RNA–Protein interactions for RNA: ENST00000586339.1

HDAC5-203, Transcript of histone deacetylase 5, humanhuman

TSL 2

Gene HDAC5, Length 465 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5-203ENST00000586339 CYP4F8P98187 520 aa15.12■□□□□ 0.01
HDAC5-203ENST00000586339 AMPD3Q01432 767 aa15.12■□□□□ 0.01
HDAC5-203ENST00000586339 E2F4Q16254 413 aa15.12■□□□□ 0.01
HDAC5-203ENST00000586339 DGKKQ5KSL6 1271 aa15.12■□□□□ 0.01
HDAC5-203ENST00000586339 CNNM4Q6P4Q7 775 aa15.12■□□□□ 0.01
HDAC5-203ENST00000586339 TOP6BLQ8N6T0 577 aa15.12■□□□□ 0.01
HDAC5-203ENST00000586339 GPR161Q8N6U8 529 aaKnown RBP15.12■□□□□ 0.01
HDAC5-203ENST00000586339 CELF5Q8N6W0 485 aaKnown RBP15.12■□□□□ 0.01
HDAC5-203ENST00000586339 ZSWIM2Q8NEG5 633 aa15.12■□□□□ 0.01
HDAC5-203ENST00000586339 SECISBP2LQ93073 1101 aaKnown RBP15.12■□□□□ 0.01
HDAC5-203ENST00000586339 SNX21Q969T3 373 aa15.12■□□□□ 0.01
HDAC5-203ENST00000586339 ANKRD36BP1Q96IX9 119 aa15.12■□□□□ 0.01
HDAC5-203ENST00000586339 FGFBP2Q9BYJ0 223 aa15.12■□□□□ 0.01
HDAC5-203ENST00000586339 PANK2Q9BZ23 570 aa15.12■□□□□ 0.01
HDAC5-203ENST00000586339 TRIM9Q9C026 710 aa15.12■□□□□ 0.01
HDAC5-203ENST00000586339 MTMR12Q9C0I1 747 aa15.12■□□□□ 0.01
HDAC5-203ENST00000586339 KIF9Q9HAQ2 790 aa15.12■□□□□ 0.01
HDAC5-203ENST00000586339 MAGEF1Q9HAY2 307 aa15.12■□□□□ 0.01
HDAC5-203ENST00000586339 THG1LQ9NWX6 298 aaKnown RBP15.12■□□□□ 0.01
HDAC5-203ENST00000586339 L1RE1Q9UN81 338 aa15.12■□□□□ 0.01
HDAC5-203ENST00000586339 SMG5Q9UPR3 1016 aaKnown RBP15.12■□□□□ 0.01
HDAC5-203ENST00000586339 GOLGA8IPA6NC78 632 aa15.11■□□□□ 0.01
HDAC5-203ENST00000586339 ZNF233A6NK53 670 aa15.11■□□□□ 0.01
HDAC5-203ENST00000586339 GOLGA8JA6NMD2 632 aa15.11■□□□□ 0.01
HDAC5-203ENST00000586339 CUTAO60888 179 aa15.11■□□□□ 0.01
HDAC5-203ENST00000586339 PRPF6O94906 941 aaKnown RBP15.11■□□□□ 0.01
HDAC5-203ENST00000586339 PAPSS2O95340 614 aaPredicted RBP15.11■□□□□ 0.01
HDAC5-203ENST00000586339 HMGA1P17096 107 aaKnown RBP15.11■□□□□ 0.01
HDAC5-203ENST00000586339 PCSK1P29120 753 aa15.11■□□□□ 0.01
HDAC5-203ENST00000586339 LHX1P48742 406 aa15.11■□□□□ 0.01
HDAC5-203ENST00000586339 RPL10AP62906 217 aaKnown RBP15.11■□□□□ 0.01
