RNA–Protein interactions for RNA: YNL025C

SSN8, Transcript of Cyclin-like component of the RNA polymerase II holoenzyme, yeastyeast

Gene SSN8, Length 972 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSN8YNL025C SFT2P38166 215 aa2.41□□□□□ -2.02
SSN8YNL025C GPI18P38211 433 aa2.41□□□□□ -2.02
SSN8YNL025C RFS1P38234 210 aaKnown RBP2.41□□□□□ -2.02
SSN8YNL025C RPL14BP38754 138 aaKnown RBP2.41□□□□□ -2.02
SSN8YNL025C ARC15P40518 154 aaRIP-Chip data2.41□□□□□ -2.02not detected
SSN8YNL025C IGD1P43598 195 aa2.41□□□□□ -2.02
SSN8YNL025C EAF6P47128 113 aa2.41□□□□□ -2.02
SSN8YNL025C RPL9BP51401 191 aaKnown RBP2.41□□□□□ -2.02
SSN8YNL025C EST3Q03096 181 aa2.41□□□□□ -2.02
SSN8YNL025C PBA1Q05778 276 aa2.41□□□□□ -2.02
SSN8YNL025C MEU1Q07938 337 aaKnown RBP RIP-Chip data2.41□□□□□ -2.02not detected
SSN8YNL025C OCA6Q12454 224 aa2.41□□□□□ -2.02
SSN8YNL025C YPL247CQ12523 523 aa2.41□□□□□ -2.02
SSN8YNL025C TY1B-DR4Q07793 1604 aa2.41□□□□□ -2.02
SSN8YNL025C PDR5P33302 1511 aaKnown RBP2.41□□□□□ -2.02
SSN8YNL025C HSL1P34244 1518 aa2.41□□□□□ -2.02
SSN8YNL025C GEA1P47102 1408 aaPredicted RBP2.41□□□□□ -2.02
SSN8YNL025C TRM3Q07527 1436 aa2.41□□□□□ -2.02
SSN8YNL025C YAR023CD6VPM8 179 aa2.4□□□□□ -2.03
SSN8YNL025C PRE1P22141 198 aaKnown RBP2.4□□□□□ -2.03
SSN8YNL025C YBL081WP38180 368 aaKnown RBP2.4□□□□□ -2.03
SSN8YNL025C VTC1P40046 129 aaRIP-Chip data2.4□□□□□ -2.03not detected
SSN8YNL025C YER135CP40082 130 aa2.4□□□□□ -2.03
SSN8YNL025C YJL218WP40892 196 aaKnown RBP2.4□□□□□ -2.03
SSN8YNL025C GNA1P43577 159 aaPredicted RBP2.4□□□□□ -2.03
SSN8YNL025C CAX4P53223 239 aa2.4□□□□□ -2.03
SSN8YNL025C YGR164WP53291 111 aa2.4□□□□□ -2.03
SSN8YNL025C DAD3P69850 94 aa2.4□□□□□ -2.03
SSN8YNL025C YMR295CQ03559 197 aa2.4□□□□□ -2.03
SSN8YNL025C TVP18Q04767 167 aa2.4□□□□□ -2.03
SSN8YNL025C SYM1Q06563 197 aa2.4□□□□□ -2.03
SSN8YNL025C UIP4Q08926 304 aa2.4□□□□□ -2.03
SSN8YNL025C DFM1Q12743 341 aaKnown RBP2.4□□□□□ -2.03
SSN8YNL025C DNA2P38859 1522 aa2.4□□□□□ -2.03
SSN8YNL025C SWR1Q05471 1514 aa2.39□□□□□ -2.03
SSN8YNL025C TIM9O74700 87 aa2.39□□□□□ -2.03
SSN8YNL025C CUP9P41817 306 aa2.39□□□□□ -2.03
SSN8YNL025C YGR026WP53217 278 aa2.39□□□□□ -2.03
SSN8YNL025C ATP19P81451 68 aa2.39□□□□□ -2.03
SSN8YNL025C YDR274CP87283 123 aa2.39□□□□□ -2.03
SSN8YNL025C YDR102CQ03864 110 aa2.39□□□□□ -2.03
SSN8YNL025C SHH3Q04487 196 aa2.39□□□□□ -2.03
SSN8YNL025C YOL029CQ08187 201 aa2.39□□□□□ -2.03
SSN8YNL025C SCC2Q04002 1493 aa2.39□□□□□ -2.03
SSN8YNL025C REV3P14284 1504 aa2.38□□□□□ -2.03
SSN8YNL025C UBC5P15732 148 aa2.38□□□□□ -2.03
SSN8YNL025C TMA19P35691 167 aaKnown RBP2.38□□□□□ -2.03
