RNA–Protein interactions for RNA: YPL013C

MRPS16, Transcript of Mitochondrial ribosomal protein of the small subunit, yeast

Gene MRPS16, Length 366 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
MRPS16	YPL013C	PBP4	Q07362	185 aa	Known RBP	4.82	□□□□□ -1.64
MRPS16	YPL013C	RXT3	Q07458	294 aa		4.82	□□□□□ -1.64
MRPS16	YPL013C	TY1A-DR3	Q12441	440 aa		4.82	□□□□□ -1.64
MRPS16	YPL013C	Q0142	Q9ZZW4	58 aa		4.82	□□□□□ -1.64
MRPS16	YPL013C	TDH1	P00360	332 aa	Known RBP	4.81	□□□□□ -1.64
MRPS16	YPL013C	CDC7	P06243	507 aa		4.81	□□□□□ -1.64
MRPS16	YPL013C	SEC59	P20048	519 aa		4.81	□□□□□ -1.64
MRPS16	YPL013C	HSP12	P22943	109 aa	Known RBP	4.81	□□□□□ -1.64
MRPS16	YPL013C	CNB1	P25296	175 aa		4.81	□□□□□ -1.64
MRPS16	YPL013C	YPS1	P32329	569 aa		4.81	□□□□□ -1.64
MRPS16	YPL013C	ATG27	P46989	271 aa		4.81	□□□□□ -1.64
MRPS16	YPL013C	YGR018C	P53211	109 aa		4.81	□□□□□ -1.64
MRPS16	YPL013C	CPD1	P53314	239 aa		4.81	□□□□□ -1.64
MRPS16	YPL013C	CAB4	P53332	305 aa		4.81	□□□□□ -1.64
MRPS16	YPL013C	YMR253C	Q04835	414 aa		4.81	□□□□□ -1.64
MRPS16	YPL013C	YOR352W	Q08816	343 aa		4.81	□□□□□ -1.64
MRPS16	YPL013C	RPS2	P25443	254 aa	Known RBP	4.8	□□□□□ -1.64
MRPS16	YPL013C	HMX1	P32339	317 aa		4.8	□□□□□ -1.64
MRPS16	YPL013C	SFT2	P38166	215 aa		4.8	□□□□□ -1.64
MRPS16	YPL013C	PET100	P38958	111 aa		4.8	□□□□□ -1.64
MRPS16	YPL013C	WWM1	P43582	211 aa	Known RBP	4.8	□□□□□ -1.64
MRPS16	YPL013C	LOC1	P43586	204 aa	Predicted RBP	4.8	□□□□□ -1.64
MRPS16	YPL013C	VPS55	P47111	140 aa		4.8	□□□□□ -1.64
MRPS16	YPL013C	DSK2	P48510	373 aa		4.8	□□□□□ -1.64
MRPS16	YPL013C	YGR219W	P53307	113 aa		4.8	□□□□□ -1.64
MRPS16	YPL013C	YNR071C	P53757	342 aa		4.8	□□□□□ -1.64
MRPS16	YPL013C	HOR7	Q05827	59 aa		4.8	□□□□□ -1.64
MRPS16	YPL013C	IRC23	Q08416	157 aa		4.8	□□□□□ -1.64
MRPS16	YPL013C	ERV2	Q12284	196 aa		4.8	□□□□□ -1.64
MRPS16	YPL013C	CYC3	P06182	269 aa		4.79	□□□□□ -1.64
MRPS16	YPL013C	ADH3	P07246	375 aa	Known RBP	4.79	□□□□□ -1.64
MRPS16	YPL013C	RPS22A	P0C0W1	130 aa	Known RBP	4.79	□□□□□ -1.64
MRPS16	YPL013C	MRP2	P10663	115 aa	Predicted RBP	4.79	□□□□□ -1.64
MRPS16	YPL013C	MRPL4	P36517	319 aa		4.79	□□□□□ -1.64
MRPS16	YPL013C	TRS20	P38334	175 aa		4.79	□□□□□ -1.64
MRPS16	YPL013C	IMD2	P38697	523 aa	Known RBP	4.79	□□□□□ -1.64
MRPS16	YPL013C	PGD1	P40356	397 aa		4.79	□□□□□ -1.64
MRPS16	YPL013C	PHS1	P40857	217 aa		4.79	□□□□□ -1.64
MRPS16	YPL013C	HST4	P53688	370 aa		4.79	□□□□□ -1.64
MRPS16	YPL013C	DUG3	P53871	357 aa		4.79	□□□□□ -1.64
MRPS16	YPL013C	SNO1	Q03144	224 aa		4.79	□□□□□ -1.64
MRPS16	YPL013C	YML108W	Q03759	105 aa		4.79	□□□□□ -1.64
MRPS16	YPL013C	LOA1	Q06508	300 aa		4.79	□□□□□ -1.64
MRPS16	YPL013C	COX2	P00410	251 aa		4.78	□□□□□ -1.64
MRPS16	YPL013C	PET494	P07390	489 aa	Predicted RBP	4.78	□□□□□ -1.64
MRPS16	YPL013C	DDI2	P0CH63	225 aa		4.78	□□□□□ -1.64
MRPS16	YPL013C	DDI3	P0CH64	225 aa		4.78	□□□□□ -1.64
MRPS16	YPL013C	RNA15	P25299	296 aa	Predicted RBP	4.78	□□□□□ -1.64
MRPS16	YPL013C	POP5	P28005	173 aa		4.78	□□□□□ -1.64
MRPS16	YPL013C	LAC1	P28496	418 aa		4.78	□□□□□ -1.64
MRPS16	YPL013C	YCR041W	P37265	110 aa		4.78	□□□□□ -1.64
MRPS16	YPL013C	ICS2	P38284	255 aa		4.78	□□□□□ -1.64
MRPS16	YPL013C	MIC12	P38341	106 aa		4.78	□□□□□ -1.64
MRPS16	YPL013C	CYB5	P40312	120 aa		4.78	□□□□□ -1.64
MRPS16	YPL013C	POR2	P40478	281 aa		4.78	□□□□□ -1.64
MRPS16	YPL013C	TOS8	P53147	276 aa		4.78	□□□□□ -1.64
MRPS16	YPL013C	TIM21	P53220	239 aa		4.78	□□□□□ -1.64
MRPS16	YPL013C	UBC7	Q02159	165 aa		4.78	□□□□□ -1.64
MRPS16	YPL013C	MRX11	Q03079	207 aa		4.78	□□□□□ -1.64
MRPS16	YPL013C	LDS2	Q08218	356 aa		4.78	□□□□□ -1.64
MRPS16	YPL013C	ZEO1	Q08245	113 aa		4.78	□□□□□ -1.64
MRPS16	YPL013C	AYT1	Q12226	474 aa		4.78	□□□□□ -1.64
MRPS16	YPL013C	YHR213W	P0CI67	198 aa		4.77	□□□□□ -1.65
MRPS16	YPL013C	ERS1	P17261	260 aa		4.77	□□□□□ -1.65
MRPS16	YPL013C	COQ3	P27680	312 aa		4.77	□□□□□ -1.65
MRPS16	YPL013C	RPS0A	P32905	252 aa	Known RBP	4.77	□□□□□ -1.65
MRPS16	YPL013C	AFR1	P33304	620 aa		4.77	□□□□□ -1.65
MRPS16	YPL013C	TIR2	P33890	251 aa		4.77	□□□□□ -1.65
MRPS16	YPL013C	YNL194C	P40169	301 aa		4.77	□□□□□ -1.65
MRPS16	YPL013C	YDL186W	P48568	277 aa		4.77	□□□□□ -1.65
MRPS16	YPL013C	NCE103	P53615	221 aa		4.77	□□□□□ -1.65
MRPS16	YPL013C	DAD3	P69850	94 aa		4.77	□□□□□ -1.65
MRPS16	YPL013C	YML122C	Q03207	126 aa		4.77	□□□□□ -1.65
MRPS16	YPL013C	LRS4	Q04087	347 aa	Known RBP	4.77	□□□□□ -1.65
MRPS16	YPL013C	TIM18	Q08749	192 aa		4.77	□□□□□ -1.65
MRPS16	YPL013C	PRM3	Q08931	133 aa		4.77	□□□□□ -1.65
MRPS16	YPL013C	NNK1	P36003	928 aa		4.76	□□□□□ -1.65
MRPS16	YPL013C	PRY2	P36110	329 aa		4.76	□□□□□ -1.65
MRPS16	YPL013C	MRPS9	P38120	278 aa		4.76	□□□□□ -1.65
MRPS16	YPL013C	LSM2	P38203	95 aa	Known RBP	4.76	□□□□□ -1.65
MRPS16	YPL013C	YHR173C	P38864	112 aa		4.76	□□□□□ -1.65
MRPS16	YPL013C	HSP10	P38910	106 aa		4.76	□□□□□ -1.65
MRPS16	YPL013C	YPI1	P43587	155 aa		4.76	□□□□□ -1.65
MRPS16	YPL013C	OCA2	P53949	197 aa		4.76	□□□□□ -1.65
MRPS16	YPL013C	MOT3	P54785	490 aa	Known RBP	4.76	□□□□□ -1.65
MRPS16	YPL013C	MRPL23	Q12487	163 aa	Predicted RBP	4.76	□□□□□ -1.65
MRPS16	YPL013C	RPB3	P16370	318 aa	Known RBP	4.75	□□□□□ -1.65
MRPS16	YPL013C	ATG8	P38182	117 aa	RIP-Chip data	4.75	□□□□□ -1.65	not detected
MRPS16	YPL013C	SNF11	P38956	169 aa		4.75	□□□□□ -1.65
MRPS16	YPL013C	SNU13	P39990	126 aa	Known RBP	4.75	□□□□□ -1.65
MRPS16	YPL013C	YIL077C	P40508	320 aa		4.75	□□□□□ -1.65
MRPS16	YPL013C	YJL027C	P47063	138 aa	Predicted RBP	4.75	□□□□□ -1.65
MRPS16	YPL013C	BNS1	P50084	137 aa		4.75	□□□□□ -1.65
MRPS16	YPL013C	TIM11	P81449	96 aa	Predicted RBP	4.75	□□□□□ -1.65
MRPS16	YPL013C	YMR181C	Q03231	154 aa		4.75	□□□□□ -1.65
MRPS16	YPL013C	MSA1	Q08471	629 aa		4.75	□□□□□ -1.65
MRPS16	YPL013C	FIT2	Q08906	153 aa		4.75	□□□□□ -1.65
MRPS16	YPL013C	ATX2	Q12067	313 aa		4.75	□□□□□ -1.65
MRPS16	YPL013C	DYN1	P36022	4092 aa		4.75	□□□□□ -1.65
MRPS16	YPL013C	FMP49	A0A023PZB3	126 aa		4.74	□□□□□ -1.65

Retrieved 100 of 5,963 RNA–protein pairs in 16.6 ms