RNA–Protein interactions for RNA: YLR139C

SLS1, Transcript of Mitochondrial membrane protein, yeast

Gene SLS1, Length 1,932 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SLS1	YLR139C	TIM13	P53299	105 aa		0.8	□□□□□ -2.28
SLS1	YLR139C	YIP3	P53633	176 aa		0.8	□□□□□ -2.28
SLS1	YLR139C	RIM9	Q04734	239 aa		0.8	□□□□□ -2.28
SLS1	YLR139C	CMC2	Q3E7A4	109 aa		0.8	□□□□□ -2.28
SLS1	YLR139C	CMD1	P06787	147 aa	Known RBP	0.79	□□□□□ -2.28
SLS1	YLR139C	RPL35A	P0CX84	120 aa	Known RBP	0.79	□□□□□ -2.28
SLS1	YLR139C	RPL35B	P0CX85	120 aa	Known RBP	0.79	□□□□□ -2.28
SLS1	YLR139C	YKR070W	P36151	352 aa	Known RBP	0.79	□□□□□ -2.28
SLS1	YLR139C	YPR127W	Q06494	345 aa		0.79	□□□□□ -2.28
SLS1	YLR139C	YOR214C	Q12282	236 aa		0.79	□□□□□ -2.28
SLS1	YLR139C	NUF2	P33895	451 aa		0.79	□□□□□ -2.28
SLS1	YLR139C	SHB17	P36136	271 aa	Known RBP	0.79	□□□□□ -2.28
SLS1	YLR139C	TTI2	P47168	421 aa		0.79	□□□□□ -2.28
SLS1	YLR139C	YNL140C	P53910	189 aa		0.79	□□□□□ -2.28
SLS1	YLR139C	VPS28	Q02767	242 aa		0.79	□□□□□ -2.28
SLS1	YLR139C	TLG1	Q03322	224 aa		0.79	□□□□□ -2.28
SLS1	YLR139C	GRE1	Q08969	168 aa		0.79	□□□□□ -2.28
SLS1	YLR139C	RIF1	P29539	1916 aa		0.79	□□□□□ -2.28
SLS1	YLR139C	GLR1	P41921	483 aa	Known RBP	0.78	□□□□□ -2.28
SLS1	YLR139C	TMA20	P89886	181 aa	Predicted RBP	0.78	□□□□□ -2.28
SLS1	YLR139C	YDC1	Q02896	317 aa		0.78	□□□□□ -2.28
SLS1	YLR139C	CPR5	P35176	225 aa		0.77	□□□□□ -2.29
SLS1	YLR139C	YGL230C	P53074	147 aa		0.77	□□□□□ -2.29
SLS1	YLR139C	YKR005C	Q02203	525 aa		0.77	□□□□□ -2.29
SLS1	YLR139C	RAD6	P06104	172 aa		0.77	□□□□□ -2.29
SLS1	YLR139C	FES1	P38260	290 aa		0.77	□□□□□ -2.29
SLS1	YLR139C	HHT1	P61830	136 aa		0.77	□□□□□ -2.29
SLS1	YLR139C	KEI1	Q06346	221 aa		0.77	□□□□□ -2.29
SLS1	YLR139C	YLR053C	Q12026	108 aa		0.77	□□□□□ -2.29
SLS1	YLR139C	QCR2	P07257	368 aa		0.76	□□□□□ -2.29
SLS1	YLR139C	MAK3	Q03503	176 aa		0.76	□□□□□ -2.29
SLS1	YLR139C	RDI1	Q12434	202 aa		0.76	□□□□□ -2.29
SLS1	YLR139C	TRM3	Q07527	1436 aa		0.75	□□□□□ -2.29
SLS1	YLR139C	UBC6	P33296	250 aa	Predicted RBP	0.75	□□□□□ -2.29
SLS1	YLR139C	YEL073C	P39974	107 aa		0.75	□□□□□ -2.29
SLS1	YLR139C	YER121W	P40076	114 aa		0.75	□□□□□ -2.29
SLS1	YLR139C	SOL1	P50278	321 aa		0.75	□□□□□ -2.29
SLS1	YLR139C	NQM1	P53228	333 aa	Predicted RBP	0.75	□□□□□ -2.29
SLS1	YLR139C	HSK3	P69852	69 aa		0.75	□□□□□ -2.29
SLS1	YLR139C	YDR476C	Q03362	224 aa		0.75	□□□□□ -2.29
SLS1	YLR139C	TMA23	Q03525	211 aa		0.75	□□□□□ -2.29
SLS1	YLR139C	THI74	Q04083	370 aa		0.75	□□□□□ -2.29
SLS1	YLR139C	SRP102	P36057	244 aa	Predicted RBP	0.74	□□□□□ -2.29
SLS1	YLR139C	MOB1	P40484	314 aa		0.74	□□□□□ -2.29
SLS1	YLR139C	PAC10	P48363	199 aa		0.74	□□□□□ -2.29
SLS1	YLR139C	YGL101W	P53144	215 aa		0.74	□□□□□ -2.29
SLS1	YLR139C	AVO2	Q04749	426 aa		0.74	□□□□□ -2.29
SLS1	YLR139C	SYM1	Q06563	197 aa		0.74	□□□□□ -2.29
SLS1	YLR139C	HRD1	Q08109	551 aa		0.74	□□□□□ -2.29