SSN8YNL025C ECM34P38728 170 aa2.38□□□□□ -2.03
SSN8YNL025C FYV4P38783 130 aaPredicted RBP2.38□□□□□ -2.03
SSN8YNL025C YHR125WP38831 101 aa2.38□□□□□ -2.03
SSN8YNL025C MIG3P39943 394 aa2.38□□□□□ -2.03
SSN8YNL025C YEL028WP39989 153 aa2.38□□□□□ -2.03
SSN8YNL025C MPM1P40364 252 aa2.38□□□□□ -2.03
SSN8YNL025C REE1P40893 198 aa2.38□□□□□ -2.03
SSN8YNL025C PAM16P42949 149 aa2.38□□□□□ -2.03
SSN8YNL025C DIE2P50076 525 aa2.38□□□□□ -2.03
SSN8YNL025C GAL83Q04739 417 aa2.38□□□□□ -2.03
SSN8YNL025C ECM19Q06011 112 aa2.38□□□□□ -2.03
SSN8YNL025C KEI1Q06346 221 aa2.38□□□□□ -2.03
SSN8YNL025C PPT2Q12036 173 aa2.38□□□□□ -2.03
SSN8YNL025C YOR097CQ12274 175 aaPredicted RBP2.38□□□□□ -2.03
SSN8YNL025C YCL021W-AQ96VH3 125 aa2.38□□□□□ -2.03
SSN8YNL025C PAN1P32521 1480 aa2.38□□□□□ -2.03
SSN8YNL025C NUP159P40477 1460 aa2.38□□□□□ -2.03
SSN8YNL025C GCN2P15442 1659 aa2.37□□□□□ -2.03
SSN8YNL025C KRE5P22023 1365 aa2.37□□□□□ -2.03
SSN8YNL025C SGA1P08019 549 aa2.37□□□□□ -2.03
SSN8YNL025C MRS4P23500 304 aa2.37□□□□□ -2.03
SSN8YNL025C YCR099CP25657 155 aa2.37□□□□□ -2.03
SSN8YNL025C SDH4P37298 181 aa2.37□□□□□ -2.03
SSN8YNL025C RRT13P40042 185 aa2.37□□□□□ -2.03
SSN8YNL025C YER188WP40103 239 aa2.37□□□□□ -2.03
SSN8YNL025C GAT4P40569 121 aa2.37□□□□□ -2.03
SSN8YNL025C YIR035CP40579 254 aa2.37□□□□□ -2.03
SSN8YNL025C RCE1Q03530 315 aa2.37□□□□□ -2.03
SSN8YNL025C ANT1Q06497 328 aa2.37□□□□□ -2.03
SSN8YNL025C GTT2Q12390 233 aa2.37□□□□□ -2.03
SSN8YNL025C YER078W-AQ3E7A2 54 aa2.37□□□□□ -2.03
SSN8YNL025C YCR075W-AQ3E830 75 aa2.37□□□□□ -2.03
SSN8YNL025C ESC1Q03661 1658 aaKnown RBP2.37□□□□□ -2.03
SSN8YNL025C YCF1P39109 1515 aaKnown RBP2.37□□□□□ -2.03
SSN8YNL025C HIR3P47171 1648 aa2.36□□□□□ -2.03
SSN8YNL025C ESP1Q03018 1630 aa2.36□□□□□ -2.03
SSN8YNL025C DDR48P18899 430 aaKnown RBP2.36□□□□□ -2.03
SSN8YNL025C MDH2P22133 377 aa2.36□□□□□ -2.03
SSN8YNL025C TOM40P23644 387 aaKnown RBP2.36□□□□□ -2.03
SSN8YNL025C GAA1P39012 614 aa2.36□□□□□ -2.03
SSN8YNL025C YEL073CP39974 107 aa2.36□□□□□ -2.03
SSN8YNL025C SPC25P40014 221 aa2.36□□□□□ -2.03
SSN8YNL025C BAT2P47176 376 aaKnown RBP2.36□□□□□ -2.03
SSN8YNL025C YNR064CP53750 290 aa2.36□□□□□ -2.03
SSN8YNL025C LIP1Q03579 150 aa2.36□□□□□ -2.03
SSN8YNL025C YMR103CQ04436 120 aa2.36□□□□□ -2.03
SSN8YNL025C ATP20Q12233 115 aa2.36□□□□□ -2.03
SSN8YNL025C BPT1P14772 1559 aa2.36□□□□□ -2.03
SSN8YNL025C POR1P04840 283 aaKnown RBP2.35□□□□□ -2.03
SSN8YNL025C YCR050CP25630 102 aa2.35□□□□□ -2.03
SSN8YNL025C PEX4P29340 183 aa2.35□□□□□ -2.03
SSN8YNL025C CLB6P32943 380 aa2.35□□□□□ -2.03
SSN8YNL025C SRL3P36167 246 aa2.35□□□□□ -2.03
Retrieved 100 of 5,963 RNA–protein pairs in 25.3 ms