RNA–Protein interactions for RNA: ENST00000440240.5

CPNE1-219, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 746 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-219ENST00000440240 CCDC65Q8IXS2 484 aa22.31■■□□□ 1.16
CPNE1-219ENST00000440240 ZSWIM2Q8NEG5 633 aa22.31■■□□□ 1.16
CPNE1-219ENST00000440240 TTC8Q8TAM2 541 aa22.31■■□□□ 1.16
CPNE1-219ENST00000440240 SPATA18Q8TC71 538 aa22.31■■□□□ 1.16
CPNE1-219ENST00000440240 LEO1Q8WVC0 666 aaPredicted RBP22.31■■□□□ 1.16
CPNE1-219ENST00000440240 PI4K2AQ9BTU6 479 aa22.31■■□□□ 1.16
CPNE1-219ENST00000440240 ABCB6Q9NP58 842 aa22.31■■□□□ 1.16
CPNE1-219ENST00000440240 GKN1Q9NS71 199 aa22.31■■□□□ 1.16
CPNE1-219ENST00000440240 RBM12Q9NTZ6 932 aaKnown RBP22.31■■□□□ 1.16
CPNE1-219ENST00000440240 GDAP2Q9NXN4 497 aa22.31■■□□□ 1.16
CPNE1-219ENST00000440240 DDX43Q9NXZ2 648 aaKnown RBP22.31■■□□□ 1.16
CPNE1-219ENST00000440240 L1RE1Q9UN81 338 aa22.31■■□□□ 1.16
CPNE1-219ENST00000440240 MTMR6Q9Y217 621 aa22.31■■□□□ 1.16
CPNE1-219ENST00000440240 GOLGA8IPA6NC78 632 aa22.3■■□□□ 1.16
CPNE1-219ENST00000440240 GOLGA8JA6NMD2 632 aa22.3■■□□□ 1.16
CPNE1-219ENST00000440240 PRR5-ARHGAP8B1AHC4 643 aa22.3■■□□□ 1.16
CPNE1-219ENST00000440240 WNT7BP56706 349 aa22.3■■□□□ 1.16
CPNE1-219ENST00000440240 RPL10AP62906 217 aaKnown RBP22.3■■□□□ 1.16
CPNE1-219ENST00000440240 ARHGAP8P85298 464 aa22.3■■□□□ 1.16
CPNE1-219ENST00000440240 LMNB2Q03252 620 aa22.3■■□□□ 1.16
CPNE1-219ENST00000440240 TMEM150AQ86TG1 271 aa22.3■■□□□ 1.16
CPNE1-219ENST00000440240 MAB21L3Q8N8X9 362 aa22.3■■□□□ 1.16
CPNE1-219ENST00000440240 MRPS31Q92665 395 aaKnown RBP22.3■■□□□ 1.16
CPNE1-219ENST00000440240 CBWD1Q9BRT8 395 aa22.3■■□□□ 1.16
CPNE1-219ENST00000440240 TMLHEQ9NVH6 421 aa22.3■■□□□ 1.16
CPNE1-219ENST00000440240 UXTQ9UBK9 157 aaPredicted RBP22.3■■□□□ 1.16
CPNE1-219ENST00000440240 A0A087X0B3 334 aa22.29■■□□□ 1.16
CPNE1-219ENST00000440240 PRPF6O94906 941 aaKnown RBP22.29■■□□□ 1.16
CPNE1-219ENST00000440240 KRT19P08727 400 aa22.29■■□□□ 1.16
CPNE1-219ENST00000440240 LHX1P48742 406 aa22.29■■□□□ 1.16
CPNE1-219ENST00000440240 TNK2Q07912 1038 aa22.29■■□□□ 1.16
CPNE1-219ENST00000440240 BFSP1Q12934 665 aa22.29■■□□□ 1.16
CPNE1-219ENST00000440240 CCINQ13939 588 aa22.29■■□□□ 1.16
CPNE1-219ENST00000440240 PON2Q15165 354 aa22.29■■□□□ 1.16
CPNE1-219ENST00000440240 LAIR1Q6GTX8 287 aa22.29■■□□□ 1.16
CPNE1-219ENST00000440240 GPD1LQ8N335 351 aa22.29■■□□□ 1.16
CPNE1-219ENST00000440240 TOP6BLQ8N6T0 577 aa22.29■■□□□ 1.16
CPNE1-219ENST00000440240 PDILTQ8N807 584 aa22.29■■□□□ 1.16
CPNE1-219ENST00000440240 CXorf38Q8TB03 319 aa22.29■■□□□ 1.16
CPNE1-219ENST00000440240 NOC3LQ8WTT2 800 aaKnown RBP22.29■■□□□ 1.16
CPNE1-219ENST00000440240 SMG9Q9H0W8 520 aaKnown RBP22.29■■□□□ 1.16
CPNE1-219ENST00000440240 PCIF1Q9H4Z3 704 aa22.29■■□□□ 1.16
CPNE1-219ENST00000440240 KIF9Q9HAQ2 790 aa22.29■■□□□ 1.16
CPNE1-219ENST00000440240 PDE11AQ9HCR9 933 aa22.29■■□□□ 1.16
CPNE1-219ENST00000440240 TDP1Q9NUW8 608 aa22.29■■□□□ 1.16
CPNE1-219ENST00000440240 MAGED2Q9UNF1 606 aaPredicted RBP22.29■■□□□ 1.16
CPNE1-219ENST00000440240 SNX9Q9Y5X1 595 aa22.29■■□□□ 1.16
CPNE1-219ENST00000440240 TSC2P49815 1807 aa22.29■■□□□ 1.16
CPNE1-219ENST00000440240 STX6O43752 255 aa22.28■■□□□ 1.16
