RNA–Protein interactions for RNA: ENST00000484186.5

NUP50-215, Transcript of nucleoporin 50, human

TSL 5

Gene NUP50, Length 431 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NUP50-215	ENST00000484186	C1orf228	Q6PIY5	440 aa		10.13	□□□□□ -0.79
NUP50-215	ENST00000484186	MAMSTR	Q6ZN01	415 aa		10.13	□□□□□ -0.79
NUP50-215	ENST00000484186	UNC13D	Q70J99	1090 aa		10.13	□□□□□ -0.79
NUP50-215	ENST00000484186	DPH6	Q7L8W6	267 aa		10.13	□□□□□ -0.79
NUP50-215	ENST00000484186	OSTM1	Q86WC4	334 aa		10.13	□□□□□ -0.79
NUP50-215	ENST00000484186	CBWD2	Q8IUF1	395 aa		10.13	□□□□□ -0.79
NUP50-215	ENST00000484186	TOP6BL	Q8N6T0	577 aa		10.13	□□□□□ -0.79
NUP50-215	ENST00000484186	OR5B17	Q8NGF7	314 aa		10.13	□□□□□ -0.79
NUP50-215	ENST00000484186	LEO1	Q8WVC0	666 aa	Predicted RBP	10.13	□□□□□ -0.79
NUP50-215	ENST00000484186	MSANTD3	Q96H12	275 aa		10.13	□□□□□ -0.79
NUP50-215	ENST00000484186	IER2	Q9BTL4	223 aa		10.13	□□□□□ -0.79
NUP50-215	ENST00000484186	SLC46A2	Q9BY10	475 aa		10.13	□□□□□ -0.79
NUP50-215	ENST00000484186	CHRD	Q9H2X0	955 aa		10.13	□□□□□ -0.79
NUP50-215	ENST00000484186	FAM13B	Q9NYF5	915 aa		10.13	□□□□□ -0.79
NUP50-215	ENST00000484186	GTF3C4	Q9UKN8	822 aa		10.13	□□□□□ -0.79
NUP50-215	ENST00000484186	CFAP45	Q9UL16	551 aa		10.13	□□□□□ -0.79
NUP50-215	ENST00000484186	RIF1	Q5UIP0	2472 aa	Known RBP	10.13	□□□□□ -0.79
NUP50-215	ENST00000484186	TCHH	Q07283	1943 aa		10.13	□□□□□ -0.79
NUP50-215	ENST00000484186	PVALEF	A0A1B0GWK0	134 aa		10.12	□□□□□ -0.79
NUP50-215	ENST00000484186	MYBPHL	A2RUH7	354 aa		10.12	□□□□□ -0.79
NUP50-215	ENST00000484186	CLIC2	O15247	247 aa		10.12	□□□□□ -0.79
NUP50-215	ENST00000484186	TGFB1I1	O43294	461 aa		10.12	□□□□□ -0.79
NUP50-215	ENST00000484186	CHRNB1	P11230	501 aa		10.12	□□□□□ -0.79
NUP50-215	ENST00000484186	ACAT1	P24752	427 aa	Known RBP	10.12	□□□□□ -0.79
NUP50-215	ENST00000484186	CYP2F1	P24903	491 aa		10.12	□□□□□ -0.79
NUP50-215	ENST00000484186	DDX6	P26196	483 aa	Known RBP eCLIP	10.12	□□□□□ -0.79
NUP50-215	ENST00000484186	PCSK1	P29120	753 aa		10.12	□□□□□ -0.79
NUP50-215	ENST00000484186	CASP1	P29466	404 aa		10.12	□□□□□ -0.79
NUP50-215	ENST00000484186	ME1	P48163	572 aa		10.12	□□□□□ -0.79
NUP50-215	ENST00000484186	SOX9	P48436	509 aa		10.12	□□□□□ -0.79
NUP50-215	ENST00000484186	GPR15	P49685	360 aa		10.12	□□□□□ -0.79
NUP50-215	ENST00000484186	NLRP12	P59046	1061 aa		10.12	□□□□□ -0.79
NUP50-215	ENST00000484186	RPL10A	P62906	217 aa	Known RBP	10.12	□□□□□ -0.79
NUP50-215	ENST00000484186	PLCB2	Q00722	1185 aa		10.12	□□□□□ -0.79
NUP50-215	ENST00000484186	EHHADH	Q08426	723 aa		10.12	□□□□□ -0.79
NUP50-215	ENST00000484186	DDR2	Q16832	855 aa		10.12	□□□□□ -0.79
NUP50-215	ENST00000484186	SOWAHA	Q2M3V2	549 aa		10.12	□□□□□ -0.79
NUP50-215	ENST00000484186	RESP18	Q5W5W9	173 aa		10.12	□□□□□ -0.79
NUP50-215	ENST00000484186	TRAPPC11	Q7Z392	1133 aa		10.12	□□□□□ -0.79
NUP50-215	ENST00000484186	LIMS2	Q7Z4I7	341 aa		10.12	□□□□□ -0.79
NUP50-215	ENST00000484186	TMEM150A	Q86TG1	271 aa		10.12	□□□□□ -0.79
NUP50-215	ENST00000484186	WDR49	Q8IV35	697 aa		10.12	□□□□□ -0.79
NUP50-215	ENST00000484186	NELFCD	Q8IXH7	590 aa		10.12	□□□□□ -0.79
NUP50-215	ENST00000484186	ADGRF2	Q8IZF7	708 aa		10.12	□□□□□ -0.79
NUP50-215	ENST00000484186	CMTM8	Q8IZV2	173 aa		10.12	□□□□□ -0.79
NUP50-215	ENST00000484186	CELF5	Q8N6W0	485 aa	Known RBP	10.12	□□□□□ -0.79
NUP50-215	ENST00000484186	MAB21L3	Q8N8X9	362 aa		10.12	□□□□□ -0.79
NUP50-215	ENST00000484186	SUMF1	Q8NBK3	374 aa		10.12	□□□□□ -0.79
NUP50-215	ENST00000484186	RDH13	Q8NBN7	331 aa		10.12	□□□□□ -0.79
NUP50-215	ENST00000484186	SPRYD3	Q8NCJ5	442 aa		10.12	□□□□□ -0.79
NUP50-215	ENST00000484186	ZBTB44	Q8NCP5	570 aa		10.12	□□□□□ -0.79
NUP50-215	ENST00000484186	BPIFB1	Q8TDL5	484 aa		10.12	□□□□□ -0.79
NUP50-215	ENST00000484186	SCFD1	Q8WVM8	642 aa		10.12	□□□□□ -0.79
NUP50-215	ENST00000484186	ATRIP	Q8WXE1	791 aa		10.12	□□□□□ -0.79
NUP50-215	ENST00000484186	NELL1	Q92832	810 aa		10.12	□□□□□ -0.79
NUP50-215	ENST00000484186	HPDL	Q96IR7	371 aa		10.12	□□□□□ -0.79
NUP50-215	ENST00000484186	ZFYVE19	Q96K21	471 aa		10.12	□□□□□ -0.79
NUP50-215	ENST00000484186	PKMYT1	Q99640	499 aa		10.12	□□□□□ -0.79
NUP50-215	ENST00000484186	BLZF1	Q9H2G9	400 aa		10.12	□□□□□ -0.79
NUP50-215	ENST00000484186	ABCB6	Q9NP58	842 aa		10.12	□□□□□ -0.79
NUP50-215	ENST00000484186	PRMT8	Q9NR22	394 aa	Predicted RBP	10.12	□□□□□ -0.79
NUP50-215	ENST00000484186	AGPAT3	Q9NRZ7	376 aa		10.12	□□□□□ -0.79
NUP50-215	ENST00000484186	THG1L	Q9NWX6	298 aa	Known RBP	10.12	□□□□□ -0.79
NUP50-215	ENST00000484186	ZSCAN32	Q9NX65	697 aa		10.12	□□□□□ -0.79
NUP50-215	ENST00000484186	RCOR1	Q9UKL0	485 aa		10.12	□□□□□ -0.79
NUP50-215	ENST00000484186	MAGED2	Q9UNF1	606 aa	Predicted RBP	10.12	□□□□□ -0.79
NUP50-215	ENST00000484186	PCDHGA2	Q9Y5H1	932 aa		10.12	□□□□□ -0.79
NUP50-215	ENST00000484186	FAM186A	A6NE01	2351 aa		10.12	□□□□□ -0.79
NUP50-215	ENST00000484186	UBE4B	O95155	1302 aa		10.11	□□□□□ -0.79
NUP50-215	ENST00000484186	PTPRJ	Q12913	1337 aa		10.11	□□□□□ -0.79
NUP50-215	ENST00000484186	SLC38A8	A6NNN8	435 aa		10.11	□□□□□ -0.79
NUP50-215	ENST00000484186	SOBP	A7XYQ1	873 aa		10.11	□□□□□ -0.79
NUP50-215	ENST00000484186	SPECC1L-ADORA2A	F8WAN1	911 aa		10.11	□□□□□ -0.79
NUP50-215	ENST00000484186	HCRT	O43612	131 aa		10.11	□□□□□ -0.79
NUP50-215	ENST00000484186	PRAMEF12	O95522	483 aa		10.11	□□□□□ -0.79
NUP50-215	ENST00000484186	CST3	P01034	146 aa	Predicted RBP	10.11	□□□□□ -0.79
NUP50-215	ENST00000484186	TNNI1	P19237	187 aa		10.11	□□□□□ -0.79
NUP50-215	ENST00000484186	AVPR1A	P37288	418 aa		10.11	□□□□□ -0.79
NUP50-215	ENST00000484186	AFM	P43652	599 aa		10.11	□□□□□ -0.79
NUP50-215	ENST00000484186	DNM1	Q05193	864 aa	Known RBP	10.11	□□□□□ -0.79
NUP50-215	ENST00000484186	CUL4B	Q13620	913 aa		10.11	□□□□□ -0.79
NUP50-215	ENST00000484186	PKP1	Q13835	747 aa		10.11	□□□□□ -0.79
NUP50-215	ENST00000484186	PPP2R5D	Q14738	602 aa		10.11	□□□□□ -0.79
NUP50-215	ENST00000484186	SNRNP35	Q16560	246 aa	Known RBP	10.11	□□□□□ -0.79
NUP50-215	ENST00000484186	CFAP221	Q4G0U5	840 aa		10.11	□□□□□ -0.79
NUP50-215	ENST00000484186	SDHAF4	Q5VUM1	108 aa		10.11	□□□□□ -0.79
NUP50-215	ENST00000484186	TXNDC8	Q6A555	127 aa		10.11	□□□□□ -0.79
NUP50-215	ENST00000484186	FAM171B	Q6P995	826 aa		10.11	□□□□□ -0.79
NUP50-215	ENST00000484186	TSSK4	Q6SA08	328 aa		10.11	□□□□□ -0.79
NUP50-215	ENST00000484186	HS2ST1	Q7LGA3	356 aa		10.11	□□□□□ -0.79
NUP50-215	ENST00000484186	MON1A	Q86VX9	555 aa		10.11	□□□□□ -0.79
NUP50-215	ENST00000484186	RALGPS2	Q86X27	583 aa	Predicted RBP	10.11	□□□□□ -0.79
NUP50-215	ENST00000484186	SPATA2L	Q8IUW3	424 aa	Predicted RBP	10.11	□□□□□ -0.79
NUP50-215	ENST00000484186	XXYLT1	Q8NBI6	393 aa		10.11	□□□□□ -0.79
NUP50-215	ENST00000484186	TTC8	Q8TAM2	541 aa		10.11	□□□□□ -0.79
NUP50-215	ENST00000484186	RUBCN	Q92622	972 aa		10.11	□□□□□ -0.79
NUP50-215	ENST00000484186	MRPS31	Q92665	395 aa	Known RBP	10.11	□□□□□ -0.79
NUP50-215	ENST00000484186	FUBP3	Q96I24	572 aa	Known RBP eCLIP	10.11	□□□□□ -0.79
NUP50-215	ENST00000484186	FNBP1	Q96RU3	617 aa		10.11	□□□□□ -0.79
NUP50-215	ENST00000484186	FAM126A	Q9BYI3	521 aa	Predicted RBP	10.11	□□□□□ -0.79

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