RNA–Protein interactions for RNA: ENST00000312196.8

MSL3-201, Transcript of MSL complex subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSL3, Length 2,345 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSL3-201ENST00000312196 FOXQ1Q9C009 403 aa9.06□□□□□ -0.96
MSL3-201ENST00000312196 DMAC2Q9NW81 257 aa9.06□□□□□ -0.96
MSL3-201ENST00000312196 THG1LQ9NWX6 298 aaKnown RBP9.06□□□□□ -0.96
MSL3-201ENST00000312196 POLIQ9UNA4 740 aa9.06□□□□□ -0.96
MSL3-201ENST00000312196 SLFN14P0C7P3 912 aa9.05□□□□□ -0.96
MSL3-201ENST00000312196 MYL4P12829 197 aa9.05□□□□□ -0.96
MSL3-201ENST00000312196 CMA1P23946 247 aa9.05□□□□□ -0.96
MSL3-201ENST00000312196 HOXD13P35453 343 aa9.05□□□□□ -0.96
MSL3-201ENST00000312196 ARPP19P56211 112 aa9.05□□□□□ -0.96
MSL3-201ENST00000312196 CSTF1Q05048 431 aaKnown RBP9.05□□□□□ -0.96
MSL3-201ENST00000312196 PDGFRLQ15198 375 aa9.05□□□□□ -0.96
MSL3-201ENST00000312196 TEAD2Q15562 447 aa9.05□□□□□ -0.96
MSL3-201ENST00000312196 TPRG1Q6ZUI0 275 aa9.05□□□□□ -0.96
MSL3-201ENST00000312196 MON1AQ86VX9 555 aa9.05□□□□□ -0.96
MSL3-201ENST00000312196 ZSCAN18Q8TBC5 510 aaPredicted RBP9.05□□□□□ -0.96
MSL3-201ENST00000312196 OVCA2Q8WZ82 227 aa9.05□□□□□ -0.96
MSL3-201ENST00000312196 TTLL2Q9BWV7 592 aa9.05□□□□□ -0.96
MSL3-201ENST00000312196 CRISPLD1Q9H336 500 aa9.05□□□□□ -0.96
MSL3-201ENST00000312196 BRD9Q9H8M2 597 aa9.05□□□□□ -0.96
MSL3-201ENST00000312196 SIX4Q9UIU6 781 aa9.05□□□□□ -0.96
MSL3-201ENST00000312196 RAB23Q9ULC3 237 aa9.05□□□□□ -0.96
MSL3-201ENST00000312196 CACNA1HO95180 2353 aa9.05□□□□□ -0.96
MSL3-201ENST00000312196 ZDBF2Q9HCK1 2354 aa9.05□□□□□ -0.96
MSL3-201ENST00000312196 OBSL1O75147 1896 aa9.05□□□□□ -0.96
MSL3-201ENST00000312196 HEPACAM2A8MVW5 462 aa9.05□□□□□ -0.96
MSL3-201ENST00000312196 KIF20AO95235 890 aa9.05□□□□□ -0.96
MSL3-201ENST00000312196 HMGA1P17096 107 aaKnown RBP9.05□□□□□ -0.96
MSL3-201ENST00000312196 GUCY2FP51841 1108 aa9.05□□□□□ -0.96
MSL3-201ENST00000312196 CASP5P51878 434 aa9.05□□□□□ -0.96
MSL3-201ENST00000312196 NLRP12P59046 1061 aa9.05□□□□□ -0.96
MSL3-201ENST00000312196 SNW1Q13573 536 aaKnown RBP9.05□□□□□ -0.96
MSL3-201ENST00000312196 RSPO4Q2I0M5 234 aaPredicted RBP9.05□□□□□ -0.96
MSL3-201ENST00000312196 WSCD1Q658N2 575 aa9.05□□□□□ -0.96
MSL3-201ENST00000312196 C4orf50Q6ZRC1 276 aa9.05□□□□□ -0.96
MSL3-201ENST00000312196 LONP2Q86WA8 852 aa9.05□□□□□ -0.96
MSL3-201ENST00000312196 TMC2Q8TDI7 906 aa9.05□□□□□ -0.96
MSL3-201ENST00000312196 C8orf48Q96LL4 319 aa9.05□□□□□ -0.96
MSL3-201ENST00000312196 AGPAT3Q9NRZ7 376 aa9.05□□□□□ -0.96
MSL3-201ENST00000312196 HSPBP1Q9NZL4 362 aa9.05□□□□□ -0.96
MSL3-201ENST00000312196 AGAP1Q9UPQ3 857 aa9.05□□□□□ -0.96
MSL3-201ENST00000312196 HPSEQ9Y251 543 aa9.05□□□□□ -0.96
MSL3-201ENST00000312196 A0A1W2PQ27 194 aa9.04□□□□□ -0.96
MSL3-201ENST00000312196 A0A1W2PQ64 194 aa9.04□□□□□ -0.96
MSL3-201ENST00000312196 A0A1W2PQD8 194 aa9.04□□□□□ -0.96
MSL3-201ENST00000312196 TGFB1I1O43294 461 aa9.04□□□□□ -0.96
MSL3-201ENST00000312196 RPN1P04843 607 aaKnown RBP9.04□□□□□ -0.96
MSL3-201ENST00000312196 IDEP14735 1019 aa9.04□□□□□ -0.96
MSL3-201ENST00000312196 ATF6P18850 670 aa9.04□□□□□ -0.96
MSL3-201ENST00000312196 POLR2BP30876 1174 aaKnown RBP9.04□□□□□ -0.96