HDAC5-203ENST00000586339 BFSP1Q12934 665 aa15.11■□□□□ 0.01
HDAC5-203ENST00000586339 INTS6LQ5JSJ4 861 aaKnown RBP15.11■□□□□ 0.01
HDAC5-203ENST00000586339 TSSK4Q6SA08 328 aa15.11■□□□□ 0.01
HDAC5-203ENST00000586339 DPH6Q7L8W6 267 aa15.11■□□□□ 0.01
HDAC5-203ENST00000586339 KIAA2013Q8IYS2 634 aa15.11■□□□□ 0.01
HDAC5-203ENST00000586339 CMTM8Q8IZV2 173 aa15.11■□□□□ 0.01
HDAC5-203ENST00000586339 SPEM1Q8N4L4 309 aa15.11■□□□□ 0.01
HDAC5-203ENST00000586339 CSGALNACT2Q8N6G5 542 aa15.11■□□□□ 0.01
HDAC5-203ENST00000586339 GIPC2Q8TF65 315 aa15.11■□□□□ 0.01
HDAC5-203ENST00000586339 FUBP3Q96I24 572 aaKnown RBP eCLIP15.11■□□□□ 0.01
HDAC5-203ENST00000586339 LRRC3BQ96PB8 259 aa15.11■□□□□ 0.01
HDAC5-203ENST00000586339 PKMYT1Q99640 499 aa15.11■□□□□ 0.01
HDAC5-203ENST00000586339 PCIF1Q9H4Z3 704 aa15.11■□□□□ 0.01
HDAC5-203ENST00000586339 KIAA1586Q9HCI6 787 aa15.11■□□□□ 0.01
HDAC5-203ENST00000586339 PDE11AQ9HCR9 933 aa15.11■□□□□ 0.01
HDAC5-203ENST00000586339 TMLHEQ9NVH6 421 aa15.11■□□□□ 0.01
HDAC5-203ENST00000586339 INTS13Q9NVM9 706 aa15.11■□□□□ 0.01
HDAC5-203ENST00000586339 DDX43Q9NXZ2 648 aaKnown RBP15.11■□□□□ 0.01
HDAC5-203ENST00000586339 NCDNQ9UBB6 729 aa15.11■□□□□ 0.01
HDAC5-203ENST00000586339 UXTQ9UBK9 157 aaPredicted RBP15.11■□□□□ 0.01
HDAC5-203ENST00000586339 SIX4Q9UIU6 781 aa15.11■□□□□ 0.01
HDAC5-203ENST00000586339 R3HCC1Q9Y3T6 440 aaKnown RBP15.11■□□□□ 0.01
HDAC5-203ENST00000586339 UBE4BO95155 1302 aa15.11■□□□□ 0.01
HDAC5-203ENST00000586339 GABRDO14764 452 aa15.1■□□□□ 0.01
HDAC5-203ENST00000586339 PRPF40AO75400 957 aaKnown RBP15.1■□□□□ 0.01
HDAC5-203ENST00000586339 TNNC2P02585 160 aa15.1■□□□□ 0.01
HDAC5-203ENST00000586339 F11P03951 625 aa15.1■□□□□ 0.01
HDAC5-203ENST00000586339 KRT19P08727 400 aa15.1■□□□□ 0.01
HDAC5-203ENST00000586339 AVPR1AP37288 418 aa15.1■□□□□ 0.01
HDAC5-203ENST00000586339 CXCL12P48061 93 aa15.1■□□□□ 0.01
HDAC5-203ENST00000586339 NLRP12P59046 1061 aa15.1■□□□□ 0.01
HDAC5-203ENST00000586339 MYO1EQ12965 1108 aa15.1■□□□□ 0.01
HDAC5-203ENST00000586339 CFAP221Q4G0U5 840 aa15.1■□□□□ 0.01
HDAC5-203ENST00000586339 TMEM150AQ86TG1 271 aa15.1■□□□□ 0.01
HDAC5-203ENST00000586339 ADGRF2Q8IZF7 708 aa15.1■□□□□ 0.01
HDAC5-203ENST00000586339 SYNPOQ8N3V7 929 aa15.1■□□□□ 0.01
HDAC5-203ENST00000586339 IQUBQ8NA54 791 aa15.1■□□□□ 0.01
HDAC5-203ENST00000586339 MRPS31Q92665 395 aaKnown RBP15.1■□□□□ 0.01
HDAC5-203ENST00000586339 TRMT2BQ96GJ1 504 aaKnown RBP15.1■□□□□ 0.01
HDAC5-203ENST00000586339 SLC46A2Q9BY10 475 aa15.1■□□□□ 0.01
HDAC5-203ENST00000586339 SNX9Q9Y5X1 595 aa15.1■□□□□ 0.01
HDAC5-203ENST00000586339 SDK1Q7Z5N4 2213 aa15.1■□□□□ 0.01
HDAC5-203ENST00000586339 NCOR2Q9Y618 2525 aa15.1■□□□□ 0.01
HDAC5-203ENST00000586339 MYO16Q9Y6X6 1858 aa15.1■□□□□ 0.01
HDAC5-203ENST00000586339 NOL4O94818 638 aa15.09■□□□□ 0.01
HDAC5-203ENST00000586339 SOX9P48436 509 aa15.09■□□□□ 0.01
HDAC5-203ENST00000586339 SNRPFP62306 86 aaKnown RBP15.09■□□□□ 0.01
HDAC5-203ENST00000586339 ASIC1P78348 528 aa15.09■□□□□ 0.01
HDAC5-203ENST00000586339 CCINQ13939 588 aa15.09■□□□□ 0.01
HDAC5-203ENST00000586339 GAS6Q14393 721 aa15.09■□□□□ 0.01
HDAC5-203ENST00000586339 ZNF268Q14587 947 aaPredicted RBP15.09■□□□□ 0.01
HDAC5-203ENST00000586339 DUOXA2Q1HG44 320 aa15.09■□□□□ 0.01
HDAC5-203ENST00000586339 ITPRIPL2Q3MIP1 535 aa15.09■□□□□ 0.01
HDAC5-203ENST00000586339 FAM26FQ5R3K3 315 aa15.09■□□□□ 0.01
HDAC5-203ENST00000586339 TXNDC11Q6PKC3 985 aa15.09■□□□□ 0.01
HDAC5-203ENST00000586339 EPM2AIP1Q7L775 607 aaPredicted RBP15.09■□□□□ 0.01
HDAC5-203ENST00000586339 LIMS2Q7Z4I7 341 aa15.09■□□□□ 0.01
HDAC5-203ENST00000586339 WDR49Q8IV35 697 aa15.09■□□□□ 0.01
HDAC5-203ENST00000586339 NOC3LQ8WTT2 800 aaKnown RBP15.09■□□□□ 0.01
HDAC5-203ENST00000586339 RMDN1Q96DB5 314 aa15.09■□□□□ 0.01
HDAC5-203ENST00000586339 ZFYVE19Q96K21 471 aa15.09■□□□□ 0.01
HDAC5-203ENST00000586339 MYRFLQ96LU7 910 aa15.09■□□□□ 0.01
HDAC5-203ENST00000586339 CEP295NLQ96MC4 621 aa15.09■□□□□ 0.01
HDAC5-203ENST00000586339 PI4K2AQ9BTU6 479 aa15.09■□□□□ 0.01
HDAC5-203ENST00000586339 GTSE1Q9NYZ3 720 aa15.09■□□□□ 0.01
HDAC5-203ENST00000586339 HSPBP1Q9NZL4 362 aa15.09■□□□□ 0.01
HDAC5-203ENST00000586339 MYH10P35580 1976 aa15.09■□□□□ 0.01
HDAC5-203ENST00000586339 KIAA1549LQ6ZVL6 1849 aa15.08■□□□□ 0.01
HDAC5-203ENST00000586339 TULP1O00294 542 aaPredicted RBP15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms