RNA–Protein interactions for RNA: YDL042C

SIR2, Transcript of Conserved NAD+ dependent histone deacetylase of the Sirtuin family, yeast

Gene SIR2, Length 1,689 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SIR2	YDL042C	CYT2	Q00873	224 aa		3.24	□□□□□ -1.89
SIR2	YDL042C	SEN2	P16658	377 aa		3.24	□□□□□ -1.89
SIR2	YDL042C	RPS20	P38701	121 aa	Known RBP	3.24	□□□□□ -1.89
SIR2	YDL042C	NQM1	P53228	333 aa	Predicted RBP	3.24	□□□□□ -1.89
SIR2	YDL042C	LSM7	P53905	115 aa	Known RBP	3.24	□□□□□ -1.89
SIR2	YDL042C	RCE1	Q03530	315 aa		3.24	□□□□□ -1.89
SIR2	YDL042C	AIM36	Q03798	255 aa		3.24	□□□□□ -1.89
SIR2	YDL042C	PST2	Q12335	198 aa	Known RBP	3.24	□□□□□ -1.89
SIR2	YDL042C	TSC3	Q3E790	80 aa		3.24	□□□□□ -1.89
SIR2	YDL042C	MRPS28	P21771	286 aa		3.23	□□□□□ -1.89
SIR2	YDL042C	UTP30	P36144	274 aa	Known RBP	3.23	□□□□□ -1.89
SIR2	YDL042C	NUP49	Q02199	472 aa		3.23	□□□□□ -1.89
SIR2	YDL042C	GRX5	Q02784	150 aa		3.23	□□□□□ -1.89
SIR2	YDL042C	YPL162C	Q12042	273 aa		3.23	□□□□□ -1.89
SIR2	YDL042C	RPL25	P04456	142 aa	Known RBP	3.22	□□□□□ -1.89
SIR2	YDL042C	YCL042W	P25572	119 aa		3.22	□□□□□ -1.89
SIR2	YDL042C	SIP18	P50263	79 aa		3.22	□□□□□ -1.89
SIR2	YDL042C	Q0297	Q9ZZV8	51 aa		3.22	□□□□□ -1.89
SIR2	YDL042C	QCR7	P00128	127 aa		3.21	□□□□□ -1.9
SIR2	YDL042C	AME1	P38313	324 aa		3.21	□□□□□ -1.9
SIR2	YDL042C	YBR220C	P38318	560 aa		3.21	□□□□□ -1.9
SIR2	YDL042C	IPT1	P38954	527 aa		3.21	□□□□□ -1.9
SIR2	YDL042C	TIR3	P40552	269 aa		3.21	□□□□□ -1.9
SIR2	YDL042C	LSM1	P47017	172 aa	Known RBP	3.21	□□□□□ -1.9
SIR2	YDL042C	VMA10	P48836	114 aa	Known RBP	3.21	□□□□□ -1.9
SIR2	YDL042C	YDR391C	Q04170	232 aa		3.21	□□□□□ -1.9
SIR2	YDL042C	FIT3	Q08907	204 aa		3.21	□□□□□ -1.9
SIR2	YDL042C	YER121W	P40076	114 aa		3.2	□□□□□ -1.9
SIR2	YDL042C	AGE2	P40529	298 aa		3.2	□□□□□ -1.9
SIR2	YDL042C	HHT1	P61830	136 aa		3.2	□□□□□ -1.9
SIR2	YDL042C	DYN1	P36022	4092 aa		3.2	□□□□□ -1.9
SIR2	YDL042C	COX5B	P00425	151 aa		3.2	□□□□□ -1.9
SIR2	YDL042C	QCR2	P07257	368 aa		3.2	□□□□□ -1.9
SIR2	YDL042C	DDI2	P0CH63	225 aa		3.2	□□□□□ -1.9
SIR2	YDL042C	DDI3	P0CH64	225 aa		3.2	□□□□□ -1.9
SIR2	YDL042C	SRP102	P36057	244 aa	Predicted RBP	3.2	□□□□□ -1.9
SIR2	YDL042C	FIG1	P38224	298 aa		3.2	□□□□□ -1.9
SIR2	YDL042C	PRS3	P38689	320 aa	Known RBP	3.2	□□□□□ -1.9
SIR2	YDL042C	YIP3	P53633	176 aa		3.2	□□□□□ -1.9
SIR2	YDL042C	YOR097C	Q12274	175 aa	Predicted RBP	3.2	□□□□□ -1.9
SIR2	YDL042C	YFR032C-B	Q8TGU2	87 aa		3.2	□□□□□ -1.9
SIR2	YDL042C	BPH1	P25356	2167 aa		3.19	□□□□□ -1.9
SIR2	YDL042C	IDP1	P21954	428 aa	Known RBP	3.19	□□□□□ -1.9
SIR2	YDL042C	CLG1	P35190	452 aa		3.19	□□□□□ -1.9
SIR2	YDL042C	DSE2	P38844	325 aa		3.19	□□□□□ -1.9
SIR2	YDL042C	POG1	P40473	351 aa		3.19	□□□□□ -1.9
SIR2	YDL042C	SAY1	P53324	424 aa		3.19	□□□□□ -1.9
SIR2	YDL042C	SED1	Q01589	338 aa		3.19	□□□□□ -1.9
SIR2	YDL042C	YMR315W	Q04869	349 aa	Known RBP	3.19	□□□□□ -1.9
SIR2	YDL042C	YOL160W	Q08321	113 aa		3.19	□□□□□ -1.9
SIR2	YDL042C	MED11	Q99278	115 aa		3.19	□□□□□ -1.9
SIR2	YDL042C	KIN28	P06242	306 aa		3.18	□□□□□ -1.9
SIR2	YDL042C	COX9	P07255	59 aa		3.18	□□□□□ -1.9
SIR2	YDL042C	BET1	P22804	142 aa		3.18	□□□□□ -1.9
SIR2	YDL042C	SVP26	P38869	228 aa		3.18	□□□□□ -1.9
SIR2	YDL042C	SRP14	P38985	146 aa		3.18	□□□□□ -1.9
SIR2	YDL042C	CCC1	P47818	322 aa		3.18	□□□□□ -1.9
SIR2	YDL042C	URA5	P13298	226 aa	Known RBP	3.17	□□□□□ -1.9
SIR2	YDL042C	MAG1	P22134	296 aa	Known RBP	3.17	□□□□□ -1.9
SIR2	YDL042C	UMP1	P38293	148 aa		3.17	□□□□□ -1.9
SIR2	YDL042C	VTC1	P40046	129 aa	RIP-Chip data	3.17	□□□□□ -1.9	not detected
SIR2	YDL042C	LSM4	P40070	187 aa	Known RBP	3.17	□□□□□ -1.9
SIR2	YDL042C	AIM25	P47140	327 aa		3.17	□□□□□ -1.9
SIR2	YDL042C	DOC1	P53068	250 aa		3.17	□□□□□ -1.9
SIR2	YDL042C	PAU12	P53343	120 aa		3.17	□□□□□ -1.9
SIR2	YDL042C	URA2	P07259	2214 aa	Known RBP	3.17	□□□□□ -1.9
SIR2	YDL042C	PDS1	P40316	373 aa	Predicted RBP	3.17	□□□□□ -1.9
SIR2	YDL042C	FLX1	P40464	311 aa		3.17	□□□□□ -1.9
SIR2	YDL042C	GVP36	P40531	326 aa	Known RBP	3.17	□□□□□ -1.9
SIR2	YDL042C	YIR020C	P40575	100 aa		3.17	□□□□□ -1.9
SIR2	YDL042C	GLR1	P41921	483 aa	Known RBP	3.17	□□□□□ -1.9
SIR2	YDL042C	SBH2	P52871	88 aa		3.17	□□□□□ -1.9
SIR2	YDL042C	YGL204C	P53089	101 aa		3.17	□□□□□ -1.9
SIR2	YDL042C	YDC1	Q02896	317 aa		3.17	□□□□□ -1.9
SIR2	YDL042C	PAU24	P38155	120 aa		3.16	□□□□□ -1.9
SIR2	YDL042C	PAM16	P42949	149 aa		3.16	□□□□□ -1.9
SIR2	YDL042C	YMR252C	Q04814	134 aa		3.16	□□□□□ -1.9
SIR2	YDL042C	YNG1	Q08465	219 aa		3.16	□□□□□ -1.9
SIR2	YDL042C	YGL041W-A	P0C5N3	154 aa		3.15	□□□□□ -1.9
SIR2	YDL042C	SNC2	P33328	115 aa		3.15	□□□□□ -1.9
SIR2	YDL042C	YNL217W	P40152	326 aa		3.15	□□□□□ -1.9
SIR2	YDL042C	YJL218W	P40892	196 aa	Known RBP	3.15	□□□□□ -1.9
SIR2	YDL042C	MMS2	P53152	137 aa		3.15	□□□□□ -1.9
SIR2	YDL042C	GAL83	Q04739	417 aa		3.15	□□□□□ -1.9
SIR2	YDL042C	RTR2	Q12378	196 aa		3.15	□□□□□ -1.9
SIR2	YDL042C	RPL30	P14120	105 aa	Known RBP	3.14	□□□□□ -1.91
SIR2	YDL042C	RPB3	P16370	318 aa	Known RBP	3.14	□□□□□ -1.91
SIR2	YDL042C	NVJ1	P38881	321 aa		3.14	□□□□□ -1.91
SIR2	YDL042C	RIO2	P40160	425 aa	Known RBP	3.14	□□□□□ -1.91
SIR2	YDL042C	YAE1	P47118	141 aa	Predicted RBP	3.14	□□□□□ -1.91
SIR2	YDL042C	DIG2	Q03373	323 aa	Known RBP	3.14	□□□□□ -1.91
SIR2	YDL042C	NMA1	Q06178	401 aa	Known RBP	3.14	□□□□□ -1.91
SIR2	YDL042C	PAU2	P32612	120 aa		3.14	□□□□□ -1.91
SIR2	YDL042C	ERJ5	P43613	295 aa	Predicted RBP	3.14	□□□□□ -1.91
SIR2	YDL042C	YGR042W	P53227	271 aa		3.14	□□□□□ -1.91
SIR2	YDL042C	YNR077C	P53758	84 aa		3.14	□□□□□ -1.91
SIR2	YDL042C	RFU1	Q08003	200 aa		3.14	□□□□□ -1.91
SIR2	YDL042C	RPL39	P04650	51 aa		3.13	□□□□□ -1.91
SIR2	YDL042C	SIR2	P06700	562 aa		3.13	□□□□□ -1.91
SIR2	YDL042C	AHC2	P25649	128 aa		3.13	□□□□□ -1.91

Retrieved 100 of 5,963 RNA–protein pairs in 87.4 ms