MSL3-201ENST00000312196 SCN1AP35498 2009 aa9.04□□□□□ -0.96
MSL3-201ENST00000312196 AMPD2Q01433 879 aa9.04□□□□□ -0.96
MSL3-201ENST00000312196 SPAG1Q07617 926 aa9.04□□□□□ -0.96
MSL3-201ENST00000312196 CYP24A1Q07973 514 aa9.04□□□□□ -0.96
MSL3-201ENST00000312196 UBXN2BQ14CS0 331 aa9.04□□□□□ -0.96
MSL3-201ENST00000312196 CSRP2Q16527 193 aa9.04□□□□□ -0.96
MSL3-201ENST00000312196 SLC39A12Q504Y0 691 aa9.04□□□□□ -0.96
MSL3-201ENST00000312196 SPECC1Q5M775 1068 aa9.04□□□□□ -0.96
MSL3-201ENST00000312196 GAREM2Q75VX8 874 aa9.04□□□□□ -0.96
MSL3-201ENST00000312196 HS2ST1Q7LGA3 356 aa9.04□□□□□ -0.96
MSL3-201ENST00000312196 YAF2Q8IY57 180 aa9.04□□□□□ -0.96
MSL3-201ENST00000312196 XXYLT1Q8NBI6 393 aa9.04□□□□□ -0.96
MSL3-201ENST00000312196 CCDC26Q8TAB7 109 aa9.04□□□□□ -0.96
MSL3-201ENST00000312196 CSGALNACT1Q8TDX6 532 aa9.04□□□□□ -0.96
MSL3-201ENST00000312196 CBWD1Q9BRT8 395 aa9.04□□□□□ -0.96
MSL3-201ENST00000312196 PCDHA7Q9UN72 937 aa9.04□□□□□ -0.96
MSL3-201ENST00000312196 L1RE1Q9UN81 338 aa9.04□□□□□ -0.96
MSL3-201ENST00000312196 CHURC1-FNTBB4DL54 471 aa9.04□□□□□ -0.96
MSL3-201ENST00000312196 PDXKO00764 312 aa9.04□□□□□ -0.96
MSL3-201ENST00000312196 PRPF6O94906 941 aaKnown RBP9.04□□□□□ -0.96
MSL3-201ENST00000312196 TMEM191BP0C7N4 346 aa9.04□□□□□ -0.96
MSL3-201ENST00000312196 CHRNB1P11230 501 aa9.04□□□□□ -0.96
MSL3-201ENST00000312196 ATXN1P54253 815 aaKnown RBP9.04□□□□□ -0.96
MSL3-201ENST00000312196 ASIC1P78348 528 aa9.04□□□□□ -0.96
MSL3-201ENST00000312196 BFSP1Q12934 665 aa9.04□□□□□ -0.96
MSL3-201ENST00000312196 KNOP1Q1ED39 458 aaKnown RBP9.04□□□□□ -0.96
MSL3-201ENST00000312196 COBLL1Q53SF7 1204 aa9.04□□□□□ -0.96
MSL3-201ENST00000312196 LRRTM3Q86VH5 581 aa9.04□□□□□ -0.96
MSL3-201ENST00000312196 KIAA2013Q8IYS2 634 aa9.04□□□□□ -0.96
MSL3-201ENST00000312196 SCFD1Q8WVM8 642 aa9.04□□□□□ -0.96
MSL3-201ENST00000312196 ING5Q8WYH8 240 aa9.04□□□□□ -0.96
MSL3-201ENST00000312196 FAM3CQ92520 227 aa9.04□□□□□ -0.96
MSL3-201ENST00000312196 FAM212AQ96EL1 285 aa9.04□□□□□ -0.96
MSL3-201ENST00000312196 ZSWIM3Q96MP5 696 aa9.04□□□□□ -0.96
MSL3-201ENST00000312196 PCDHGA5Q9Y5G8 931 aa9.04□□□□□ -0.96
MSL3-201ENST00000312196 ATP6V1DQ9Y5K8 247 aa9.04□□□□□ -0.96
MSL3-201ENST00000312196 PTPRDP23468 1912 aa9.04□□□□□ -0.96
MSL3-201ENST00000312196 ATP8B3O60423 1300 aa9.03□□□□□ -0.96
MSL3-201ENST00000312196 MED19A0JLT2 244 aaPredicted RBP9.03□□□□□ -0.96
MSL3-201ENST00000312196 TISP43B9A030 160 aa9.03□□□□□ -0.96
MSL3-201ENST00000312196 TRIM66O15016 1216 aa9.03□□□□□ -0.96
MSL3-201ENST00000312196 ACTN4O43707 911 aaKnown RBP9.03□□□□□ -0.96
MSL3-201ENST00000312196 KLRC4O43908 158 aa9.03□□□□□ -0.96
MSL3-201ENST00000312196 ITGB3P05106 788 aa9.03□□□□□ -0.96
MSL3-201ENST00000312196 TFAMQ00059 246 aaKnown RBP9.03□□□□□ -0.96
MSL3-201ENST00000312196 KCNA1Q09470 495 aa9.03□□□□□ -0.96
MSL3-201ENST00000312196 USP4Q13107 963 aa9.03□□□□□ -0.96
MSL3-201ENST00000312196 GPR158Q5T848 1215 aa9.03□□□□□ -0.96
MSL3-201ENST00000312196 FAM173BQ6P4H8 233 aa9.03□□□□□ -0.96
MSL3-201ENST00000312196 C11orf74Q86VG3 221 aa9.03□□□□□ -0.96
MSL3-201ENST00000312196 ELOA2Q8IYF1 753 aaPredicted RBP9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms