RNA–Protein interactions for RNA: ENST00000551320.1

PRPF40B-214, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 2

Gene PRPF40B, Length 455 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-214ENST00000551320 PCDHGA2Q9Y5H1 932 aa7.43□□□□□ -1.22
PRPF40B-214ENST00000551320 ZMYM2Q9UBW7 1377 aa7.43□□□□□ -1.22
PRPF40B-214ENST00000551320 ZFYVE26Q68DK2 2539 aa7.42□□□□□ -1.22
PRPF40B-214ENST00000551320 MTMR11A4FU01 709 aa7.42□□□□□ -1.22
PRPF40B-214ENST00000551320 SPECC1L-ADORA2AF8WAN1 911 aa7.42□□□□□ -1.22
PRPF40B-214ENST00000551320 K7ENM7 598 aa7.42□□□□□ -1.22
PRPF40B-214ENST00000551320 K7ESF4 209 aa7.42□□□□□ -1.22
PRPF40B-214ENST00000551320 ERVH48-1M5A8F1 160 aa7.42□□□□□ -1.22
PRPF40B-214ENST00000551320 SYN3O14994 580 aa7.42□□□□□ -1.22
PRPF40B-214ENST00000551320 CLDN3O15551 220 aa7.42□□□□□ -1.22
PRPF40B-214ENST00000551320 FAM189A1O60320 539 aa7.42□□□□□ -1.22
PRPF40B-214ENST00000551320 TOM1L1O75674 476 aa7.42□□□□□ -1.22
PRPF40B-214ENST00000551320 C1RP00736 705 aa7.42□□□□□ -1.22
PRPF40B-214ENST00000551320 ARSAP15289 507 aa7.42□□□□□ -1.22
PRPF40B-214ENST00000551320 ACAT1P24752 427 aaKnown RBP7.42□□□□□ -1.22
PRPF40B-214ENST00000551320 MCL1Q07820 350 aa7.42□□□□□ -1.22
PRPF40B-214ENST00000551320 NCOA4Q13772 614 aa7.42□□□□□ -1.22
PRPF40B-214ENST00000551320 PDIA5Q14554 519 aa7.42□□□□□ -1.22
PRPF40B-214ENST00000551320 KARSQ15046 597 aaKnown RBP7.42□□□□□ -1.22
PRPF40B-214ENST00000551320 ZBTB6Q15916 424 aa7.42□□□□□ -1.22
PRPF40B-214ENST00000551320 MAP7D1Q3KQU3 841 aa7.42□□□□□ -1.22
PRPF40B-214ENST00000551320 ZNF528Q3MIS6 628 aa7.42□□□□□ -1.22
PRPF40B-214ENST00000551320 OXLD1Q5BKU9 147 aa7.42□□□□□ -1.22
PRPF40B-214ENST00000551320 WSCD1Q658N2 575 aa7.42□□□□□ -1.22
PRPF40B-214ENST00000551320 OVOS1Q6IE37 1185 aa7.42□□□□□ -1.22
PRPF40B-214ENST00000551320 CENPPQ6IPU0 288 aa7.42□□□□□ -1.22
PRPF40B-214ENST00000551320 FAM173BQ6P4H8 233 aa7.42□□□□□ -1.22
PRPF40B-214ENST00000551320 USP37Q86T82 979 aa7.42□□□□□ -1.22
PRPF40B-214ENST00000551320 MFSD6LQ8IWD5 586 aa7.42□□□□□ -1.22
PRPF40B-214ENST00000551320 SFTPA1Q8IWL2 248 aa7.42□□□□□ -1.22
PRPF40B-214ENST00000551320 YAF2Q8IY57 180 aa7.42□□□□□ -1.22
PRPF40B-214ENST00000551320 ELMOD1Q8N336 334 aa7.42□□□□□ -1.22
PRPF40B-214ENST00000551320 MYCT1Q8N699 235 aa7.42□□□□□ -1.22
PRPF40B-214ENST00000551320 SNIP1Q8TAD8 396 aaKnown RBP7.42□□□□□ -1.22
PRPF40B-214ENST00000551320 NOC3LQ8WTT2 800 aaKnown RBP7.42□□□□□ -1.22
PRPF40B-214ENST00000551320 ELMO3Q96BJ8 720 aa7.42□□□□□ -1.22
PRPF40B-214ENST00000551320 ERLEC1Q96DZ1 483 aa7.42□□□□□ -1.22
PRPF40B-214ENST00000551320 CHFRQ96EP1 664 aa7.42□□□□□ -1.22
PRPF40B-214ENST00000551320 DRC1Q96MC2 740 aa7.42□□□□□ -1.22
PRPF40B-214ENST00000551320 FGFBP2Q9BYJ0 223 aa7.42□□□□□ -1.22
PRPF40B-214ENST00000551320 SLC38A7Q9NVC3 462 aa7.42□□□□□ -1.22
PRPF40B-214ENST00000551320 PPP4R2Q9NY27 417 aa7.42□□□□□ -1.22
PRPF40B-214ENST00000551320 MAGED2Q9UNF1 606 aaPredicted RBP7.42□□□□□ -1.22
PRPF40B-214ENST00000551320 PCDHB11Q9Y5F2 797 aa7.42□□□□□ -1.22
PRPF40B-214ENST00000551320 IGF2RP11717 2491 aa7.42□□□□□ -1.22
PRPF40B-214ENST00000551320 SCN1AP35498 2009 aa7.42□□□□□ -1.22
PRPF40B-214ENST00000551320 PDCD11Q14690 1871 aaKnown RBP7.41□□□□□ -1.22
PRPF40B-214ENST00000551320 MYH11P35749 1972 aa7.41□□□□□ -1.22
PRPF40B-214ENST00000551320 TTC24A2A3L6 582 aaPredicted RBP7.41□□□□□ -1.22
PRPF40B-214ENST00000551320 GOLGA8IPA6NC78 632 aa7.41□□□□□ -1.22
PRPF40B-214ENST00000551320 GOLGA8JA6NMD2 632 aa7.41□□□□□ -1.22
PRPF40B-214ENST00000551320 M0QZQ0 153 aa7.41□□□□□ -1.22
PRPF40B-214ENST00000551320 ZNF197O14709 1029 aa7.41□□□□□ -1.22
PRPF40B-214ENST00000551320 OAZ2O95190 189 aa7.41□□□□□ -1.22
PRPF40B-214ENST00000551320 EGFP01133 1207 aa7.41□□□□□ -1.22
PRPF40B-214ENST00000551320 NEFLP07196 543 aa7.41□□□□□ -1.22
PRPF40B-214ENST00000551320 POU2F2P09086 479 aa7.41□□□□□ -1.22
PRPF40B-214ENST00000551320 CLTAP09496 248 aa7.41□□□□□ -1.22
PRPF40B-214ENST00000551320 PLCG1P19174 1290 aa7.41□□□□□ -1.22
PRPF40B-214ENST00000551320 SPINK2P20155 84 aa7.41□□□□□ -1.22
PRPF40B-214ENST00000551320 GUCY2CP25092 1073 aa7.41□□□□□ -1.22
PRPF40B-214ENST00000551320 RPL9P32969 192 aaKnown RBP7.41□□□□□ -1.22
PRPF40B-214ENST00000551320 RPS9P46781 194 aaKnown RBP7.41□□□□□ -1.22
PRPF40B-214ENST00000551320 CXCL12P48061 93 aa7.41□□□□□ -1.22
PRPF40B-214ENST00000551320 LIG4P49917 911 aa7.41□□□□□ -1.22
PRPF40B-214ENST00000551320 LILRA4P59901 499 aa7.41□□□□□ -1.22
