RNA–Protein interactions for RNA: YPR135W

CTF4, Transcript of Chromatin-associated protein, yeastyeast

Gene CTF4, Length 2,784 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CTF4YPR135W SHH4Q06236 168 aa1.22□□□□□ -2.21
CTF4YPR135W YLR031WQ07978 186 aa1.22□□□□□ -2.21
CTF4YPR135W YLR361C-AQ3E795 98 aa1.22□□□□□ -2.21
CTF4YPR135W YAL067W-AQ8TGK6 75 aa1.22□□□□□ -2.21
CTF4YPR135W MBF1O14467 151 aaKnown RBP1.22□□□□□ -2.21
CTF4YPR135W RPL25P04456 142 aaKnown RBP1.22□□□□□ -2.21
CTF4YPR135W RPL2AP0CX45 254 aaKnown RBP1.22□□□□□ -2.21
CTF4YPR135W RPL2BP0CX46 254 aaKnown RBP1.22□□□□□ -2.21
CTF4YPR135W PRE7P23724 241 aaKnown RBP1.22□□□□□ -2.21
CTF4YPR135W CLB6P32943 380 aa1.22□□□□□ -2.21
CTF4YPR135W GPI18P38211 433 aa1.22□□□□□ -2.21
CTF4YPR135W PHO89P38361 574 aa1.22□□□□□ -2.21
CTF4YPR135W GLE2P40066 365 aa1.22□□□□□ -2.21
CTF4YPR135W YGL262WP53054 175 aa1.22□□□□□ -2.21
CTF4YPR135W ARO8P53090 500 aaKnown RBP1.22□□□□□ -2.21
CTF4YPR135W DID2P69771 204 aa1.22□□□□□ -2.21
CTF4YPR135W LPP1Q04396 274 aa1.22□□□□□ -2.21
CTF4YPR135W DGA1Q08650 418 aa1.22□□□□□ -2.21
CTF4YPR135W TDA8Q6B2U8 126 aa1.22□□□□□ -2.21
CTF4YPR135W CMD1P06787 147 aaKnown RBP1.21□□□□□ -2.22
CTF4YPR135W COX10P21592 462 aa1.21□□□□□ -2.22
CTF4YPR135W MRPS28P21771 286 aa1.21□□□□□ -2.22
CTF4YPR135W IDP1P21954 428 aaKnown RBP1.21□□□□□ -2.22
CTF4YPR135W CPR5P35176 225 aa1.21□□□□□ -2.22
CTF4YPR135W YOR062CP36025 268 aa1.21□□□□□ -2.22
CTF4YPR135W RPF1P38805 295 aaKnown RBP1.21□□□□□ -2.22
CTF4YPR135W GAT4P40569 121 aa1.21□□□□□ -2.22
CTF4YPR135W GLC8P41818 229 aa1.21□□□□□ -2.22
CTF4YPR135W BOR1P53838 576 aa1.21□□□□□ -2.22
CTF4YPR135W TMA20P89886 181 aaPredicted RBP1.21□□□□□ -2.22
CTF4YPR135W YDL085C-AQ3E7B7 68 aaKnown RBP1.21□□□□□ -2.22
CTF4YPR135W TIM9O74700 87 aa1.21□□□□□ -2.22
CTF4YPR135W SNF4P12904 322 aa1.21□□□□□ -2.22
CTF4YPR135W FCY2P17064 533 aa1.21□□□□□ -2.22
CTF4YPR135W YEL045CP32616 141 aa1.21□□□□□ -2.22
CTF4YPR135W MRPL27P36526 146 aaPredicted RBP1.21□□□□□ -2.22
CTF4YPR135W CTR2P38865 189 aa1.21□□□□□ -2.22
CTF4YPR135W IGD1P43598 195 aa1.21□□□□□ -2.22
CTF4YPR135W RPS12P48589 143 aaKnown RBP1.21□□□□□ -2.22
CTF4YPR135W DYN2Q02647 92 aa1.21□□□□□ -2.22
CTF4YPR135W HPT1Q04178 221 aaKnown RBP1.21□□□□□ -2.22
CTF4YPR135W YPL162CQ12042 273 aa1.21□□□□□ -2.22
CTF4YPR135W MCP1Q12106 302 aa1.21□□□□□ -2.22
CTF4YPR135W ATO3Q12359 275 aa1.21□□□□□ -2.22
CTF4YPR135W WIP1Q2V2P8 89 aa1.21□□□□□ -2.22
CTF4YPR135W SGA1P08019 549 aa1.2□□□□□ -2.22
CTF4YPR135W MAG1P22134 296 aaKnown RBP1.2□□□□□ -2.22
CTF4YPR135W BUB2P26448 306 aaPredicted RBP1.2□□□□□ -2.22
CTF4YPR135W SDH4P37298 181 aa1.2□□□□□ -2.22
CTF4YPR135W ECM34P38728 170 aa1.2□□□□□ -2.22
CTF4YPR135W RRT13P40042 185 aa1.2□□□□□ -2.22
CTF4YPR135W YER137CP40083 148 aaKnown RBP1.2□□□□□ -2.22
CTF4YPR135W SNX4P47057 423 aa1.2□□□□□ -2.22
CTF4YPR135W YGL118CP53132 145 aa1.2□□□□□ -2.22
CTF4YPR135W PGA1P53896 198 aa1.2□□□□□ -2.22
CTF4YPR135W CSN9Q03981 162 aa1.2□□□□□ -2.22
CTF4YPR135W HRD1Q08109 551 aa1.2□□□□□ -2.22
CTF4YPR135W FIT3Q08907 204 aa1.2□□□□□ -2.22
CTF4YPR135W DAS2Q12084 232 aa1.2□□□□□ -2.22
CTF4YPR135W MPD1Q12404 318 aaKnown RBP1.2□□□□□ -2.22
CTF4YPR135W YLR462WO13556 202 aa1.2□□□□□ -2.22
CTF4YPR135W Q0255P03881 472 aa1.2□□□□□ -2.22
CTF4YPR135W CKS1P20486 150 aaKnown RBP1.2□□□□□ -2.22
CTF4YPR135W ATP15P21306 62 aa1.2□□□□□ -2.22
CTF4YPR135W SPO13P23624 291 aa1.2□□□□□ -2.22
CTF4YPR135W ATG22P25568 528 aa1.2□□□□□ -2.22
CTF4YPR135W SKI6P46948 246 aaPredicted RBP1.2□□□□□ -2.22
CTF4YPR135W YJR015WP47090 510 aa1.2□□□□□ -2.22
CTF4YPR135W YGL101WP53144 215 aa1.2□□□□□ -2.22
CTF4YPR135W GEP7P53171 287 aa1.2□□□□□ -2.22
CTF4YPR135W YNR064CP53750 290 aa1.2□□□□□ -2.22
CTF4YPR135W PKR1Q03880 122 aaKnown RBP1.2□□□□□ -2.22
CTF4YPR135W THI74Q04083 370 aa1.2□□□□□ -2.22
CTF4YPR135W YPL257WQ08974 193 aa1.2□□□□□ -2.22
CTF4YPR135W SMT3Q12306 101 aaKnown RBP1.2□□□□□ -2.22
CTF4YPR135W HTL1Q9URQ5 78 aa1.2□□□□□ -2.22
CTF4YPR135W ADH1P00330 348 aaKnown RBP1.19□□□□□ -2.22
CTF4YPR135W REP2P03872 296 aa1.19□□□□□ -2.22
CTF4YPR135W YJL197C-AP0C5P0 93 aa1.19□□□□□ -2.22
CTF4YPR135W YPR170W-BP0C5R9 85 aa1.19□□□□□ -2.22
CTF4YPR135W YBR285WP38354 144 aa1.19□□□□□ -2.22
CTF4YPR135W ASP1P38986 381 aaPredicted RBP1.19□□□□□ -2.22
CTF4YPR135W RMD6P39975 231 aa1.19□□□□□ -2.22
CTF4YPR135W SMD3P43321 101 aaKnown RBP1.19□□□□□ -2.22
CTF4YPR135W GPI14P47088 403 aaKnown RBP1.19□□□□□ -2.22
CTF4YPR135W ILM1P47155 203 aa1.19□□□□□ -2.22
CTF4YPR135W RBL2P48606 106 aaKnown RBP1.19□□□□□ -2.22
CTF4YPR135W CAB4P53332 305 aa1.19□□□□□ -2.22
CTF4YPR135W NHP10Q03435 203 aa1.19□□□□□ -2.22
CTF4YPR135W BBP1Q12365 385 aa1.19□□□□□ -2.22
CTF4YPR135W YLR156WP0CE96 114 aa1.19□□□□□ -2.22
CTF4YPR135W YLR159WP0CE97 114 aa1.19□□□□□ -2.22
CTF4YPR135W YLR161WP0CE98 114 aa1.19□□□□□ -2.22
CTF4YPR135W RPL30P14120 105 aaKnown RBP1.19□□□□□ -2.22
CTF4YPR135W RPB3P16370 318 aaKnown RBP1.19□□□□□ -2.22
CTF4YPR135W YBR063CP38083 404 aa1.19□□□□□ -2.22
CTF4YPR135W VMA22P38784 181 aa1.19□□□□□ -2.22
CTF4YPR135W TEM1P38987 245 aa1.19□□□□□ -2.22
CTF4YPR135W YEA4P40004 342 aa1.19□□□□□ -2.22
CTF4YPR135W YNL200CP40165 246 aaKnown RBP1.19□□□□□ -2.22
Retrieved 100 of 5,963 RNA–protein pairs in 22.5 ms