RNA–Protein interactions for RNA: YBR272C

HSM3, Transcript of Proteasome-interacting protein, yeast

Gene HSM3, Length 1,443 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
HSM3	YBR272C	URA5	P13298	226 aa	Known RBP	5.75	□□□□□ -1.49
HSM3	YBR272C	SEC11	P15367	167 aa		5.75	□□□□□ -1.49
HSM3	YBR272C	MDM10	P18409	493 aa		5.75	□□□□□ -1.49
HSM3	YBR272C	HSP10	P38910	106 aa		5.75	□□□□□ -1.49
HSM3	YBR272C	CTK2	P46962	323 aa		5.75	□□□□□ -1.49
HSM3	YBR272C	LSM3	P57743	89 aa	Known RBP	5.75	□□□□□ -1.49
HSM3	YBR272C	YER134C	P40081	178 aa		5.74	□□□□□ -1.49
HSM3	YBR272C	KNH1	P50112	268 aa		5.74	□□□□□ -1.49
HSM3	YBR272C	STP4	Q07351	490 aa		5.74	□□□□□ -1.49
HSM3	YBR272C	RFM1	Q12192	310 aa		5.74	□□□□□ -1.49
HSM3	YBR272C	DFM1	Q12743	341 aa	Known RBP	5.74	□□□□□ -1.49
HSM3	YBR272C	YMR030W-A	Q3E760	96 aa		5.74	□□□□□ -1.49
HSM3	YBR272C	KSH1	Q8TGJ3	72 aa		5.74	□□□□□ -1.49
HSM3	YBR272C	TAD3	Q9URQ3	322 aa		5.74	□□□□□ -1.49
HSM3	YBR272C	YGL010W	P25338	174 aa		5.74	□□□□□ -1.49
HSM3	YBR272C	PAM17	P36147	197 aa		5.74	□□□□□ -1.49
HSM3	YBR272C	YAR029W	P39549	74 aa		5.74	□□□□□ -1.49
HSM3	YBR272C	GPI2	P46961	280 aa		5.74	□□□□□ -1.49
HSM3	YBR272C	CSL4	P53859	292 aa	Predicted RBP	5.74	□□□□□ -1.49
HSM3	YBR272C	ROT1	Q03691	256 aa		5.74	□□□□□ -1.49
HSM3	YBR272C	ATO3	Q12359	275 aa		5.74	□□□□□ -1.49
HSM3	YBR272C	YEL076C-A	P0CX16	216 aa		5.73	□□□□□ -1.49
HSM3	YBR272C	YLR464W	P0CX17	216 aa		5.73	□□□□□ -1.49
HSM3	YBR272C	YCR050C	P25630	102 aa		5.73	□□□□□ -1.49
HSM3	YBR272C	YEL076C	P39971	216 aa		5.73	□□□□□ -1.49
HSM3	YBR272C	YFR054C	P43622	192 aa		5.73	□□□□□ -1.49
HSM3	YBR272C	UBC9	P50623	157 aa	Predicted RBP	5.73	□□□□□ -1.49
HSM3	YBR272C	MIC27	P50945	234 aa		5.73	□□□□□ -1.49
HSM3	YBR272C	RPC11	Q04307	110 aa	Predicted RBP	5.73	□□□□□ -1.49
HSM3	YBR272C	MCA1	Q08601	432 aa		5.73	□□□□□ -1.49
HSM3	YBR272C	TFS1	P14306	219 aa		5.72	□□□□□ -1.49
HSM3	YBR272C	RPS2	P25443	254 aa	Known RBP	5.72	□□□□□ -1.49
HSM3	YBR272C	YHR140W	P38842	239 aa		5.72	□□□□□ -1.49
HSM3	YBR272C	VPS25	P47142	202 aa		5.72	□□□□□ -1.49
HSM3	YBR272C	HST4	P53688	370 aa		5.72	□□□□□ -1.49
HSM3	YBR272C	CUZ1	P53899	274 aa		5.72	□□□□□ -1.49
HSM3	YBR272C	NHP2	P32495	156 aa	Predicted RBP	5.71	□□□□□ -1.5
HSM3	YBR272C	MBB1	P39534	108 aa		5.71	□□□□□ -1.5
HSM3	YBR272C	MPM1	P40364	252 aa		5.71	□□□□□ -1.5
HSM3	YBR272C	YPL062W	Q02781	134 aa		5.71	□□□□□ -1.5
HSM3	YBR272C	ASM4	Q05166	528 aa		5.71	□□□□□ -1.5
HSM3	YBR272C	YKL018C-A	Q3E7A7	99 aa		5.71	□□□□□ -1.5
HSM3	YBR272C	YCR024C-B	Q3E7Z8	88 aa		5.71	□□□□□ -1.5
HSM3	YBR272C	YFL041W-A	Q3E817	63 aa		5.71	□□□□□ -1.5
HSM3	YBR272C	YCR090C	P25654	182 aa	Known RBP	5.7	□□□□□ -1.5
HSM3	YBR272C	CNE1	P27825	502 aa		5.7	□□□□□ -1.5
HSM3	YBR272C	RPL14A	P36105	138 aa	Known RBP	5.7	□□□□□ -1.5
HSM3	YBR272C	YBR292C	P38357	123 aa		5.7	□□□□□ -1.5
HSM3	YBR272C	YHL018W	P38744	120 aa	Predicted RBP	5.7	□□□□□ -1.5
HSM3	YBR272C	SVP26	P38869	228 aa		5.7	□□□□□ -1.5
HSM3	YBR272C	MTR3	P48240	250 aa	Predicted RBP	5.7	□□□□□ -1.5
HSM3	YBR272C	GPI19	Q04082	140 aa		5.7	□□□□□ -1.5
HSM3	YBR272C	YLR296W	Q05898	108 aa		5.7	□□□□□ -1.5
HSM3	YBR272C	RPS10A	Q08745	105 aa	Predicted RBP	5.7	□□□□□ -1.5
HSM3	YBR272C	RRS1	Q08746	203 aa	Known RBP	5.7	□□□□□ -1.5
HSM3	YBR272C	RLM1	Q12224	676 aa		5.7	□□□□□ -1.5
HSM3	YBR272C	YAL063C-A	Q3E791	96 aa		5.7	□□□□□ -1.5
HSM3	YBR272C	IRA1	P18963	3092 aa		5.69	□□□□□ -1.5
HSM3	YBR272C	RPL30	P14120	105 aa	Known RBP	5.69	□□□□□ -1.5
HSM3	YBR272C	PRO1	P32264	428 aa		5.69	□□□□□ -1.5
HSM3	YBR272C	SWD2	P36104	329 aa	Predicted RBP	5.69	□□□□□ -1.5
HSM3	YBR272C	NRG2	P38082	220 aa		5.69	□□□□□ -1.5
HSM3	YBR272C	CTF8	P38877	133 aa		5.69	□□□□□ -1.5
HSM3	YBR272C	OST1	P41543	476 aa	Known RBP	5.69	□□□□□ -1.5
HSM3	YBR272C	YFL012W	P43580	148 aa		5.69	□□□□□ -1.5
HSM3	YBR272C	DSK2	P48510	373 aa		5.69	□□□□□ -1.5
HSM3	YBR272C	SHH4	Q06236	168 aa		5.69	□□□□□ -1.5
HSM3	YBR272C	RRT7	Q07829	113 aa		5.69	□□□□□ -1.5
HSM3	YBR272C	YOR385W	Q08909	290 aa		5.69	□□□□□ -1.5
HSM3	YBR272C	GCN1	P33892	2672 aa	Known RBP	5.68	□□□□□ -1.5
HSM3	YBR272C	YOL162W	P0CF19	215 aa		5.68	□□□□□ -1.5
HSM3	YBR272C	TOM6	P33448	61 aa		5.68	□□□□□ -1.5
HSM3	YBR272C	ASK1	P35734	292 aa		5.68	□□□□□ -1.5
HSM3	YBR272C	MRP21	P38175	177 aa		5.68	□□□□□ -1.5
HSM3	YBR272C	ATP23	P53722	227 aa		5.68	□□□□□ -1.5
HSM3	YBR272C	RIM9	Q04734	239 aa		5.68	□□□□□ -1.5
HSM3	YBR272C	YDL057W	Q07379	328 aa		5.68	□□□□□ -1.5
HSM3	YBR272C	DAD1	Q12248	94 aa		5.68	□□□□□ -1.5
HSM3	YBR272C	SME1	Q12330	94 aa	Predicted RBP	5.68	□□□□□ -1.5
HSM3	YBR272C	YPL247C	Q12523	523 aa		5.68	□□□□□ -1.5
HSM3	YBR272C	YLR146W-A	Q2V2P1	62 aa		5.68	□□□□□ -1.5
HSM3	YBR272C	YMC1	P32331	307 aa		5.67	□□□□□ -1.5
HSM3	YBR272C	UTH1	P36135	365 aa		5.67	□□□□□ -1.5
HSM3	YBR272C	ECM34	P38728	170 aa		5.67	□□□□□ -1.5
HSM3	YBR272C	SDS23	P53172	527 aa		5.67	□□□□□ -1.5
HSM3	YBR272C	PBP4	Q07362	185 aa	Known RBP	5.67	□□□□□ -1.5
HSM3	YBR272C	GAT3	Q07928	141 aa		5.67	□□□□□ -1.5
HSM3	YBR272C	IRC25	Q07951	179 aa		5.67	□□□□□ -1.5
HSM3	YBR272C	MSA1	Q08471	629 aa		5.67	□□□□□ -1.5
HSM3	YBR272C	YOR015W	Q12169	119 aa		5.67	□□□□□ -1.5
HSM3	YBR272C	SCS22	Q6Q595	175 aa		5.67	□□□□□ -1.5
HSM3	YBR272C	YCL021W-A	Q96VH3	125 aa		5.67	□□□□□ -1.5
HSM3	YBR272C	AQY1	P0CD91	305 aa		5.66	□□□□□ -1.5
HSM3	YBR272C	PUB1	P32588	453 aa	Known RBP RIP-Chip data	5.66	□□□□□ -1.5	not detected
HSM3	YBR272C	SMP1	P38128	452 aa		5.66	□□□□□ -1.5
HSM3	YBR272C	SHE1	P38200	338 aa		5.66	□□□□□ -1.5
HSM3	YBR272C	GPI18	P38211	433 aa		5.66	□□□□□ -1.5
HSM3	YBR272C	TIS11	P47977	285 aa		5.66	□□□□□ -1.5
HSM3	YBR272C	CPD1	P53314	239 aa		5.66	□□□□□ -1.5
HSM3	YBR272C	TDA7	P53882	636 aa	Predicted RBP	5.66	□□□□□ -1.5

Retrieved 100 of 5,963 RNA–protein pairs in 40.6 ms