CPNE1-219ENST00000440240 TMEM191BP0C7N4 346 aa22.28■■□□□ 1.16
CPNE1-219ENST00000440240 PCSK1P29120 753 aa22.28■■□□□ 1.16
CPNE1-219ENST00000440240 NASPP49321 788 aaPredicted RBP22.28■■□□□ 1.16
CPNE1-219ENST00000440240 AMPD2Q01433 879 aa22.28■■□□□ 1.16
CPNE1-219ENST00000440240 MYO1EQ12965 1108 aa22.28■■□□□ 1.16
CPNE1-219ENST00000440240 SURF1Q15526 300 aa22.28■■□□□ 1.16
CPNE1-219ENST00000440240 INTS6LQ5JSJ4 861 aaKnown RBP22.28■■□□□ 1.16
CPNE1-219ENST00000440240 DPH6Q7L8W6 267 aa22.28■■□□□ 1.16
CPNE1-219ENST00000440240 MON1AQ86VX9 555 aa22.28■■□□□ 1.16
CPNE1-219ENST00000440240 LONP2Q86WA8 852 aa22.28■■□□□ 1.16
CPNE1-219ENST00000440240 ANKRD36BP1Q96IX9 119 aa22.28■■□□□ 1.16
CPNE1-219ENST00000440240 FAM83CQ9BQN1 747 aa22.28■■□□□ 1.16
CPNE1-219ENST00000440240 GTF3C4Q9UKN8 822 aa22.28■■□□□ 1.16
CPNE1-219ENST00000440240 USP18Q9UMW8 372 aa22.28■■□□□ 1.16
CPNE1-219ENST00000440240 ZNF233A6NK53 670 aa22.27■■□□□ 1.16
CPNE1-219ENST00000440240 GABRDO14764 452 aa22.27■■□□□ 1.16
CPNE1-219ENST00000440240 RETP07949 1114 aa22.27■■□□□ 1.16
CPNE1-219ENST00000440240 HOXA6P31267 233 aa22.27■■□□□ 1.16
CPNE1-219ENST00000440240 AMPD3Q01432 767 aa22.27■■□□□ 1.16
CPNE1-219ENST00000440240 RUNX3Q13761 415 aa22.27■■□□□ 1.16
CPNE1-219ENST00000440240 SIM2Q14190 667 aaPredicted RBP22.27■■□□□ 1.16
CPNE1-219ENST00000440240 STK38Q15208 465 aa22.27■■□□□ 1.16
CPNE1-219ENST00000440240 DDR2Q16832 855 aa22.27■■□□□ 1.16
CPNE1-219ENST00000440240 WDR44Q5JSH3 913 aa22.27■■□□□ 1.16
CPNE1-219ENST00000440240 TXNDC8Q6A555 127 aa22.27■■□□□ 1.16
CPNE1-219ENST00000440240 CC2D1AQ6P1N0 951 aaPredicted RBP22.27■■□□□ 1.16
CPNE1-219ENST00000440240 PRR23BQ6ZRT6 265 aa22.27■■□□□ 1.16
CPNE1-219ENST00000440240 Q6ZS52 159 aa22.27■■□□□ 1.16
CPNE1-219ENST00000440240 USP13Q92995 863 aaPredicted RBP22.27■■□□□ 1.16
CPNE1-219ENST00000440240 TRMT2BQ96GJ1 504 aaKnown RBP22.27■■□□□ 1.16
CPNE1-219ENST00000440240 MYRFLQ96LU7 910 aa22.27■■□□□ 1.16
CPNE1-219ENST00000440240 FGFBP2Q9BYJ0 223 aa22.27■■□□□ 1.16
CPNE1-219ENST00000440240 TNMDQ9H2S6 317 aa22.27■■□□□ 1.16
CPNE1-219ENST00000440240 CUEDC2Q9H467 287 aa22.27■■□□□ 1.16
CPNE1-219ENST00000440240 INTS13Q9NVM9 706 aa22.27■■□□□ 1.16
CPNE1-219ENST00000440240 TCHHQ07283 1943 aa22.27■■□□□ 1.16
CPNE1-219ENST00000440240 NUP210Q8TEM1 1887 aaPredicted RBP22.26■■□□□ 1.15
CPNE1-219ENST00000440240 CHURC1-FNTBB4DL54 471 aa22.26■■□□□ 1.15
CPNE1-219ENST00000440240 K7ESF4 209 aa22.26■■□□□ 1.15
CPNE1-219ENST00000440240 TGM1P22735 817 aa22.26■■□□□ 1.15
CPNE1-219ENST00000440240 ACAT1P24752 427 aaKnown RBP22.26■■□□□ 1.15
CPNE1-219ENST00000440240 CYP2F1P24903 491 aa22.26■■□□□ 1.15
CPNE1-219ENST00000440240 FNTBP49356 437 aa22.26■■□□□ 1.15
CPNE1-219ENST00000440240 GPR15P49685 360 aa22.26■■□□□ 1.15
CPNE1-219ENST00000440240 DUOXA2Q1HG44 320 aa22.26■■□□□ 1.15
CPNE1-219ENST00000440240 CFAP221Q4G0U5 840 aa22.26■■□□□ 1.15
CPNE1-219ENST00000440240 SPATA2LQ8IUW3 424 aaPredicted RBP22.26■■□□□ 1.15
CPNE1-219ENST00000440240 ADGRF2Q8IZF7 708 aa22.26■■□□□ 1.15
CPNE1-219ENST00000440240 LINC00301Q8NCQ3 95 aa22.26■■□□□ 1.15
CPNE1-219ENST00000440240 FUBP3Q96I24 572 aaKnown RBP eCLIP22.26■■□□□ 1.15
CPNE1-219ENST00000440240 PKMYT1Q99640 499 aa22.26■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms