RNA–Protein interactions for RNA: ENST00000554117.1

PNN-203, Transcript of pinin, desmosome associated protein, humanhuman

TSL 2

Gene PNN, Length 624 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNN-203ENST00000554117 ERMP1Q7Z2K6 904 aa11.54□□□□□ -0.56
PNN-203ENST00000554117 EFCAB13Q8IY85 973 aa11.54□□□□□ -0.56
PNN-203ENST00000554117 ADGRF2Q8IZF7 708 aa11.54□□□□□ -0.56
PNN-203ENST00000554117 LINC00301Q8NCQ3 95 aa11.54□□□□□ -0.56
PNN-203ENST00000554117 OR10T2Q8NGX3 314 aa11.54□□□□□ -0.56
PNN-203ENST00000554117 LEO1Q8WVC0 666 aaPredicted RBP11.54□□□□□ -0.56
PNN-203ENST00000554117 CCDC34Q96HJ3 373 aa11.54□□□□□ -0.56
PNN-203ENST00000554117 TMEM209Q96SK2 561 aa11.54□□□□□ -0.56
PNN-203ENST00000554117 MMS19Q96T76 1030 aa11.54□□□□□ -0.56
PNN-203ENST00000554117 LPIN3Q9BQK8 851 aa11.54□□□□□ -0.56
PNN-203ENST00000554117 DNAI2Q9GZS0 605 aa11.54□□□□□ -0.56
PNN-203ENST00000554117 DNAJC25Q9H1X3 360 aa11.54□□□□□ -0.56
PNN-203ENST00000554117 CHRDQ9H2X0 955 aa11.54□□□□□ -0.56
PNN-203ENST00000554117 ABCB6Q9NP58 842 aa11.54□□□□□ -0.56
PNN-203ENST00000554117 MTF2Q9Y483 593 aaPredicted RBP11.54□□□□□ -0.56
PNN-203ENST00000554117 CACNA1HO95180 2353 aa11.54□□□□□ -0.56
PNN-203ENST00000554117 ATG13O75143 517 aa11.53□□□□□ -0.56
PNN-203ENST00000554117 PHACTR2O75167 634 aa11.53□□□□□ -0.56
PNN-203ENST00000554117 SOAT2O75908 522 aa11.53□□□□□ -0.56
PNN-203ENST00000554117 KIF20AO95235 890 aa11.53□□□□□ -0.56
PNN-203ENST00000554117 WEE1P30291 646 aa11.53□□□□□ -0.56
PNN-203ENST00000554117 ADSSP30520 456 aa11.53□□□□□ -0.56
PNN-203ENST00000554117 CXCL12P48061 93 aa11.53□□□□□ -0.56
PNN-203ENST00000554117 CYP4F8P98187 520 aa11.53□□□□□ -0.56
PNN-203ENST00000554117 NR1H3Q13133 447 aa11.53□□□□□ -0.56
PNN-203ENST00000554117 ITPRIPL2Q3MIP1 535 aa11.53□□□□□ -0.56
PNN-203ENST00000554117 INTS6LQ5JSJ4 861 aaKnown RBP11.53□□□□□ -0.56
PNN-203ENST00000554117 FAM26FQ5R3K3 315 aa11.53□□□□□ -0.56
PNN-203ENST00000554117 WDR49Q8IV35 697 aa11.53□□□□□ -0.56
PNN-203ENST00000554117 SCN4BQ8IWT1 228 aa11.53□□□□□ -0.56
PNN-203ENST00000554117 KIAA2013Q8IYS2 634 aa11.53□□□□□ -0.56
PNN-203ENST00000554117 CMTM8Q8IZV2 173 aa11.53□□□□□ -0.56
PNN-203ENST00000554117 SYNPOQ8N3V7 929 aa11.53□□□□□ -0.56
PNN-203ENST00000554117 MAB21L3Q8N8X9 362 aa11.53□□□□□ -0.56
PNN-203ENST00000554117 CCDC26Q8TAB7 109 aa11.53□□□□□ -0.56
PNN-203ENST00000554117 GOLGA5Q8TBA6 731 aa11.53□□□□□ -0.56
PNN-203ENST00000554117 SNX21Q969T3 373 aa11.53□□□□□ -0.56
PNN-203ENST00000554117 FUBP3Q96I24 572 aaKnown RBP eCLIP11.53□□□□□ -0.56
PNN-203ENST00000554117 HPDLQ96IR7 371 aa11.53□□□□□ -0.56
PNN-203ENST00000554117 CBWD1Q9BRT8 395 aa11.53□□□□□ -0.56
PNN-203ENST00000554117 PI4K2AQ9BTU6 479 aa11.53□□□□□ -0.56
PNN-203ENST00000554117 STRA6Q9BX79 667 aa11.53□□□□□ -0.56
PNN-203ENST00000554117 TRIM9Q9C026 710 aa11.53□□□□□ -0.56
PNN-203ENST00000554117 MTMR12Q9C0I1 747 aa11.53□□□□□ -0.56
PNN-203ENST00000554117 CRISPLD1Q9H336 500 aa11.53□□□□□ -0.56
PNN-203ENST00000554117 SNX25Q9H3E2 840 aa11.53□□□□□ -0.56
PNN-203ENST00000554117 PDE11AQ9HCR9 933 aa11.53□□□□□ -0.56
PNN-203ENST00000554117 TRPC7Q9HCX4 862 aa11.53□□□□□ -0.56
PNN-203ENST00000554117 INTS13Q9NVM9 706 aa11.53□□□□□ -0.56
PNN-203ENST00000554117 GDAP2Q9NXN4 497 aa11.53□□□□□ -0.56
PNN-203ENST00000554117 HSPBP1Q9NZL4 362 aa11.53□□□□□ -0.56
PNN-203ENST00000554117 TFIP11Q9UBB9 837 aaKnown RBP11.53□□□□□ -0.56
PNN-203ENST00000554117 MAGEC2Q9UBF1 373 aaPredicted RBP11.53□□□□□ -0.56
PNN-203ENST00000554117 ATP8B3O60423 1300 aa11.53□□□□□ -0.56
PNN-203ENST00000554117 TRAV19A0A0A6YYK7 116 aa11.52□□□□□ -0.57
PNN-203ENST00000554117 SPECC1L-ADORA2AF8WAN1 911 aa11.52□□□□□ -0.57
PNN-203ENST00000554117 POLR2DO15514 142 aaKnown RBP11.52□□□□□ -0.57
PNN-203ENST00000554117 MOSPD3O75425 235 aa11.52□□□□□ -0.57
PNN-203ENST00000554117 CKMP06732 381 aa11.52□□□□□ -0.57
PNN-203ENST00000554117 USP17L7P0C7H9 530 aa11.52□□□□□ -0.57
PNN-203ENST00000554117 ZSCAN22P10073 491 aaPredicted RBP11.52□□□□□ -0.57
PNN-203ENST00000554117 ATF6P18850 670 aa11.52□□□□□ -0.57
PNN-203ENST00000554117 CNR2P34972 360 aa11.52□□□□□ -0.57
PNN-203ENST00000554117 CASP5P51878 434 aa11.52□□□□□ -0.57
PNN-203ENST00000554117 KCNA1Q09470 495 aa11.52□□□□□ -0.57
PNN-203ENST00000554117 MTAPQ13126 283 aa11.52□□□□□ -0.57
PNN-203ENST00000554117 KCNB1Q14721 858 aa11.52□□□□□ -0.57
PNN-203ENST00000554117 FOXD4L5Q5VV16 416 aaPredicted RBP11.52□□□□□ -0.57
PNN-203ENST00000554117 PRR23BQ6ZRT6 265 aa11.52□□□□□ -0.57
PNN-203ENST00000554117 UNC13DQ70J99 1090 aa11.52□□□□□ -0.57
PNN-203ENST00000554117 GAREM2Q75VX8 874 aa11.52□□□□□ -0.57
PNN-203ENST00000554117 PDCL2Q8N4E4 241 aa11.52□□□□□ -0.57
PNN-203ENST00000554117 SPEM1Q8N4L4 309 aa11.52□□□□□ -0.57
PNN-203ENST00000554117 CPA6Q8N4T0 437 aa11.52□□□□□ -0.57
PNN-203ENST00000554117 TTC9BQ8N6N2 239 aa11.52□□□□□ -0.57
PNN-203ENST00000554117 C1orf127Q8N9H9 656 aa11.52□□□□□ -0.57
PNN-203ENST00000554117 XXYLT1Q8NBI6 393 aa11.52□□□□□ -0.57
PNN-203ENST00000554117 TTC16Q8NEE8 873 aa11.52□□□□□ -0.57
PNN-203ENST00000554117 FOXD4L4Q8WXT5 416 aaPredicted RBP11.52□□□□□ -0.57
PNN-203ENST00000554117 CEP295NLQ96MC4 621 aa11.52□□□□□ -0.57
PNN-203ENST00000554117 LRRC3Q9BY71 257 aa11.52□□□□□ -0.57
PNN-203ENST00000554117 PRMT8Q9NR22 394 aaPredicted RBP11.52□□□□□ -0.57
PNN-203ENST00000554117 TDP1Q9NUW8 608 aa11.52□□□□□ -0.57
PNN-203ENST00000554117 KBTBD4Q9NVX7 518 aa11.52□□□□□ -0.57
PNN-203ENST00000554117 CDH9Q9ULB4 789 aa11.52□□□□□ -0.57
PNN-203ENST00000554117 MYBPHLA2RUH7 354 aa11.51□□□□□ -0.57
PNN-203ENST00000554117 TRIM66O15016 1216 aa11.51□□□□□ -0.57
PNN-203ENST00000554117 VNN2O95498 520 aa11.51□□□□□ -0.57
PNN-203ENST00000554117 F13A1P00488 732 aa11.51□□□□□ -0.57
PNN-203ENST00000554117 DLATP10515 647 aaKnown RBP11.51□□□□□ -0.57
PNN-203ENST00000554117 P4HA1P13674 534 aa11.51□□□□□ -0.57
PNN-203ENST00000554117 CTHP32929 405 aa11.51□□□□□ -0.57
PNN-203ENST00000554117 GRIK1P39086 918 aa11.51□□□□□ -0.57
PNN-203ENST00000554117 IFNAR2P48551 515 aa11.51□□□□□ -0.57
PNN-203ENST00000554117 NLRP12P59046 1061 aa11.51□□□□□ -0.57
PNN-203ENST00000554117 CYP27A1Q02318 531 aa11.51□□□□□ -0.57
PNN-203ENST00000554117 GRSF1Q12849 480 aaKnown RBP eCLIP11.51□□□□□ -0.57
PNN-203ENST00000554117 PDGFRLQ15198 375 aa11.51□□□□□ -0.57
PNN-203ENST00000554117 SNRNP35Q16560 246 aaKnown RBP11.51□□□□□ -0.57
PNN-203ENST00000554117 FOXD4L6Q3SYB3 417 aaPredicted RBP11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms