RNA–Protein interactions for RNA: ENST00000543048.5

TNFRSF1A-214, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 5

Gene TNFRSF1A, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-214ENST00000543048 ENGASEQ8NFI3 743 aa10.44□□□□□ -0.74
TNFRSF1A-214ENST00000543048 PARD3BQ8TEW8 1205 aa10.44□□□□□ -0.74
TNFRSF1A-214ENST00000543048 ZDHHC16Q969W1 377 aa10.44□□□□□ -0.74
TNFRSF1A-214ENST00000543048 KCNK17Q96T54 332 aa10.44□□□□□ -0.74
TNFRSF1A-214ENST00000543048 PRRX2Q99811 253 aa10.44□□□□□ -0.74
TNFRSF1A-214ENST00000543048 LRRC3Q9BY71 257 aa10.44□□□□□ -0.74
TNFRSF1A-214ENST00000543048 DNAJC25Q9H1X3 360 aa10.44□□□□□ -0.74
TNFRSF1A-214ENST00000543048 SLC2A4RGQ9NR83 387 aa10.44□□□□□ -0.74
TNFRSF1A-214ENST00000543048 TRAF3IP3Q9Y228 551 aa10.44□□□□□ -0.74
TNFRSF1A-214ENST00000543048 FRMD4BQ9Y2L6 1034 aa10.44□□□□□ -0.74
TNFRSF1A-214ENST00000543048 PCDHB5Q9Y5E4 795 aa10.44□□□□□ -0.74
TNFRSF1A-214ENST00000543048 PCDHGA10Q9Y5H3 936 aa10.44□□□□□ -0.74
TNFRSF1A-214ENST00000543048 OBSL1O75147 1896 aa10.43□□□□□ -0.74
TNFRSF1A-214ENST00000543048 NUP210Q8TEM1 1887 aaPredicted RBP10.43□□□□□ -0.74
TNFRSF1A-214ENST00000543048 SOAT2O75908 522 aa10.43□□□□□ -0.74
TNFRSF1A-214ENST00000543048 FGF19O95750 216 aa10.43□□□□□ -0.74
TNFRSF1A-214ENST00000543048 STAU1O95793 577 aaKnown RBP10.43□□□□□ -0.74
TNFRSF1A-214ENST00000543048 CFHP08603 1231 aa10.43□□□□□ -0.74
TNFRSF1A-214ENST00000543048 RPL13P26373 211 aaKnown RBP10.43□□□□□ -0.74
TNFRSF1A-214ENST00000543048 PCSK1P29120 753 aa10.43□□□□□ -0.74
TNFRSF1A-214ENST00000543048 ATICP31939 592 aa10.43□□□□□ -0.74
TNFRSF1A-214ENST00000543048 GNL1P36915 607 aaPredicted RBP10.43□□□□□ -0.74
TNFRSF1A-214ENST00000543048 GPC5P78333 572 aa10.43□□□□□ -0.74
TNFRSF1A-214ENST00000543048 CLDN10P78369 228 aa10.43□□□□□ -0.74
TNFRSF1A-214ENST00000543048 LSM11P83369 360 aaKnown RBP eCLIP10.43□□□□□ -0.74
TNFRSF1A-214ENST00000543048 FAM160A1Q05DH4 1040 aa10.43□□□□□ -0.74
TNFRSF1A-214ENST00000543048 TAF12Q16514 161 aa10.43□□□□□ -0.74
TNFRSF1A-214ENST00000543048 NFIL3Q16649 462 aa10.43□□□□□ -0.74
TNFRSF1A-214ENST00000543048 MGAT5BQ3V5L5 792 aa10.43□□□□□ -0.74
TNFRSF1A-214ENST00000543048 INTS6LQ5JSJ4 861 aaKnown RBP10.43□□□□□ -0.74
TNFRSF1A-214ENST00000543048 FAM78AQ5JUQ0 283 aa10.43□□□□□ -0.74