PRPF40B-214ENST00000551320 DDR2Q16832 855 aa7.41□□□□□ -1.22
PRPF40B-214ENST00000551320 MGAT5BQ3V5L5 792 aa7.41□□□□□ -1.22
PRPF40B-214ENST00000551320 TMEM119Q4V9L6 283 aa7.41□□□□□ -1.22
PRPF40B-214ENST00000551320 PPM1JQ5JR12 505 aa7.41□□□□□ -1.22
PRPF40B-214ENST00000551320 C9orf57Q5W0N0 161 aa7.41□□□□□ -1.22
PRPF40B-214ENST00000551320 TPGS2Q68CL5 300 aa7.41□□□□□ -1.22
PRPF40B-214ENST00000551320 LMBRD2Q68DH5 695 aaPredicted RBP7.41□□□□□ -1.22
PRPF40B-214ENST00000551320 TXNDC8Q6A555 127 aa7.41□□□□□ -1.22
PRPF40B-214ENST00000551320 CEP68Q76N32 757 aa7.41□□□□□ -1.22
PRPF40B-214ENST00000551320 DYMQ7RTS9 669 aa7.41□□□□□ -1.22
PRPF40B-214ENST00000551320 TMEM150AQ86TG1 271 aa7.41□□□□□ -1.22
PRPF40B-214ENST00000551320 KBTBD6Q86V97 674 aa7.41□□□□□ -1.22
PRPF40B-214ENST00000551320 EFCAB13Q8IY85 973 aa7.41□□□□□ -1.22
PRPF40B-214ENST00000551320 CYP4X1Q8N118 509 aa7.41□□□□□ -1.22
PRPF40B-214ENST00000551320 MAB21L3Q8N8X9 362 aa7.41□□□□□ -1.22
PRPF40B-214ENST00000551320 SYT2Q8N9I0 419 aaPredicted RBP7.41□□□□□ -1.22
PRPF40B-214ENST00000551320 APPL2Q8NEU8 664 aa7.41□□□□□ -1.22
PRPF40B-214ENST00000551320 CSGALNACT1Q8TDX6 532 aa7.41□□□□□ -1.22
PRPF40B-214ENST00000551320 IRF7Q92985 503 aa7.41□□□□□ -1.22
PRPF40B-214ENST00000551320 HHIPQ96QV1 700 aa7.41□□□□□ -1.22
PRPF40B-214ENST00000551320 SLC22A12Q96S37 553 aa7.41□□□□□ -1.22
PRPF40B-214ENST00000551320 CYP2S1Q96SQ9 504 aa7.41□□□□□ -1.22
PRPF40B-214ENST00000551320 PYM1Q9BRP8 204 aaKnown RBP7.41□□□□□ -1.22
PRPF40B-214ENST00000551320 LLPHQ9BRT6 129 aaKnown RBP7.41□□□□□ -1.22
PRPF40B-214ENST00000551320 PI4K2AQ9BTU6 479 aa7.41□□□□□ -1.22
PRPF40B-214ENST00000551320 MSTO1Q9BUK6 570 aa7.41□□□□□ -1.22
PRPF40B-214ENST00000551320 SLC46A2Q9BY10 475 aa7.41□□□□□ -1.22
PRPF40B-214ENST00000551320 PANK2Q9BZ23 570 aa7.41□□□□□ -1.22
PRPF40B-214ENST00000551320 OSBPL6Q9BZF3 934 aa7.41□□□□□ -1.22
PRPF40B-214ENST00000551320 ARRDC1-AS1Q9H2J1 176 aa7.41□□□□□ -1.22
PRPF40B-214ENST00000551320 EBF3Q9H4W6 596 aa7.41□□□□□ -1.22
PRPF40B-214ENST00000551320 ZDHHC4Q9NPG8 344 aa7.41□□□□□ -1.22
PRPF40B-214ENST00000551320 AVENQ9NQS1 362 aaPredicted RBP7.41□□□□□ -1.22
PRPF40B-214ENST00000551320 GKN1Q9NS71 199 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms