RNA–Protein interactions for RNA: YBR189W

RPS9B, Transcript of Protein component of the small (40S) ribosomal subunit, yeast

Gene RPS9B, Length 588 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPS9B	YBR189W	USB1	Q12208	290 aa	Known RBP	3.02	□□□□□ -1.93
RPS9B	YBR189W	DFM1	Q12743	341 aa	Known RBP	3.02	□□□□□ -1.93
RPS9B	YBR189W	YPR117W	Q06116	2489 aa		3.02	□□□□□ -1.93
RPS9B	YBR189W	BLM10	P43583	2143 aa		3.01	□□□□□ -1.93
RPS9B	YBR189W	HTB1	P02293	131 aa	Known RBP	3.01	□□□□□ -1.93
RPS9B	YBR189W	HTB2	P02294	131 aa		3.01	□□□□□ -1.93
RPS9B	YBR189W	SEC59	P20048	519 aa		3.01	□□□□□ -1.93
RPS9B	YBR189W	SPO13	P23624	291 aa		3.01	□□□□□ -1.93
RPS9B	YBR189W	INO2	P26798	304 aa		3.01	□□□□□ -1.93
RPS9B	YBR189W	RPB9	P27999	122 aa		3.01	□□□□□ -1.93
RPS9B	YBR189W	YKL070W	P36087	169 aa		3.01	□□□□□ -1.93
RPS9B	YBR189W	YBR292C	P38357	123 aa		3.01	□□□□□ -1.93
RPS9B	YBR189W	SMD3	P43321	101 aa	Known RBP	3.01	□□□□□ -1.93
RPS9B	YBR189W	ECO1	P43605	281 aa		3.01	□□□□□ -1.93
RPS9B	YBR189W	HIT1	P46973	164 aa		3.01	□□□□□ -1.93
RPS9B	YBR189W	ERG25	P53045	309 aa		3.01	□□□□□ -1.93
RPS9B	YBR189W	MGA1	P53050	456 aa		3.01	□□□□□ -1.93
RPS9B	YBR189W	PAU4	P53427	120 aa		3.01	□□□□□ -1.93
RPS9B	YBR189W	CYT2	Q00873	224 aa		3.01	□□□□□ -1.93
RPS9B	YBR189W	DIG2	Q03373	323 aa	Known RBP	3.01	□□□□□ -1.93
RPS9B	YBR189W	YDR209C	Q03480	137 aa		3.01	□□□□□ -1.93
RPS9B	YBR189W	YMR090W	Q04304	227 aa	Known RBP	3.01	□□□□□ -1.93
RPS9B	YBR189W	PAU19	P0CE85	124 aa		3	□□□□□ -1.93
RPS9B	YBR189W	PAU21	P0CE86	164 aa		3	□□□□□ -1.93
RPS9B	YBR189W	PAU22	P0CE87	164 aa		3	□□□□□ -1.93
RPS9B	YBR189W	PAU1	P0CE88	120 aa		3	□□□□□ -1.93
RPS9B	YBR189W	PAU14	P0CE89	120 aa		3	□□□□□ -1.93
RPS9B	YBR189W	PAU6	P0CE90	120 aa		3	□□□□□ -1.93
RPS9B	YBR189W	PAU18	P0CE91	120 aa		3	□□□□□ -1.93
RPS9B	YBR189W	PAU8	P0CE92	120 aa		3	□□□□□ -1.93
RPS9B	YBR189W	PAU11	P0CE93	120 aa		3	□□□□□ -1.93
RPS9B	YBR189W	PAU3	P25610	124 aa		3	□□□□□ -1.93
RPS9B	YBR189W	RPL16B	P26785	198 aa	Known RBP	3	□□□□□ -1.93
RPS9B	YBR189W	ALK2	P32789	676 aa	Predicted RBP	3	□□□□□ -1.93
RPS9B	YBR189W	TRS20	P38334	175 aa		3	□□□□□ -1.93
RPS9B	YBR189W	PAU13	P38725	120 aa		3	□□□□□ -1.93
RPS9B	YBR189W	SUR2	P38992	349 aa		3	□□□□□ -1.93
RPS9B	YBR189W	COX15	P40086	486 aa		3	□□□□□ -1.93
RPS9B	YBR189W	GLC8	P41818	229 aa		3	□□□□□ -1.93
RPS9B	YBR189W	ARP3	P47117	449 aa	Known RBP	3	□□□□□ -1.93
RPS9B	YBR189W	YGR017W	P53210	297 aa		3	□□□□□ -1.93
RPS9B	YBR189W	YGR050C	P53231	118 aa		3	□□□□□ -1.93
RPS9B	YBR189W	SSU72	P53538	206 aa	Predicted RBP	3	□□□□□ -1.93
RPS9B	YBR189W	PAU10	Q03050	120 aa		3	□□□□□ -1.93
RPS9B	YBR189W	RSM10	Q03201	203 aa		3	□□□□□ -1.93
RPS9B	YBR189W	CUE4	Q04201	117 aa	Predicted RBP	3	□□□□□ -1.93
RPS9B	YBR189W	RIM9	Q04734	239 aa		3	□□□□□ -1.93
RPS9B	YBR189W	PAU20	Q08322	120 aa		3	□□□□□ -1.93
RPS9B	YBR189W	POC4	Q12245	148 aa	Predicted RBP	3	□□□□□ -1.93
