RNA–Protein interactions for RNA: YPR088C

SRP54, Transcript of Signal recognition particle (SRP) subunit (homolog of mammalian SRP54), yeastyeast

Gene SRP54, Length 1,626 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SRP54YPR088C YOR352WQ08816 343 aa6.68□□□□□ -1.34
SRP54YPR088C MIA40P36046 403 aa6.67□□□□□ -1.34
SRP54YPR088C RRT1P38192 103 aa6.67□□□□□ -1.34
SRP54YPR088C PGD1P40356 397 aa6.67□□□□□ -1.34
SRP54YPR088C DSK2P48510 373 aa6.67□□□□□ -1.34
SRP54YPR088C TIM21P53220 239 aa6.67□□□□□ -1.34
SRP54YPR088C PBP4Q07362 185 aaKnown RBP6.67□□□□□ -1.34
SRP54YPR088C SRL1Q08673 210 aa6.67□□□□□ -1.34
SRP54YPR088C CDC7P06243 507 aa6.66□□□□□ -1.34
SRP54YPR088C ADH3P07246 375 aaKnown RBP6.66□□□□□ -1.34
SRP54YPR088C LAC1P28496 418 aa6.66□□□□□ -1.34
SRP54YPR088C YPS1P32329 569 aa6.66□□□□□ -1.34
SRP54YPR088C MRPL4P36517 319 aa6.66□□□□□ -1.34
SRP54YPR088C PRS4P38063 326 aaPredicted RBP6.66□□□□□ -1.34
SRP54YPR088C PET100P38958 111 aa6.66□□□□□ -1.34
SRP54YPR088C YER188WP40103 239 aa6.66□□□□□ -1.34
SRP54YPR088C ATG27P46989 271 aa6.66□□□□□ -1.34
SRP54YPR088C BNS1P50084 137 aa6.66□□□□□ -1.34
SRP54YPR088C HHO1P53551 258 aa6.66□□□□□ -1.34
SRP54YPR088C TRS20P38334 175 aa6.65□□□□□ -1.34
SRP54YPR088C TIF11P38912 153 aaKnown RBP6.65□□□□□ -1.34
SRP54YPR088C LOA1Q06508 300 aa6.65□□□□□ -1.34
SRP54YPR088C IRC23Q08416 157 aa6.65□□□□□ -1.34
SRP54YPR088C YPR145C-AQ2V2P0 78 aa6.65□□□□□ -1.34
SRP54YPR088C RPS22AP0C0W1 130 aaKnown RBP6.65□□□□□ -1.35
SRP54YPR088C TY1A-LR4P0C2I8 440 aaKnown RBP6.65□□□□□ -1.35
SRP54YPR088C TY1A-DR6P0CX70 440 aa6.65□□□□□ -1.35
SRP54YPR088C TY1A-ER1P0CX71 440 aa6.65□□□□□ -1.35
SRP54YPR088C TY1A-LR2P0CX72 440 aa6.65□□□□□ -1.35
SRP54YPR088C TY1A-PLP0CX73 440 aa6.65□□□□□ -1.35
SRP54YPR088C TY1A-JR1P0CX74 440 aa6.65□□□□□ -1.35
SRP54YPR088C TY1A-LR3P0CX75 440 aa6.65□□□□□ -1.35
SRP54YPR088C TY1A-ML2P0CX76 440 aa6.65□□□□□ -1.35
SRP54YPR088C HSP12P22943 109 aaKnown RBP6.65□□□□□ -1.35
SRP54YPR088C RPS2P25443 254 aaKnown RBP6.65□□□□□ -1.35
SRP54YPR088C HMX1P32339 317 aa6.65□□□□□ -1.35
SRP54YPR088C AFR1P33304 620 aa6.65□□□□□ -1.35
SRP54YPR088C YKL075CP36083 450 aa6.65□□□□□ -1.35
SRP54YPR088C SFT2P38166 215 aa6.65□□□□□ -1.35
SRP54YPR088C ATG8P38182 117 aaRIP-Chip data6.65□□□□□ -1.35not detected
SRP54YPR088C IMD2P38697 523 aaKnown RBP6.65□□□□□ -1.35
SRP54YPR088C YNR071CP53757 342 aa6.65□□□□□ -1.35
SRP54YPR088C SWT21P53873 357 aaPredicted RBP6.65□□□□□ -1.35
SRP54YPR088C LRS4Q04087 347 aaKnown RBP6.65□□□□□ -1.35
SRP54YPR088C TY1A-GR1Q12085 440 aa6.65□□□□□ -1.35
SRP54YPR088C TY1A-PR3Q6Q5H1 440 aaKnown RBP6.65□□□□□ -1.35
SRP54YPR088C TY1A-OLQ92392 440 aaKnown RBP6.65□□□□□ -1.35
