RNA–Protein interactions for RNA: snR53

snR53, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR53, Length 91 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR53snR53 TY4B-HP0C2J7 1802 aa-4.13□□□□□ -3.07
snR53snR53 CCW14O13547 238 aa-4.13□□□□□ -3.07
snR53snR53 IPT1P38954 527 aa-4.13□□□□□ -3.07
snR53snR53 LIA1P47120 325 aaKnown RBP-4.13□□□□□ -3.07
snR53snR53 LSM7P53905 115 aaKnown RBP-4.13□□□□□ -3.07
snR53snR53 FYV6P53913 173 aa-4.13□□□□□ -3.07
snR53snR53 POL30P15873 258 aaKnown RBP-4.14□□□□□ -3.07
snR53snR53 COQ1P18900 473 aa-4.14□□□□□ -3.07
snR53snR53 YFL019CP43576 117 aa-4.14□□□□□ -3.07
snR53snR53 COA4Q05809 96 aa-4.14□□□□□ -3.07
snR53snR53 SEN1Q00416 2231 aaKnown RBP-4.14□□□□□ -3.07
snR53snR53 PMD1P32634 1753 aa-4.15□□□□□ -3.07
snR53snR53 YLR036CQ07986 203 aa-4.16□□□□□ -3.08
snR53snR53 SPS2P08459 502 aa-4.17□□□□□ -3.08
snR53snR53 BRR6P53062 197 aa-4.17□□□□□ -3.08
snR53snR53 EST3Q03096 181 aa-4.17□□□□□ -3.08
snR53snR53 MGR3Q04472 501 aa-4.17□□□□□ -3.08
snR53snR53 YOR385WQ08909 290 aa-4.17□□□□□ -3.08
snR53snR53 KTI11Q3E840 82 aa-4.17□□□□□ -3.08
snR53snR53 YBR016WP38216 128 aa-4.18□□□□□ -3.08
snR53snR53 RTT105P40063 208 aa-4.18□□□□□ -3.08
snR53snR53 FUS2Q05670 677 aa-4.18□□□□□ -3.08
snR53snR53 PGC1Q08959 321 aa-4.18□□□□□ -3.08
snR53snR53 RPS24AP0CX31 135 aaKnown RBP-4.19□□□□□ -3.08
snR53snR53 RPS24BP0CX32 135 aaKnown RBP-4.19□□□□□ -3.08
snR53snR53 PAC10P48363 199 aa-4.19□□□□□ -3.08
snR53snR53 NRK1P53915 240 aa-4.19□□□□□ -3.08
snR53snR53 YDL241WQ07738 123 aa-4.19□□□□□ -3.08
snR53snR53 GCN3P14741 305 aa-4.2□□□□□ -3.08
snR53snR53 HSP30P25619 332 aa-4.2□□□□□ -3.08
snR53snR53 MRPL11P36521 249 aaPredicted RBP-4.2□□□□□ -3.08
snR53snR53 LST8P41318 303 aa-4.2□□□□□ -3.08
snR53snR53 TEL1P38110 2787 aa-4.2□□□□□ -3.08
snR53snR53 CNB1P25296 175 aa-4.21□□□□□ -3.08
snR53snR53 RUD3Q12234 484 aaKnown RBP-4.21□□□□□ -3.08
snR53snR53 EMP24P32803 203 aaKnown RBP-4.22□□□□□ -3.08
snR53snR53 TAF14P35189 244 aa-4.22□□□□□ -3.08
snR53snR53 MDM32Q12171 622 aa-4.22□□□□□ -3.08
snR53snR53 YFR009W-AP0C5M9 85 aa-4.23□□□□□ -3.09
snR53snR53 MRPL25P23369 157 aa-4.23□□□□□ -3.09
snR53snR53 SRX1P36077 127 aa-4.23□□□□□ -3.09
snR53snR53 CSH1P38287 376 aa-4.23□□□□□ -3.09
snR53snR53 YCR108CQ3E819 63 aa-4.23□□□□□ -3.09
snR53snR53 MBF1O14467 151 aaKnown RBP-4.24□□□□□ -3.09
snR53snR53 FUN14P18411 198 aa-4.24□□□□□ -3.09
snR53snR53 TDA4P47153 279 aa-4.24□□□□□ -3.09
snR53snR53 COX15P40086 486 aa-4.25□□□□□ -3.09
snR53snR53 LCL1Q02786 101 aa-4.25□□□□□ -3.09
snR53snR53 YMR315WQ04869 349 aaKnown RBP-4.25□□□□□ -3.09
snR53snR53 APA2P22108 325 aa-4.27□□□□□ -3.09
snR53snR53 VPS28Q02767 242 aa-4.27□□□□□ -3.09
snR53snR53 GPI11Q06636 219 aa-4.27□□□□□ -3.09
snR53snR53 INO4P13902 151 aa-4.28□□□□□ -3.09
snR53snR53 MER1P16523 270 aa-4.28□□□□□ -3.09
snR53snR53 YPT31P38555 223 aaKnown RBP-4.28□□□□□ -3.09
snR53snR53 YEL073CP39974 107 aa-4.28□□□□□ -3.09
snR53snR53 RCF1Q03713 159 aa-4.28□□□□□ -3.09
snR53snR53 MDN1Q12019 4910 aaKnown RBP-4.29□□□□□ -3.1
snR53snR53 MDY2Q12285 212 aa-4.29□□□□□ -3.1
snR53snR53 TOR1P35169 2470 aa-4.3□□□□□ -3.1
snR53snR53 YLR031WQ07978 186 aa-4.3□□□□□ -3.1
snR53snR53 YSF3P0C074 85 aaPredicted RBP-4.31□□□□□ -3.1
snR53snR53 SEC14P24280 304 aaKnown RBP-4.31□□□□□ -3.1
snR53snR53 SSO1P32867 290 aa-4.31□□□□□ -3.1
snR53snR53 AIM4P38305 123 aaPredicted RBP-4.31□□□□□ -3.1
snR53snR53 TRM5P38793 499 aa-4.31□□□□□ -3.1
snR53snR53 EMC2P47133 292 aaKnown RBP-4.31□□□□□ -3.1
snR53snR53 NQM1P53228 333 aaPredicted RBP-4.31□□□□□ -3.1
snR53snR53 SYM1Q06563 197 aa-4.31□□□□□ -3.1
snR53snR53 UIP4Q08926 304 aa-4.31□□□□□ -3.1
snR53snR53 YLR412C-AQ3E742 68 aa-4.31□□□□□ -3.1
snR53snR53 MHF1Q3E835 90 aa-4.31□□□□□ -3.1
snR53snR53 MRS1P07266 363 aa-4.32□□□□□ -3.1
snR53snR53 TMA22P47089 198 aaPredicted RBP-4.32□□□□□ -3.1
snR53snR53 COF1Q03048 143 aaKnown RBP-4.32□□□□□ -3.1
snR53snR53 KRE28Q04431 385 aa-4.32□□□□□ -3.1
snR53snR53 MIC26P50087 233 aa-4.33□□□□□ -3.1
snR53snR53 ADE6P38972 1358 aaKnown RBP-4.33□□□□□ -3.1
snR53snR53 TRX1P22217 103 aaKnown RBP-4.34□□□□□ -3.1
snR53snR53 RPC17P47076 161 aa-4.34□□□□□ -3.1
snR53snR53 NMT1P14743 455 aa-4.35□□□□□ -3.11
snR53snR53 FYV4P38783 130 aaPredicted RBP-4.35□□□□□ -3.11
snR53snR53 YNL019CP53975 284 aa-4.35□□□□□ -3.11
snR53snR53 YIL002W-AQ3E7Z5 69 aa-4.35□□□□□ -3.11
snR53snR53 RPO26P20435 155 aa-4.36□□□□□ -3.11
snR53snR53 CPR5P35176 225 aa-4.36□□□□□ -3.11
snR53snR53 RPS29AP41057 56 aaKnown RBP-4.36□□□□□ -3.11
snR53snR53 RIM15P43565 1770 aa-4.36□□□□□ -3.11
snR53snR53 RPL28P02406 149 aaKnown RBP-4.37□□□□□ -3.11
snR53snR53 RAD6P06104 172 aa-4.37□□□□□ -3.11
snR53snR53 YGL041W-AP0C5N3 154 aa-4.37□□□□□ -3.11
snR53snR53 YHR213WP0CI67 198 aa-4.37□□□□□ -3.11
snR53snR53 PRP18P33411 251 aaPredicted RBP-4.37□□□□□ -3.11
snR53snR53 FMP23P38231 175 aa-4.37□□□□□ -3.11
snR53snR53 YGL101WP53144 215 aa-4.37□□□□□ -3.11
snR53snR53 HOP2P53187 214 aa-4.37□□□□□ -3.11
snR53snR53 YGR164WP53291 111 aa-4.37□□□□□ -3.11
snR53snR53 THI74Q04083 370 aa-4.37□□□□□ -3.11
snR53snR53 RPO41P13433 1351 aaKnown RBP-4.38□□□□□ -3.11
snR53snR53 NHP6AP11632 93 aaKnown RBP-4.38□□□□□ -3.11
Retrieved 100 of 5,963 RNA–protein pairs in 109.3 ms