RNA–Protein interactions for RNA: ENST00000503564.5

POLR2J3-207, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 3

Gene POLR2J3, Length 875 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-207ENST00000503564 DCP1BQ8IZD4 617 aaKnown RBP15.24■□□□□ 0.03
POLR2J3-207ENST00000503564 MAB21L3Q8N8X9 362 aa15.24■□□□□ 0.03
POLR2J3-207ENST00000503564 STKLD1Q8NE28 680 aa15.24■□□□□ 0.03
POLR2J3-207ENST00000503564 ZSWIM2Q8NEG5 633 aa15.24■□□□□ 0.03
POLR2J3-207ENST00000503564 LEO1Q8WVC0 666 aaPredicted RBP15.24■□□□□ 0.03
POLR2J3-207ENST00000503564 POMGNT1Q8WZA1 660 aa15.24■□□□□ 0.03
POLR2J3-207ENST00000503564 ZNF560Q96MR9 790 aa15.24■□□□□ 0.03
POLR2J3-207ENST00000503564 KIF9Q9HAQ2 790 aa15.24■□□□□ 0.03
POLR2J3-207ENST00000503564 GKN1Q9NS71 199 aa15.24■□□□□ 0.03
POLR2J3-207ENST00000503564 THG1LQ9NWX6 298 aaKnown RBP15.24■□□□□ 0.03
POLR2J3-207ENST00000503564 SMC3Q9UQE7 1217 aa15.24■□□□□ 0.03
POLR2J3-207ENST00000503564 PCDHB5Q9Y5E4 795 aa15.24■□□□□ 0.03
POLR2J3-207ENST00000503564 PTPRDP23468 1912 aa15.23■□□□□ 0.03
POLR2J3-207ENST00000503564 TRDMT1O14717 391 aaKnown RBP15.23■□□□□ 0.03
POLR2J3-207ENST00000503564 KCNA1Q09470 495 aa15.23■□□□□ 0.03
POLR2J3-207ENST00000503564 TAF12Q16514 161 aa15.23■□□□□ 0.03
POLR2J3-207ENST00000503564 PPM1JQ5JR12 505 aa15.23■□□□□ 0.03
POLR2J3-207ENST00000503564 LARP1BQ659C4 914 aaKnown RBP15.23■□□□□ 0.03
POLR2J3-207ENST00000503564 CEP68Q76N32 757 aa15.23■□□□□ 0.03
POLR2J3-207ENST00000503564 BRSK2Q8IWQ3 736 aa15.23■□□□□ 0.03
POLR2J3-207ENST00000503564 PDCL2Q8N4E4 241 aa15.23■□□□□ 0.03
POLR2J3-207ENST00000503564 KRI1Q8N9T8 703 aaKnown RBP15.23■□□□□ 0.03
POLR2J3-207ENST00000503564 CXorf38Q8TB03 319 aa15.23■□□□□ 0.03
POLR2J3-207ENST00000503564 GAB3Q8WWW8 586 aa15.23■□□□□ 0.03
POLR2J3-207ENST00000503564 EPSTI1Q96J88 318 aa15.23■□□□□ 0.03
POLR2J3-207ENST00000503564 PKMYT1Q99640 499 aa15.23■□□□□ 0.03
POLR2J3-207ENST00000503564 EBF3Q9H4W6 596 aa15.23■□□□□ 0.03
POLR2J3-207ENST00000503564 CCDC163A0A0D9SF12 145 aa15.22■□□□□ 0.03
POLR2J3-207ENST00000503564 SOBPA7XYQ1 873 aa15.22■□□□□ 0.03
POLR2J3-207ENST00000503564 ARSAP15289 507 aa15.22■□□□□ 0.03
POLR2J3-207ENST00000503564 POLR2BP30876 1174 aaKnown RBP15.22■□□□□ 0.03
POLR2J3-207ENST00000503564 AVPR1AP37288 418 aa15.22■□□□□ 0.03
POLR2J3-207ENST00000503564 PNPLA4P41247 253 aa15.22■□□□□ 0.03
POLR2J3-207ENST00000503564 TSPY1Q01534 308 aa15.22■□□□□ 0.03
POLR2J3-207ENST00000503564 ZNF268Q14587 947 aaPredicted RBP15.22■□□□□ 0.03
POLR2J3-207ENST00000503564 POSTNQ15063 836 aa15.22■□□□□ 0.03
POLR2J3-207ENST00000503564 PTPAQ15257 358 aa15.22■□□□□ 0.03
POLR2J3-207ENST00000503564 NFE2Q16621 373 aaPredicted RBP15.22■□□□□ 0.03
POLR2J3-207ENST00000503564 SDHAF4Q5VUM1 108 aa15.22■□□□□ 0.03
POLR2J3-207ENST00000503564 TXNDC8Q6A555 127 aa15.22■□□□□ 0.03
POLR2J3-207ENST00000503564 SCARA3Q6AZY7 606 aa15.22■□□□□ 0.03
POLR2J3-207ENST00000503564 DYMQ7RTS9 669 aa15.22■□□□□ 0.03
POLR2J3-207ENST00000503564 MON1AQ86VX9 555 aa15.22■□□□□ 0.03
POLR2J3-207ENST00000503564 C1orf127Q8N9H9 656 aa15.22■□□□□ 0.03
POLR2J3-207ENST00000503564 FAM84AQ96KN4 292 aa15.22■□□□□ 0.03
POLR2J3-207ENST00000503564 PI4K2AQ9BTU6 479 aa15.22■□□□□ 0.03
POLR2J3-207ENST00000503564 TDP1Q9NUW8 608 aa15.22■□□□□ 0.03
POLR2J3-207ENST00000503564 SEL1LQ9UBV2 794 aa15.22■□□□□ 0.03
POLR2J3-207ENST00000503564 STK17AQ9UEE5 414 aa15.22■□□□□ 0.03
POLR2J3-207ENST00000503564 L1RE1Q9UN81 338 aa15.22■□□□□ 0.03
POLR2J3-207ENST00000503564 MYMKA6NI61 221 aa15.21■□□□□ 0.03
POLR2J3-207ENST00000503564 FOXD2O60548 495 aaPredicted RBP15.21■□□□□ 0.03
POLR2J3-207ENST00000503564 PRPF40AO75400 957 aaKnown RBP15.21■□□□□ 0.03
POLR2J3-207ENST00000503564 NOL4O94818 638 aa15.21■□□□□ 0.03
POLR2J3-207ENST00000503564 EPN2O95208 641 aa15.21■□□□□ 0.03
POLR2J3-207ENST00000503564 EGFP01133 1207 aa15.21■□□□□ 0.03
POLR2J3-207ENST00000503564 ITGB3P05106 788 aa15.21■□□□□ 0.03
POLR2J3-207ENST00000503564 CSH1P0DML2 217 aa15.21■□□□□ 0.03
POLR2J3-207ENST00000503564 CSH2P0DML3 217 aa15.21■□□□□ 0.03
POLR2J3-207ENST00000503564 RAP1GAPP47736 663 aa15.21■□□□□ 0.03
POLR2J3-207ENST00000503564 PXNP49023 591 aaPredicted RBP15.21■□□□□ 0.03
POLR2J3-207ENST00000503564 CASP5P51878 434 aa15.21■□□□□ 0.03
POLR2J3-207ENST00000503564 LIMK1P53667 647 aa15.21■□□□□ 0.03
POLR2J3-207ENST00000503564 GRSF1Q12849 480 aaKnown RBP eCLIP15.21■□□□□ 0.03
POLR2J3-207ENST00000503564 BFSP1Q12934 665 aa15.21■□□□□ 0.03
POLR2J3-207ENST00000503564 CCDC142Q17RM4 750 aa15.21■□□□□ 0.03
POLR2J3-207ENST00000503564 INTS6LQ5JSJ4 861 aaKnown RBP15.21■□□□□ 0.03
POLR2J3-207ENST00000503564 L1TD1Q5T7N2 865 aaKnown RBP15.21■□□□□ 0.03
POLR2J3-207ENST00000503564 NAIF1Q69YI7 327 aaPredicted RBP15.21■□□□□ 0.03
POLR2J3-207ENST00000503564 OSTM1Q86WC4 334 aa15.21■□□□□ 0.03
POLR2J3-207ENST00000503564 MRPS31Q92665 395 aaKnown RBP15.21■□□□□ 0.03
POLR2J3-207ENST00000503564 DNAJC19Q96DA6 116 aa15.21■□□□□ 0.03
POLR2J3-207ENST00000503564 SAAL1Q96ER3 474 aa15.21■□□□□ 0.03
POLR2J3-207ENST00000503564 TRMT2BQ96GJ1 504 aaKnown RBP15.21■□□□□ 0.03
POLR2J3-207ENST00000503564 LOXL4Q96JB6 756 aa15.21■□□□□ 0.03
POLR2J3-207ENST00000503564 ACBD6Q9BR61 282 aa15.21■□□□□ 0.03
POLR2J3-207ENST00000503564 FAM213AQ9BRX8 229 aa15.21■□□□□ 0.03
POLR2J3-207ENST00000503564 FBRSL1Q9HCM7 1045 aaKnown RBP15.21■□□□□ 0.03
POLR2J3-207ENST00000503564 ABCB6Q9NP58 842 aa15.21■□□□□ 0.03
POLR2J3-207ENST00000503564 FBXO2Q9UK22 296 aaPredicted RBP15.21■□□□□ 0.03
POLR2J3-207ENST00000503564 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.21■□□□□ 0.03
POLR2J3-207ENST00000503564 CLIC4Q9Y696 253 aa15.21■□□□□ 0.03
POLR2J3-207ENST00000503564 RNF40O75150 1001 aa15.2■□□□□ 0.02
POLR2J3-207ENST00000503564 RPP40O75818 363 aaKnown RBP15.2■□□□□ 0.02
POLR2J3-207ENST00000503564 KRT37O76014 449 aa15.2■□□□□ 0.02
POLR2J3-207ENST00000503564 GAP43P17677 238 aa15.2■□□□□ 0.02
POLR2J3-207ENST00000503564 ACAT1P24752 427 aaKnown RBP15.2■□□□□ 0.02
POLR2J3-207ENST00000503564 TFAMQ00059 246 aaKnown RBP15.2■□□□□ 0.02
POLR2J3-207ENST00000503564 USP4Q13107 963 aa15.2■□□□□ 0.02
POLR2J3-207ENST00000503564 SF3A2Q15428 464 aaKnown RBP15.2■□□□□ 0.02
POLR2J3-207ENST00000503564 ZNF77Q15935 545 aa15.2■□□□□ 0.02
POLR2J3-207ENST00000503564 KBTBD6Q86V97 674 aa15.2■□□□□ 0.02
POLR2J3-207ENST00000503564 LRRC52Q8N7C0 313 aa15.2■□□□□ 0.02
POLR2J3-207ENST00000503564 EZH1Q92800 747 aaPredicted RBP15.2■□□□□ 0.02
POLR2J3-207ENST00000503564 MYRFLQ96LU7 910 aa15.2■□□□□ 0.02
POLR2J3-207ENST00000503564 FGFBP2Q9BYJ0 223 aa15.2■□□□□ 0.02
POLR2J3-207ENST00000503564 ARRDC1-AS1Q9H2J1 176 aa15.2■□□□□ 0.02
POLR2J3-207ENST00000503564 MRPL44Q9H9J2 332 aaKnown RBP15.2■□□□□ 0.02
POLR2J3-207ENST00000503564 OLFML3Q9NRN5 406 aa15.2■□□□□ 0.02
POLR2J3-207ENST00000503564 RXFP3Q9NSD7 469 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 107 ms