RNA–Protein interactions for RNA: ENST00000503842.5

PRDM2-213, Transcript of PR/SET domain 2, humanhuman

TSL 1 (best) BASIC

Gene PRDM2, Length 705 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM2-213ENST00000503842 AAASQ9NRG9 546 aa14.19□□□□□ -0.14
PRDM2-213ENST00000503842 STXBP5LQ9Y2K9 1186 aa14.19□□□□□ -0.14
PRDM2-213ENST00000503842 TIMM13Q9Y5L4 95 aaPredicted RBP14.19□□□□□ -0.14
PRDM2-213ENST00000503842 PDE4DIPQ5VU43 2346 aa14.19□□□□□ -0.14
PRDM2-213ENST00000503842 A8MXQ7 604 aa14.18□□□□□ -0.14
PRDM2-213ENST00000503842 BHMG1C9JSJ3 638 aaPredicted RBP14.18□□□□□ -0.14
PRDM2-213ENST00000503842 ARHGAP6O43182 974 aa14.18□□□□□ -0.14
PRDM2-213ENST00000503842 NRDCO43847 1150 aa14.18□□□□□ -0.14
PRDM2-213ENST00000503842 OAZ2O95190 189 aa14.18□□□□□ -0.14
PRDM2-213ENST00000503842 CHRNB2P17787 502 aa14.18□□□□□ -0.14
PRDM2-213ENST00000503842 LMO2P25791 158 aa14.18□□□□□ -0.14
PRDM2-213ENST00000503842 TKTP29401 623 aaKnown RBP14.18□□□□□ -0.14
PRDM2-213ENST00000503842 GNA15P30679 374 aa14.18□□□□□ -0.14
PRDM2-213ENST00000503842 BMP8BP34820 402 aa14.18□□□□□ -0.14
PRDM2-213ENST00000503842 PPM1AP35813 382 aa14.18□□□□□ -0.14
PRDM2-213ENST00000503842 RABGGTBP53611 331 aa14.18□□□□□ -0.14
PRDM2-213ENST00000503842 CDR2Q01850 454 aa14.18□□□□□ -0.14
PRDM2-213ENST00000503842 ORC1Q13415 861 aa14.18□□□□□ -0.14
PRDM2-213ENST00000503842 FAM171A1Q5VUB5 890 aa14.18□□□□□ -0.14
PRDM2-213ENST00000503842 OVOS1Q6IE37 1185 aa14.18□□□□□ -0.14
PRDM2-213ENST00000503842 METTL23Q86XA0 190 aa14.18□□□□□ -0.14
PRDM2-213ENST00000503842 ZNF677Q86XU0 584 aa14.18□□□□□ -0.14
PRDM2-213ENST00000503842 CCDC170Q8IYT3 715 aa14.18□□□□□ -0.14
PRDM2-213ENST00000503842 TFAP2BQ92481 460 aa14.18□□□□□ -0.14
PRDM2-213ENST00000503842 AGPAT1Q99943 283 aa14.18□□□□□ -0.14
PRDM2-213ENST00000503842 DPEP3Q9H4B8 488 aa14.18□□□□□ -0.14
PRDM2-213ENST00000503842 DDX43Q9NXZ2 648 aaKnown RBP14.18□□□□□ -0.14
PRDM2-213ENST00000503842 SPG21Q9NZD8 308 aa14.18□□□□□ -0.14
PRDM2-213ENST00000503842 KIAA1257Q9ULG3 409 aa14.18□□□□□ -0.14
PRDM2-213ENST00000503842 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP14.18□□□□□ -0.14
PRDM2-213ENST00000503842 GRXCR1A8MXD5 290 aa14.17□□□□□ -0.14
PRDM2-213ENST00000503842 DDX3XO00571 662 aaKnown RBP eCLIP14.17□□□□□ -0.14
PRDM2-213ENST00000503842 PDGFRBP09619 1106 aa14.17□□□□□ -0.14
PRDM2-213ENST00000503842 VDRP11473 427 aa14.17□□□□□ -0.14
PRDM2-213ENST00000503842 BRD2P25440 801 aaKnown RBP14.17□□□□□ -0.14
PRDM2-213ENST00000503842 PCSK1P29120 753 aa14.17□□□□□ -0.14
PRDM2-213ENST00000503842 FMO1Q01740 532 aa14.17□□□□□ -0.14
PRDM2-213ENST00000503842 MRPL58Q14197 206 aaKnown RBP14.17□□□□□ -0.14
PRDM2-213ENST00000503842 MTF1Q14872 753 aa14.17□□□□□ -0.14
PRDM2-213ENST00000503842 KIAA0319Q5VV43 1072 aa14.17□□□□□ -0.14
PRDM2-213ENST00000503842 TAF3Q5VWG9 929 aa14.17□□□□□ -0.14
PRDM2-213ENST00000503842 TAS1R1Q7RTX1 841 aa14.17□□□□□ -0.14
PRDM2-213ENST00000503842 ACOT1Q86TX2 421 aa14.17□□□□□ -0.14
PRDM2-213ENST00000503842 SLC30A5Q8TAD4 765 aa14.17□□□□□ -0.14
PRDM2-213ENST00000503842 LNX1Q8TBB1 728 aaPredicted RBP14.17□□□□□ -0.14
PRDM2-213ENST00000503842 ZNF606Q8WXB4 792 aa14.17□□□□□ -0.14
PRDM2-213ENST00000503842 TMEM169Q96HH4 297 aa14.17□□□□□ -0.14
PRDM2-213ENST00000503842 CCDC42Q96M95 316 aa14.17□□□□□ -0.14
PRDM2-213ENST00000503842 SYT15Q9BQS2 421 aa14.17□□□□□ -0.14
PRDM2-213ENST00000503842 HERC2P3Q9BVR0 1158 aa14.17□□□□□ -0.14
PRDM2-213ENST00000503842 CDH9Q9ULB4 789 aa14.17□□□□□ -0.14
PRDM2-213ENST00000503842 NENFQ9UMX5 172 aa14.17□□□□□ -0.14
PRDM2-213ENST00000503842 PCDHB12Q9Y5F1 795 aa14.17□□□□□ -0.14
PRDM2-213ENST00000503842 LINC01553A4QN01 128 aa14.16□□□□□ -0.14
PRDM2-213ENST00000503842 C3orf80F5H4A9 247 aa14.16□□□□□ -0.14
PRDM2-213ENST00000503842 O00370 1275 aa14.16□□□□□ -0.14
PRDM2-213ENST00000503842 THAP12O43422 761 aa14.16□□□□□ -0.14
PRDM2-213ENST00000503842 ARHGEF15O94989 841 aa14.16□□□□□ -0.14
PRDM2-213ENST00000503842 SOD2P04179 222 aa14.16□□□□□ -0.14
PRDM2-213ENST00000503842 MMEP08473 750 aa14.16□□□□□ -0.14
PRDM2-213ENST00000503842 CD19P15391 556 aa14.16□□□□□ -0.14
PRDM2-213ENST00000503842 TNFAIP3P21580 790 aa14.16□□□□□ -0.14
PRDM2-213ENST00000503842 ACAT1P24752 427 aaKnown RBP14.16□□□□□ -0.14
PRDM2-213ENST00000503842 KIF11P52732 1056 aa14.16□□□□□ -0.14
PRDM2-213ENST00000503842 YWHAHQ04917 246 aaPredicted RBP14.16□□□□□ -0.14
PRDM2-213ENST00000503842 BMS1Q14692 1282 aaKnown RBP14.16□□□□□ -0.14
PRDM2-213ENST00000503842 ARHGAP17Q68EM7 881 aa14.16□□□□□ -0.14
PRDM2-213ENST00000503842 DDX53Q86TM3 631 aaKnown RBP14.16□□□□□ -0.14
PRDM2-213ENST00000503842 METTL3Q86U44 580 aaKnown RBP14.16□□□□□ -0.14
PRDM2-213ENST00000503842 B3GALNT2Q8NCR0 500 aa14.16□□□□□ -0.14
PRDM2-213ENST00000503842 OR10T2Q8NGX3 314 aa14.16□□□□□ -0.14
PRDM2-213ENST00000503842 TNIP3Q96KP6 325 aa14.16□□□□□ -0.14
PRDM2-213ENST00000503842 HEXIM2Q96MH2 286 aaKnown RBP14.16□□□□□ -0.14
PRDM2-213ENST00000503842 PCDHB18PQ96TA0 734 aa14.16□□□□□ -0.14
PRDM2-213ENST00000503842 PKMYT1Q99640 499 aa14.16□□□□□ -0.14
PRDM2-213ENST00000503842 ACBD6Q9BR61 282 aa14.16□□□□□ -0.14
PRDM2-213ENST00000503842 TTPALQ9BTX7 342 aa14.16□□□□□ -0.14
PRDM2-213ENST00000503842 DNAI2Q9GZS0 605 aa14.16□□□□□ -0.14
PRDM2-213ENST00000503842 CHST7Q9NS84 486 aa14.16□□□□□ -0.14
PRDM2-213ENST00000503842 PUF60Q9UHX1 559 aaKnown RBP14.16□□□□□ -0.14
PRDM2-213ENST00000503842 PCDHGC3Q9UN70 934 aa14.16□□□□□ -0.14
PRDM2-213ENST00000503842 PCDHA11Q9Y5I1 949 aa14.16□□□□□ -0.14
PRDM2-213ENST00000503842 EPN1Q9Y6I3 576 aaPredicted RBP14.16□□□□□ -0.14
PRDM2-213ENST00000503842 GBF1Q92538 1859 aa14.15□□□□□ -0.14
PRDM2-213ENST00000503842 A0A087X0T9 212 aa14.15□□□□□ -0.14
PRDM2-213ENST00000503842 EIF3CLB5ME19 914 aaKnown RBP14.15□□□□□ -0.14
PRDM2-213ENST00000503842 MED7O43513 233 aa14.15□□□□□ -0.14
PRDM2-213ENST00000503842 AKR1B10O60218 316 aa14.15□□□□□ -0.14
PRDM2-213ENST00000503842 TBC1D4O60343 1298 aa14.15□□□□□ -0.14
PRDM2-213ENST00000503842 ATP2C2O75185 946 aa14.15□□□□□ -0.14
PRDM2-213ENST00000503842 NDUFA10O95299 355 aa14.15□□□□□ -0.14
PRDM2-213ENST00000503842 LCA5LO95447 670 aa14.15□□□□□ -0.14
PRDM2-213ENST00000503842 FAM228BP0C875 321 aa14.15□□□□□ -0.14
PRDM2-213ENST00000503842 MYOGP15173 224 aa14.15□□□□□ -0.14
PRDM2-213ENST00000503842 PTPN1P18031 435 aaKnown RBP14.15□□□□□ -0.14
PRDM2-213ENST00000503842 CYLC1P35663 651 aaPredicted RBP14.15□□□□□ -0.14
PRDM2-213ENST00000503842 BMPR1AP36894 532 aa14.15□□□□□ -0.14
PRDM2-213ENST00000503842 PSMC1P62191 440 aaKnown RBP14.15□□□□□ -0.14
PRDM2-213ENST00000503842 PLCB3Q01970 1234 aa14.15□□□□□ -0.14
PRDM2-213ENST00000503842 STILQ15468 1287 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 76.3 ms