TNFRSF1A-214ENST00000543048 TANGO2Q6ICL3 276 aa10.43□□□□□ -0.74
TNFRSF1A-214ENST00000543048 OSTM1Q86WC4 334 aa10.43□□□□□ -0.74
TNFRSF1A-214ENST00000543048 ADGRF2Q8IZF7 708 aa10.43□□□□□ -0.74
TNFRSF1A-214ENST00000543048 SIX5Q8N196 739 aa10.43□□□□□ -0.74
TNFRSF1A-214ENST00000543048 GUF1Q8N442 669 aaKnown RBP10.43□□□□□ -0.74
TNFRSF1A-214ENST00000543048 TTC9BQ8N6N2 239 aa10.43□□□□□ -0.74
TNFRSF1A-214ENST00000543048 FAM200AQ8TCP9 573 aa10.43□□□□□ -0.74
TNFRSF1A-214ENST00000543048 PLEKHO2Q8TD55 490 aa10.43□□□□□ -0.74
TNFRSF1A-214ENST00000543048 PSMG2Q969U7 264 aa10.43□□□□□ -0.74
TNFRSF1A-214ENST00000543048 ELSPBP1Q96BH3 223 aa10.43□□□□□ -0.74
TNFRSF1A-214ENST00000543048 FAM122AQ96E09 287 aa10.43□□□□□ -0.74
TNFRSF1A-214ENST00000543048 ZSWIM3Q96MP5 696 aa10.43□□□□□ -0.74
TNFRSF1A-214ENST00000543048 TIGD1Q96MW7 591 aa10.43□□□□□ -0.74
TNFRSF1A-214ENST00000543048 MMS19Q96T76 1030 aa10.43□□□□□ -0.74
TNFRSF1A-214ENST00000543048 SEPT5Q99719 369 aaPredicted RBP10.43□□□□□ -0.74
TNFRSF1A-214ENST00000543048 KXD1Q9BQD3 176 aa10.43□□□□□ -0.74
TNFRSF1A-214ENST00000543048 GZF1Q9H116 711 aaPredicted RBP10.43□□□□□ -0.74
TNFRSF1A-214ENST00000543048 ZFP14Q9HCL3 533 aa10.43□□□□□ -0.74
TNFRSF1A-214ENST00000543048 TMLHEQ9NVH6 421 aa10.43□□□□□ -0.74
TNFRSF1A-214ENST00000543048 RMND1Q9NWS8 449 aa10.43□□□□□ -0.74
TNFRSF1A-214ENST00000543048 ABI2Q9NYB9 513 aaPredicted RBP10.43□□□□□ -0.74
TNFRSF1A-214ENST00000543048 HOOK1Q9UJC3 728 aaKnown RBP10.43□□□□□ -0.74
TNFRSF1A-214ENST00000543048 GTF3C4Q9UKN8 822 aa10.43□□□□□ -0.74
TNFRSF1A-214ENST00000543048 MAPK8IP1Q9UQF2 711 aa10.43□□□□□ -0.74
TNFRSF1A-214ENST00000543048 KRBA1A5PL33 1030 aa10.42□□□□□ -0.74
TNFRSF1A-214ENST00000543048 IKBKBO14920 756 aa10.42□□□□□ -0.74
TNFRSF1A-214ENST00000543048 MAPK13O15264 365 aa10.42□□□□□ -0.74
TNFRSF1A-214ENST00000543048 SMC2O95347 1197 aa10.42□□□□□ -0.74
TNFRSF1A-214ENST00000543048 C4BPAP04003 597 aaKnown RBP10.42□□□□□ -0.74
TNFRSF1A-214ENST00000543048 PDGFRBP09619 1106 aa10.42□□□□□ -0.74
TNFRSF1A-214ENST00000543048 GJA1P17302 382 aa10.42□□□□□ -0.74
TNFRSF1A-214ENST00000543048 NPR3P17342 541 aa10.42□□□□□ -0.74
TNFRSF1A-214ENST00000543048 WARSP23381 471 aaKnown RBP10.42□□□□□ -0.74
TNFRSF1A-214ENST00000543048 ACAT1P24752 427 aaKnown RBP10.42□□□□□ -0.74
TNFRSF1A-214ENST00000543048 LMO2P25791 158 aa10.42□□□□□ -0.74
TNFRSF1A-214ENST00000543048 CASP4P49662 377 aa10.42□□□□□ -0.74
TNFRSF1A-214ENST00000543048 CDR1P51861 262 aa10.42□□□□□ -0.74
TNFRSF1A-214ENST00000543048 VCPP55072 806 aaKnown RBP10.42□□□□□ -0.74
TNFRSF1A-214ENST00000543048 MYL6P60660 151 aa10.42□□□□□ -0.74
TNFRSF1A-214ENST00000543048 RPL10AP62906 217 aaKnown RBP10.42□□□□□ -0.74
TNFRSF1A-214ENST00000543048 PFKPQ01813 784 aa10.42□□□□□ -0.74
TNFRSF1A-214ENST00000543048 ADAM9Q13443 819 aa10.42□□□□□ -0.74
TNFRSF1A-214ENST00000543048 PNOCQ13519 176 aa10.42□□□□□ -0.74
TNFRSF1A-214ENST00000543048 VEPH1Q14D04 833 aa10.42□□□□□ -0.74
TNFRSF1A-214ENST00000543048 TEAD2Q15562 447 aa10.42□□□□□ -0.74
TNFRSF1A-214ENST00000543048 WDR72Q3MJ13 1102 aa10.42□□□□□ -0.74
TNFRSF1A-214ENST00000543048 CEP135Q66GS9 1140 aa10.42□□□□□ -0.74
TNFRSF1A-214ENST00000543048 FAM171BQ6P995 826 aa10.42□□□□□ -0.74
TNFRSF1A-214ENST00000543048 TMC8Q8IU68 726 aa10.42□□□□□ -0.74
TNFRSF1A-214ENST00000543048 FLCNQ8NFG4 579 aa10.42□□□□□ -0.74
TNFRSF1A-214ENST00000543048 SHKBP1Q8TBC3 707 aa10.42□□□□□ -0.74
TNFRSF1A-214ENST00000543048 GPR152Q8TDT2 470 aa10.42□□□□□ -0.74
TNFRSF1A-214ENST00000543048 GIPC2Q8TF65 315 aa10.42□□□□□ -0.74
TNFRSF1A-214ENST00000543048 SMARCD2Q92925 531 aa10.42□□□□□ -0.74
TNFRSF1A-214ENST00000543048 SYAP1Q96A49 352 aaPredicted RBP10.42□□□□□ -0.74
TNFRSF1A-214ENST00000543048 ASB16Q96NS5 453 aa10.42□□□□□ -0.74
TNFRSF1A-214ENST00000543048 GSDMAQ96QA5 445 aa10.42□□□□□ -0.74
TNFRSF1A-214ENST00000543048 PKMYT1Q99640 499 aa10.42□□□□□ -0.74
TNFRSF1A-214ENST00000543048 PI4K2AQ9BTU6 479 aa10.42□□□□□ -0.74
TNFRSF1A-214ENST00000543048 ADAM33Q9BZ11 813 aa10.42□□□□□ -0.74
TNFRSF1A-214ENST00000543048 GTPBP4Q9BZE4 634 aaKnown RBP10.42□□□□□ -0.74
TNFRSF1A-214ENST00000543048 PLA2G2FQ9BZM2 168 aa10.42□□□□□ -0.74
TNFRSF1A-214ENST00000543048 SNX25Q9H3E2 840 aa10.42□□□□□ -0.74
TNFRSF1A-214ENST00000543048 ATXN3LQ9H3M9 355 aa10.42□□□□□ -0.74
TNFRSF1A-214ENST00000543048 TRPV4Q9HBA0 871 aa10.42□□□□□ -0.74
TNFRSF1A-214ENST00000543048 ABCB6Q9NP58 842 aa10.42□□□□□ -0.74
TNFRSF1A-214ENST00000543048 MAGEC2Q9UBF1 373 aaPredicted RBP10.42□□□□□ -0.74
TNFRSF1A-214ENST00000543048 CDH9Q9ULB4 789 aa10.42□□□□□ -0.74
TNFRSF1A-214ENST00000543048 CA14Q9ULX7 337 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms