RNA–Protein interactions for RNA: YLR199C

PBA1, Transcript of Protein involved in 20S proteasome assembly, yeastyeast

Gene PBA1, Length 831 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PBA1YLR199C YFL012WP43580 148 aa2.52□□□□□ -2.01
PBA1YLR199C ECO1P43605 281 aa2.52□□□□□ -2.01
PBA1YLR199C TSA2Q04120 196 aa2.52□□□□□ -2.01
PBA1YLR199C NAT3Q06504 195 aa2.52□□□□□ -2.01
PBA1YLR199C HRD1Q08109 551 aa2.52□□□□□ -2.01
PBA1YLR199C TMC1Q08422 150 aaPredicted RBP2.52□□□□□ -2.01
PBA1YLR199C UTH1P36135 365 aa2.51□□□□□ -2.01
PBA1YLR199C MRPL17P36528 281 aa2.51□□□□□ -2.01
PBA1YLR199C CTR2P38865 189 aa2.51□□□□□ -2.01
PBA1YLR199C YER134CP40081 178 aa2.51□□□□□ -2.01
PBA1YLR199C PRE5P40302 234 aaKnown RBP2.51□□□□□ -2.01
PBA1YLR199C CCC1P47818 322 aa2.51□□□□□ -2.01
PBA1YLR199C DSK2P48510 373 aa2.51□□□□□ -2.01
PBA1YLR199C CAB4P53332 305 aa2.51□□□□□ -2.01
PBA1YLR199C YOR268CQ08734 132 aa2.51□□□□□ -2.01
PBA1YLR199C SAS5Q99314 248 aa2.51□□□□□ -2.01
PBA1YLR199C CPR5P35176 225 aa2.5□□□□□ -2.01
PBA1YLR199C PAN3P36102 679 aaPredicted RBP2.5□□□□□ -2.01
PBA1YLR199C VTC1P40046 129 aaRIP-Chip data2.5□□□□□ -2.01not detected
PBA1YLR199C YPL073CP40323 161 aa2.5□□□□□ -2.01
PBA1YLR199C SMD3P43321 101 aaKnown RBP2.5□□□□□ -2.01
PBA1YLR199C YGR026WP53217 278 aa2.5□□□□□ -2.01
PBA1YLR199C TIM8P57744 87 aa2.5□□□□□ -2.01
PBA1YLR199C YDR274CP87283 123 aa2.5□□□□□ -2.01
PBA1YLR199C COF1Q03048 143 aaKnown RBP2.5□□□□□ -2.01
PBA1YLR199C ACC1Q00955 2233 aaKnown RBP2.49□□□□□ -2.01
PBA1YLR199C YAR023CD6VPM8 179 aa2.49□□□□□ -2.01
PBA1YLR199C CPA1P07258 411 aaKnown RBP2.49□□□□□ -2.01
PBA1YLR199C SCL1P21243 252 aaKnown RBP2.49□□□□□ -2.01
PBA1YLR199C SHE2P36068 246 aaKnown RBP RIP-Chip data2.49□□□□□ -2.01not detected
PBA1YLR199C YNL200CP40165 246 aaKnown RBP2.49□□□□□ -2.01
PBA1YLR199C GVP36P40531 326 aaKnown RBP2.49□□□□□ -2.01
PBA1YLR199C YFR054CP43622 192 aa2.49□□□□□ -2.01
PBA1YLR199C FIP1P45976 327 aa2.49□□□□□ -2.01
PBA1YLR199C AIF1P52923 378 aa2.49□□□□□ -2.01
PBA1YLR199C YMR099CQ03161 297 aaKnown RBP2.49□□□□□ -2.01
PBA1YLR199C VPS71Q03433 280 aa2.49□□□□□ -2.01
PBA1YLR199C FMN1Q03778 218 aa2.49□□□□□ -2.01
PBA1YLR199C SPG3Q04398 127 aaPredicted RBP2.49□□□□□ -2.01
PBA1YLR199C YDR278CQ05612 105 aa2.49□□□□□ -2.01
PBA1YLR199C YPR063CQ12160 140 aa2.49□□□□□ -2.01
PBA1YLR199C WIP1Q2V2P8 89 aa2.49□□□□□ -2.01
PBA1YLR199C ODC2Q99297 307 aa2.49□□□□□ -2.01
PBA1YLR199C GSC2P40989 1895 aa2.49□□□□□ -2.01
PBA1YLR199C ATP5P09457 212 aa2.48□□□□□ -2.01
PBA1YLR199C YKR032WP36127 104 aa2.48□□□□□ -2.01
PBA1YLR199C GLR1P41921 483 aaKnown RBP2.48□□□□□ -2.01
PBA1YLR199C TIM13P53299 105 aa2.48□□□□□ -2.01
PBA1YLR199C YDR366CP87287 132 aa2.48□□□□□ -2.01
PBA1YLR199C FYV12Q08559 129 aa2.48□□□□□ -2.01
PBA1YLR199C RPO41P13433 1351 aaKnown RBP2.48□□□□□ -2.01
PBA1YLR199C MSW1P04803 379 aa2.47□□□□□ -2.01
PBA1YLR199C MID2P36027 376 aa2.47□□□□□ -2.01
PBA1YLR199C MRPS9P38120 278 aa2.47□□□□□ -2.01
PBA1YLR199C FYV4P38783 130 aaPredicted RBP2.47□□□□□ -2.01
PBA1YLR199C GLC8P41818 229 aa2.47□□□□□ -2.01
PBA1YLR199C ERJ5P43613 295 aaPredicted RBP2.47□□□□□ -2.01
PBA1YLR199C HHO1P53551 258 aa2.47□□□□□ -2.01
PBA1YLR199C DIG2Q03373 323 aaKnown RBP2.47□□□□□ -2.01
PBA1YLR199C FRQ1Q06389 190 aa2.47□□□□□ -2.01
PBA1YLR199C YOR214CQ12282 236 aa2.47□□□□□ -2.01
PBA1YLR199C Q0144Q9ZZW2 109 aa2.47□□□□□ -2.01
PBA1YLR199C CCH1P50077 2039 aa2.47□□□□□ -2.01
PBA1YLR199C POR1P04840 283 aaKnown RBP2.46□□□□□ -2.02
PBA1YLR199C NSP1P14907 823 aaKnown RBP2.46□□□□□ -2.02
PBA1YLR199C RPC19P28000 142 aaKnown RBP2.46□□□□□ -2.02
PBA1YLR199C RPS1AP33442 255 aaKnown RBP2.46□□□□□ -2.02
PBA1YLR199C YER181CP40097 107 aa2.46□□□□□ -2.02
PBA1YLR199C PIR5P46999 287 aa2.46□□□□□ -2.02
PBA1YLR199C SBH1P52870 82 aa2.46□□□□□ -2.02
PBA1YLR199C YGR039WP53225 103 aa2.46□□□□□ -2.02
PBA1YLR199C YGR219WP53307 113 aa2.46□□□□□ -2.02
PBA1YLR199C GAL83Q04739 417 aa2.46□□□□□ -2.02
PBA1YLR199C YPD1Q07688 167 aa2.46□□□□□ -2.02
PBA1YLR199C ATP14Q12349 124 aa2.46□□□□□ -2.02
PBA1YLR199C ATO3Q12359 275 aa2.46□□□□□ -2.02
PBA1YLR199C SLO1Q3E784 85 aa2.46□□□□□ -2.02
PBA1YLR199C TIR1P10863 254 aa2.45□□□□□ -2.02
PBA1YLR199C RSA4P25382 515 aaKnown RBP2.45□□□□□ -2.02
PBA1YLR199C SPT14P32363 452 aa2.45□□□□□ -2.02
PBA1YLR199C UMP1P38293 148 aa2.45□□□□□ -2.02
PBA1YLR199C RPS20P38701 121 aaKnown RBP2.45□□□□□ -2.02
PBA1YLR199C YHL026CP38740 315 aa2.45□□□□□ -2.02
PBA1YLR199C YHR180WP38868 163 aa2.45□□□□□ -2.02
PBA1YLR199C PGD1P40356 397 aa2.45□□□□□ -2.02
PBA1YLR199C YGL193CP53097 103 aa2.45□□□□□ -2.02
PBA1YLR199C MRPS8Q03799 155 aa2.45□□□□□ -2.02
PBA1YLR199C SDH7Q04401 133 aa2.45□□□□□ -2.02
PBA1YLR199C CNL1Q06333 122 aa2.45□□□□□ -2.02
PBA1YLR199C PMD1P32634 1753 aa2.45□□□□□ -2.02
PBA1YLR199C YLR419WQ06698 1435 aaKnown RBP2.44□□□□□ -2.02
PBA1YLR199C SNC2P33328 115 aa2.44□□□□□ -2.02
PBA1YLR199C PTC1P35182 281 aa2.44□□□□□ -2.02
PBA1YLR199C YBR220CP38318 560 aa2.44□□□□□ -2.02
PBA1YLR199C NSA2P40078 261 aaKnown RBP2.44□□□□□ -2.02
PBA1YLR199C MPC3P53311 146 aa2.44□□□□□ -2.02
PBA1YLR199C VPS28Q02767 242 aa2.44□□□□□ -2.02
PBA1YLR199C CGI121Q03705 181 aaKnown RBP2.44□□□□□ -2.02
PBA1YLR199C NEJ1Q06148 342 aa2.44□□□□□ -2.02
PBA1YLR199C RPS23AP0CX29 145 aaKnown RBP2.43□□□□□ -2.02
Retrieved 100 of 5,963 RNA–protein pairs in 20.5 ms