SRP54YPR088C RNA15P25299 296 aaPredicted RBP6.64□□□□□ -1.35
SRP54YPR088C INO2P26798 304 aa6.64□□□□□ -1.35
SRP54YPR088C NTF2P33331 125 aaKnown RBP6.64□□□□□ -1.35
SRP54YPR088C MRPS9P38120 278 aa6.64□□□□□ -1.35
SRP54YPR088C HST4P53688 370 aa6.64□□□□□ -1.35
SRP54YPR088C ZEO1Q08245 113 aa6.64□□□□□ -1.35
SRP54YPR088C COQ3P27680 312 aa6.63□□□□□ -1.35
SRP54YPR088C POP5P28005 173 aa6.63□□□□□ -1.35
SRP54YPR088C VMA21P41806 77 aa6.63□□□□□ -1.35
SRP54YPR088C YGR219WP53307 113 aa6.63□□□□□ -1.35
SRP54YPR088C SPG4Q04438 115 aa6.63□□□□□ -1.35
SRP54YPR088C LDS2Q08218 356 aa6.63□□□□□ -1.35
SRP54YPR088C CCW14O13547 238 aa6.62□□□□□ -1.35
SRP54YPR088C PET494P07390 489 aaPredicted RBP6.62□□□□□ -1.35
SRP54YPR088C YHR213WP0CI67 198 aa6.62□□□□□ -1.35
SRP54YPR088C ICS2P38284 255 aa6.62□□□□□ -1.35
SRP54YPR088C CYB5P40312 120 aa6.62□□□□□ -1.35
SRP54YPR088C CPD1P53314 239 aa6.62□□□□□ -1.35
SRP54YPR088C YML122CQ03207 126 aa6.62□□□□□ -1.35
SRP54YPR088C AYT1Q12226 474 aa6.62□□□□□ -1.35
SRP54YPR088C YLR118CQ12354 227 aa6.62□□□□□ -1.35
SRP54YPR088C LSM2P38203 95 aaKnown RBP6.61□□□□□ -1.35
SRP54YPR088C OCA2P53949 197 aa6.61□□□□□ -1.35
SRP54YPR088C MRX11Q03079 207 aa6.61□□□□□ -1.35
SRP54YPR088C CYC3P06182 269 aa6.61□□□□□ -1.35
SRP54YPR088C RPB3P16370 318 aaKnown RBP6.61□□□□□ -1.35
SRP54YPR088C YHR173CP38864 112 aa6.61□□□□□ -1.35
SRP54YPR088C PAU15P40585 124 aa6.61□□□□□ -1.35
SRP54YPR088C VPS55P47111 140 aa6.61□□□□□ -1.35
SRP54YPR088C MOG1P47123 218 aa6.61□□□□□ -1.35
SRP54YPR088C DAN1P47178 298 aa6.61□□□□□ -1.35
SRP54YPR088C DAD3P69850 94 aa6.61□□□□□ -1.35
SRP54YPR088C TIM18Q08749 192 aa6.61□□□□□ -1.35
SRP54YPR088C FIT2Q08906 153 aa6.61□□□□□ -1.35
SRP54YPR088C YOR097CQ12274 175 aaPredicted RBP6.61□□□□□ -1.35
SRP54YPR088C NNK1P36003 928 aa6.6□□□□□ -1.35
SRP54YPR088C MIC12P38341 106 aa6.6□□□□□ -1.35
SRP54YPR088C GPI2P46961 280 aa6.6□□□□□ -1.35
SRP54YPR088C IMP2P46972 177 aa6.6□□□□□ -1.35
SRP54YPR088C YJL027CP47063 138 aaPredicted RBP6.6□□□□□ -1.35
SRP54YPR088C MGA1P53050 456 aa6.6□□□□□ -1.35
SRP54YPR088C DDI2P0CH63 225 aa6.59□□□□□ -1.35
SRP54YPR088C DDI3P0CH64 225 aa6.59□□□□□ -1.35
SRP54YPR088C SDH4P37298 181 aa6.59□□□□□ -1.35
SRP54YPR088C HSP10P38910 106 aa6.59□□□□□ -1.35
SRP54YPR088C CAB4P53332 305 aa6.59□□□□□ -1.35
SRP54YPR088C HOR7Q05827 59 aa6.59□□□□□ -1.35
SRP54YPR088C COX2P00410 251 aa6.58□□□□□ -1.36
SRP54YPR088C TIR2P33890 251 aa6.58□□□□□ -1.36
SRP54YPR088C PHD1P36093 366 aa6.58□□□□□ -1.36
SRP54YPR088C YCR041WP37265 110 aa6.58□□□□□ -1.36
SRP54YPR088C GLE2P40066 365 aa6.58□□□□□ -1.36
SRP54YPR088C YIL163CP40448 117 aa6.58□□□□□ -1.36
Retrieved 100 of 5,963 RNA–protein pairs in 25.1 ms