RPS9B	YBR189W	AGC1	Q12482	902 aa		3	□□□□□ -1.93
RPS9B	YBR189W	PAU9	Q3E770	120 aa		3	□□□□□ -1.93
RPS9B	YBR189W	BOL1	Q3E793	110 aa		3	□□□□□ -1.93
RPS9B	YBR189W	COA6	Q3E846	104 aa		3	□□□□□ -1.93
RPS9B	YBR189W	YOR032W-A	Q8TGS1	66 aa		3	□□□□□ -1.93
RPS9B	YBR189W	CDC39	P25655	2108 aa	Known RBP	2.99	□□□□□ -1.93
RPS9B	YBR189W	NHP6A	P11632	93 aa	Known RBP	2.99	□□□□□ -1.93
RPS9B	YBR189W	FUN14	P18411	198 aa		2.99	□□□□□ -1.93
RPS9B	YBR189W	PRE1	P22141	198 aa	Known RBP	2.99	□□□□□ -1.93
RPS9B	YBR189W	SHB17	P36136	271 aa	Known RBP	2.99	□□□□□ -1.93
RPS9B	YBR189W	CUE1	P38428	203 aa		2.99	□□□□□ -1.93
RPS9B	YBR189W	YER084W	P40057	128 aa		2.99	□□□□□ -1.93
RPS9B	YBR189W	PAU5	P43575	122 aa		2.99	□□□□□ -1.93
RPS9B	YBR189W	GEP7	P53171	287 aa		2.99	□□□□□ -1.93
RPS9B	YBR189W	PDR17	P53844	350 aa		2.99	□□□□□ -1.93
RPS9B	YBR189W	YPL077C	Q02831	240 aa		2.99	□□□□□ -1.93
RPS9B	YBR189W	YMR007W	Q03675	126 aa		2.99	□□□□□ -1.93
RPS9B	YBR189W	RAF1	Q06891	181 aa		2.99	□□□□□ -1.93
RPS9B	YBR189W	PAM18	Q07914	168 aa		2.99	□□□□□ -1.93
RPS9B	YBR189W	RRS1	Q08746	203 aa	Known RBP	2.99	□□□□□ -1.93
RPS9B	YBR189W	FIT3	Q08907	204 aa		2.99	□□□□□ -1.93
RPS9B	YBR189W	SME1	Q12330	94 aa	Predicted RBP	2.99	□□□□□ -1.93
RPS9B	YBR189W	ATP5	P09457	212 aa		2.98	□□□□□ -1.93
RPS9B	YBR189W	DAL82	P21705	255 aa		2.98	□□□□□ -1.93
RPS9B	YBR189W	ROX3	P25046	220 aa		2.98	□□□□□ -1.93
RPS9B	YBR189W	BDH1	P39714	382 aa		2.98	□□□□□ -1.93
RPS9B	YBR189W	YDC1	Q02896	317 aa		2.98	□□□□□ -1.93
RPS9B	YBR189W	RCE1	Q03530	315 aa		2.98	□□□□□ -1.93
RPS9B	YBR189W	UPS1	Q05776	175 aa		2.98	□□□□□ -1.93
RPS9B	YBR189W	YLR179C	Q06252	201 aa	Known RBP	2.98	□□□□□ -1.93
RPS9B	YBR189W	FRQ1	Q06389	190 aa		2.98	□□□□□ -1.93
RPS9B	YBR189W	CSM4	Q08955	156 aa		2.98	□□□□□ -1.93
RPS9B	YBR189W	YDL180W	Q12301	547 aa		2.98	□□□□□ -1.93
RPS9B	YBR189W	YNR034W-A	Q3E841	98 aa		2.98	□□□□□ -1.93
RPS9B	YBR189W	YPR014C	Q6B0W2	109 aa		2.98	□□□□□ -1.93
RPS9B	YBR189W	Q0144	Q9ZZW2	109 aa		2.98	□□□□□ -1.93
RPS9B	YBR189W	RPS25B	P0C0T4	108 aa	Known RBP	2.97	□□□□□ -1.93
RPS9B	YBR189W	URA5	P13298	226 aa	Known RBP	2.97	□□□□□ -1.93
RPS9B	YBR189W	SRP21	P32342	167 aa		2.97	□□□□□ -1.93
RPS9B	YBR189W	GSP1	P32835	219 aa	Known RBP	2.97	□□□□□ -1.93
RPS9B	YBR189W	GSP2	P32836	220 aa	Known RBP	2.97	□□□□□ -1.93
RPS9B	YBR189W	MRPL39	P36533	70 aa		2.97	□□□□□ -1.93
RPS9B	YBR189W	YBR090C	P38253	122 aa		2.97	□□□□□ -1.93
RPS9B	YBR189W	SRP14	P38985	146 aa		2.97	□□□□□ -1.93
RPS9B	YBR189W	GON7	P46984	123 aa		2.97	□□□□□ -1.93
RPS9B	YBR189W	XPT1	P47165	209 aa		2.97	□□□□□ -1.93
RPS9B	YBR189W	TTI2	P47168	421 aa		2.97	□□□□□ -1.93
RPS9B	YBR189W	OST3	P48439	350 aa		2.97	□□□□□ -1.93
RPS9B	YBR189W	HSK3	P69852	69 aa		2.97	□□□□□ -1.93
RPS9B	YBR189W	SAE3	P89114	91 aa		2.97	□□□□□ -1.93
RPS9B	YBR189W	YMR166C	Q03829	368 aa		2.97	□□□□□ -1.93

Retrieved 100 of 5,963 RNA–protein pairs in 13.1 ms