□□□ -2.33
YDL196W	YDL196W	YPR203W	Q08994	102 aa		0.47	□□□□□ -2.33
YDL196W	YDL196W	TAR1	Q8TGM6	124 aa		0.47	□□□□□ -2.33
YDL196W	YDL196W	YOR1	P53049	1477 aa		0.47	□□□□□ -2.33
YDL196W	YDL196W	KIN28	P06242	306 aa		0.46	□□□□□ -2.34
YDL196W	YDL196W	AQY2	P0CD90	149 aa		0.46	□□□□□ -2.34
YDL196W	YDL196W	PHO13	P19881	312 aa		0.46	□□□□□ -2.34
YDL196W	YDL196W	HSP12	P22943	109 aa	Known RBP	0.46	□□□□□ -2.34
YDL196W	YDL196W	SPT14	P32363	452 aa		0.46	□□□□□ -2.34
YDL196W	YDL196W	SHB17	P36136	271 aa	Known RBP	0.46	□□□□□ -2.34
YDL196W	YDL196W	SRL3	P36167	246 aa		0.46	□□□□□ -2.34
YDL196W	YDL196W	YHL037C	P38733	133 aa		0.46	□□□□□ -2.34
YDL196W	YDL196W	IPI1	P38803	334 aa	Predicted RBP	0.46	□□□□□ -2.34
YDL196W	YDL196W	YAR064W	P39563	99 aa		0.46	□□□□□ -2.34
YDL196W	YDL196W	YEL014C	P39999	101 aa		0.46	□□□□□ -2.34
YDL196W	YDL196W	GLC8	P41818	229 aa		0.46	□□□□□ -2.34
YDL196W	YDL196W	YFL051C	P43552	160 aa		0.46	□□□□□ -2.34
YDL196W	YDL196W	LSM1	P47017	172 aa	Known RBP	0.46	□□□□□ -2.34
YDL196W	YDL196W	RBL2	P48606	106 aa	Known RBP	0.46	□□□□□ -2.34
YDL196W	YDL196W	YGR039W	P53225	103 aa		0.46	□□□□□ -2.34
YDL196W	YDL196W	HHO1	P53551	258 aa		0.46	□□□□□ -2.34
YDL196W	YDL196W	FMN1	Q03778	218 aa		0.46	□□□□□ -2.34
YDL196W	YDL196W	SMD2	Q06217	110 aa	Known RBP	0.46	□□□□□ -2.34
YDL196W	YDL196W	IRC19	Q07843	230 aa		0.46	□□□□□ -2.34
YDL196W	YDL196W	SCS22	Q6Q595	175 aa		0.46	□□□□□ -2.34
YDL196W	YDL196W	HFA1	P32874	2273 aa		0.46	□□□□□ -2.34
YDL196W	YDL196W	FMP49	A0A023PZB3	126 aa		0.45	□□□□□ -2.34
YDL196W	YDL196W	MRS4	P23500	304 aa		0.45	□□□□□ -2.34
YDL196W	YDL196W	SRP21	P32342	167 aa		0.45	□□□□□ -2.34
YDL196W	YDL196W	MRPL24	P36525	258 aa	Predicted RBP	0.45	□□□□□ -2.34
YDL196W	YDL196W	YBR027C	P38220	110 aa		0.45	□□□□□ -2.34
YDL196W	YDL196W	HUA1	P40325	198 aa		0.45	□□□□□ -2.34
YDL196W	YDL196W	LSM8	P47093	109 aa	Known RBP	0.45	□□□□□ -2.34
YDL196W	YDL196W	DIE2	P50076	525 aa		0.45	□□□□□ -2.34
YDL196W	YDL196W	COF1	Q03048	143 aa	Known RBP	0.45	□□□□□ -2.34
YDL196W	YDL196W	EST3	Q03096	181 aa		0.45	□□□□□ -2.34
YDL196W	YDL196W	RAF1	Q06891	181 aa		0.45	□□□□□ -2.34
YDL196W	YDL196W	YDL241W	Q07738	123 aa		0.45	□□□□□ -2.34
YDL196W	YDL196W	YOR072W	Q08486	104 aa		0.45	□□□□□ -2.34
YDL196W	YDL196W	FCY1	Q12178	158 aa		0.45	□□□□□ -2.34
YDL196W	YDL196W	ATP14	Q12349	124 aa		0.45	□□□□□ -2.34
YDL196W	YDL196W	HUT1	Q12520	339 aa		0.45	□□□□□ -2.34
YDL196W	YDL196W	NHP6A	P11632	93 aa	Known RBP	0.44	□□□□□ -2.34
YDL196W	YDL196W	DDR48	P18899	430 aa	Known RBP	0.44	□□□□□ -2.34
YDL196W	YDL196W	MRPL44	P19956	98 aa		0.44	□□□□□ -2.34
YDL196W	YDL196W	UGX2	P32772	223 aa		0.44	□□□□□ -2.34
YDL196W	YDL196W	SUI1	P32911	108 aa	Known RBP	0.44	□□□□□ -2.34
YDL196W	YDL196W	YJL218W	P40892	196 aa	Known RBP	0.44	□□□□□ -2.34
YDL196W	YDL196W	RPL37A	P49166	88 aa	Known RBP	0.44	□□□□□ -2.34
YDL196W	YDL196W	MPC1	P53157	130 aa	Known RBP	0.44	□□□□□ -2.34
YDL196W	YDL196W	AVO2	Q04749	426 aa		0.44	□□□□□ -2.34
YDL196W	YDL196W	IRC21	Q04772	201 aa		0.44	□□□□□ -2.34
YDL196W	YDL196W	YPR153W	Q06537	140 aa		0.44	□□□□□ -2.34
YDL196W	YDL196W	GPI11	Q06636	219 aa		0.44	□□□□□ -2.34
YDL196W	YDL196W	LCL2	Q08045	131 aa		0.44	□□□□□ -2.34
YDL196W	YDL196W	NAT5	Q08689	176 aa		0.44	□□□□□ -2.34
YDL196W	YDL196W	CCW12	Q12127	133 aa		0.44	□□□□□ -2.34
YDL196W	YDL196W	RPL33A	P05744	107 aa	Known RBP	0.43	□□□□□ -2.34
YDL196W	YDL196W	FUN14	P18411	198 aa		0.43	□□□□□ -2.34
YDL196W	YDL196W	ANB1	P19211	157 aa		0.43	□□□□□ -2.34
YDL196W	YDL196W	HSP150	P32478	413 aa		0.43	□□□□□ -2.34
YDL196W	YDL196W	IPT1	P38954	527 aa		0.43	□□□□□ -2.34
YDL196W	YDL196W	GIM4	P40005	111 aa	Known RBP	0.43	□□□□□ -2.34
YDL196W	YDL196W	YJL009W	P47078	108 aa		0.43	□□□□□ -2.34
YDL196W	YDL196W	RPL37B	P51402	88 aa	Known RBP	0.43	□□□□□ -2.34
YDL196W	YDL196W	EMC4	P53073	190 aa		0.43	□□□□□ -2.34
YDL196W	YDL196W	YGR017W	P53210	297 aa		0.43	□□□□□ -2.34
YDL196W	YDL196W	YNL019C	P53975	284 aa		0.43	□□□□□ -2.34
YDL196W	YDL196W	YCL001W-A	P87012	153 aa		0.43	□□□□□ -2.34
YDL196W	YDL196W	SED1	Q01589	338 aa		0.43	□□□□□ -2.34
YDL196W	YDL196W	TMA23	Q03525	211 aa		0.43	□□□□□ -2.34
YDL196W	YDL196W	CSN9	Q03981	162 aa		0.43	□□□□□ -2.34
YDL196W	YDL196W	MHF1	Q3E835	90 aa		0.43	□□□□□ -2.34
YDL196W	YDL196W	KTI11	Q3E840	82 aa		0.43	□□□□□ -2.34
YDL196W	YDL196W	DDP1	Q99321	188 aa	Known RBP	0.43	□□□□□ -2.34
YDL196W	YDL196W	HAP2	P06774	265 aa		0.42	□□□□□ -2.34
YDL196W	YDL196W	PFY1	P07274	126 aa		0.42	□□□□□ -2.34
YDL196W	YDL196W	RPS22A	P0C0W1	130 aa	Known RBP	0.42	□□□□□ -2.34
YDL196W	YDL196W	HAP3	P13434	144 aa		0.42	□□□□□ -2.34
YDL196W	YDL196W	RPS1B	P23248	255 aa	Known RBP	0.42	□□□□□ -2.34
YDL196W	YDL196W	YCR001W	P25347	104 aa		0.42	□□□□□ -2.34
YDL196W	YDL196W	FYV5	P25585	152 aa		0.42	□□□□□ -2.34
YDL196W	YDL196W	SUA7	P29055	345 aa	Predicted RBP	0.42	□□□□□ -2.34
YDL196W	YDL196W	ATG8	P38182	117 aa	RIP-Chip data	0.42	□□□□□ -2.34	not detected
YDL196W	YDL196W	PHB1	P40961	287 aa		0.42	□□□□□ -2.34
YDL196W	YDL196W	YGR201C	P42936	225 aa		0.42	□□□□□ -2.34
YDL196W	YDL196W	YGL204C	P53089	101 aa		0.42	□□□□□ -2.34
YDL196W	YDL196W	YGR042W	P53227	271 aa		0.42	□□□□□ -2.34
YDL196W	YDL196W	YNL122C	P53921	115 aa	Predicted RBP	0.42	□□□□□ -2.34
YDL196W	YDL196W	AIM36	Q03798	255 aa		0.42	□□□□□ -2.34
YDL196W	YDL196W	YMR320W	Q04897	101 aa		0.42	□□□□□ -2.34
YDL196W	YDL196W	SOM1	Q05676	74 aa		0.42	□□□□□ -2.34
YDL196W	YDL196W	SPC3	Q12133	184 aa		0.42	□□□□□ -2.34
YDL196W	YDL196W	CMC4	Q3E7A9	73 aa		0.42	□□□□□ -2.34
YDL196W	YDL196W	RPS22B	Q3E7Y3	130 aa	Known RBP	0.42	□□□□□ -2.34
YDL196W	YDL196W	COA6	Q3E846	104 aa		0.42	□□□□□ -2.34

Retrieved 100 of 5,963 RNA–protein pairs in 79.1 ms