SLS1	YLR139C	CDC39	P25655	2108 aa	Known RBP	0.74	□□□□□ -2.29
SLS1	YLR139C	AME1	P38313	324 aa		0.74	□□□□□ -2.29
SLS1	YLR139C	YML079W	Q03629	201 aa		0.74	□□□□□ -2.29
SLS1	YLR139C	YEL028W	P39989	153 aa		0.73	□□□□□ -2.29
SLS1	YLR139C	LIP1	Q03579	150 aa		0.73	□□□□□ -2.29
SLS1	YLR139C	NSL1	Q12143	216 aa		0.73	□□□□□ -2.29
SLS1	YLR139C	SPS2	P08459	502 aa		0.72	□□□□□ -2.29
SLS1	YLR139C	RPS28B	P0C0X0	67 aa	Known RBP	0.72	□□□□□ -2.29
SLS1	YLR139C	PBI2	P0CT04	75 aa	Known RBP	0.72	□□□□□ -2.29
SLS1	YLR139C	PTC1	P35182	281 aa		0.72	□□□□□ -2.29
SLS1	YLR139C	CSH1	P38287	376 aa		0.72	□□□□□ -2.29
SLS1	YLR139C	YGR269W	P40326	108 aa		0.72	□□□□□ -2.29
SLS1	YLR139C	DLS1	P40366	167 aa		0.72	□□□□□ -2.29
SLS1	YLR139C	LSM3	P57743	89 aa	Known RBP	0.72	□□□□□ -2.29
SLS1	YLR139C	ATG10	Q07879	167 aa		0.72	□□□□□ -2.29
SLS1	YLR139C	UIP4	Q08926	304 aa		0.72	□□□□□ -2.29
SLS1	YLR139C	YDL157C	Q12082	118 aa		0.72	□□□□□ -2.29
SLS1	YLR139C	RPS28A	Q3E7X9	67 aa	Predicted RBP	0.72	□□□□□ -2.29
SLS1	YLR139C	ATP5	P09457	212 aa		0.72	□□□□□ -2.29
SLS1	YLR139C	UBI4	P0CG63	381 aa	Known RBP	0.72	□□□□□ -2.29
SLS1	YLR139C	PRE1	P22141	198 aa	Known RBP	0.72	□□□□□ -2.29
SLS1	YLR139C	YCR001W	P25347	104 aa		0.72	□□□□□ -2.29
SLS1	YLR139C	YPD1	Q07688	167 aa		0.72	□□□□□ -2.29
SLS1	YLR139C	YLR046C	Q12253	270 aa		0.72	□□□□□ -2.29
SLS1	YLR139C	EFG1	Q3E705	233 aa	Known RBP	0.72	□□□□□ -2.29
SLS1	YLR139C	UBR1	P19812	1950 aa		0.71	□□□□□ -2.3
SLS1	YLR139C	APQ12	P40532	138 aa		0.71	□□□□□ -2.3
SLS1	YLR139C	YDR102C	Q03864	110 aa		0.71	□□□□□ -2.3
SLS1	YLR139C	RPS25B	P0C0T4	108 aa	Known RBP	0.7	□□□□□ -2.3
SLS1	YLR139C	YOL013W-A	P0C272	63 aa	Predicted RBP	0.7	□□□□□ -2.3
SLS1	YLR139C	RPL30	P14120	105 aa	Known RBP	0.7	□□□□□ -2.3
SLS1	YLR139C	BUB2	P26448	306 aa	Predicted RBP	0.7	□□□□□ -2.3
SLS1	YLR139C	DER1	P38307	211 aa		0.7	□□□□□ -2.3
SLS1	YLR139C	YPT31	P38555	223 aa	Known RBP	0.7	□□□□□ -2.3
SLS1	YLR139C	HTD2	P38790	280 aa	Known RBP	0.7	□□□□□ -2.3
SLS1	YLR139C	ORM1	P53224	222 aa		0.7	□□□□□ -2.3
SLS1	YLR139C	YNR064C	P53750	290 aa		0.7	□□□□□ -2.3
SLS1	YLR139C	RPS25A	Q3E792	108 aa	Predicted RBP	0.7	□□□□□ -2.3
SLS1	YLR139C	INO4	P13902	151 aa		0.7	□□□□□ -2.3
SLS1	YLR139C	PEX34	P25584	144 aa		0.7	□□□□□ -2.3
SLS1	YLR139C	ARC19	P33204	171 aa	Known RBP	0.7	□□□□□ -2.3
SLS1	YLR139C	FIG1	P38224	298 aa		0.7	□□□□□ -2.3
SLS1	YLR139C	CCC1	P47818	322 aa		0.7	□□□□□ -2.3
SLS1	YLR139C	YPR114W	Q06107	315 aa		0.7	□□□□□ -2.3
SLS1	YLR139C	RME1	P32338	300 aa	Known RBP	0.69	□□□□□ -2.3
SLS1	YLR139C	GEP7	P53171	287 aa		0.69	□□□□□ -2.3
SLS1	YLR139C	FCY1	Q12178	158 aa		0.69	□□□□□ -2.3
SLS1	YLR139C	QCR6	P00127	147 aa		0.68	□□□□□ -2.3
SLS1	YLR139C	SLM6	P38343	150 aa		0.68	□□□□□ -2.3
SLS1	YLR139C	CIN5	P40917	295 aa		0.68	□□□□□ -2.3
SLS1	YLR139C	APS3	P47064	194 aa		0.68	□□□□□ -2.3

Retrieved 100 of 5,963 RNA–protein pairs in 31.3 ms