RNA–Protein interactions for RNA: YLR005W

SSL1, Transcript of Subunit of the core form of RNA polymerase transcription factor TFIIH, yeastyeast

Gene SSL1, Length 1,386 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSL1YLR005W HPA3P39979 161 aa2.85□□□□□ -1.95
SSL1YLR005W RPL13BP40212 199 aaKnown RBP2.85□□□□□ -1.95
SSL1YLR005W HXT14P42833 540 aa2.85□□□□□ -1.95
SSL1YLR005W MST27P53176 234 aa2.85□□□□□ -1.95
SSL1YLR005W ORM1P53224 222 aa2.85□□□□□ -1.95
SSL1YLR005W EST3Q03096 181 aa2.85□□□□□ -1.95
SSL1YLR005W SDH7Q04401 133 aa2.85□□□□□ -1.95
SSL1YLR005W DCS1Q06151 350 aa2.85□□□□□ -1.95
SSL1YLR005W PEX27Q08580 376 aa2.85□□□□□ -1.95
SSL1YLR005W YPR013CQ12145 317 aa2.85□□□□□ -1.95
SSL1YLR005W YCT1Q12235 531 aa2.85□□□□□ -1.95
SSL1YLR005W ATG5Q12380 294 aa2.85□□□□□ -1.95
SSL1YLR005W RPL13AQ12690 199 aaPredicted RBP2.85□□□□□ -1.95
SSL1YLR005W ZRC1P20107 442 aa2.84□□□□□ -1.96
SSL1YLR005W NPL6P32832 435 aa2.84□□□□□ -1.96
SSL1YLR005W CMC1P36064 111 aa2.84□□□□□ -1.96
SSL1YLR005W VMA22P38784 181 aa2.84□□□□□ -1.96
SSL1YLR005W UIP3P39547 235 aa2.84□□□□□ -1.96
SSL1YLR005W SNX4P47057 423 aa2.84□□□□□ -1.96
SSL1YLR005W YJL027CP47063 138 aaPredicted RBP2.84□□□□□ -1.96
SSL1YLR005W NIF3P53081 288 aa2.84□□□□□ -1.96
SSL1YLR005W MSO1P53604 210 aaKnown RBP2.84□□□□□ -1.96
SSL1YLR005W DYN2Q02647 92 aa2.84□□□□□ -1.96
SSL1YLR005W SGF11Q03067 99 aa2.84□□□□□ -1.96
SSL1YLR005W FRQ1Q06389 190 aa2.84□□□□□ -1.96
SSL1YLR005W POS5Q06892 414 aa2.84□□□□□ -1.96
SSL1YLR005W SUA5P32579 426 aa2.83□□□□□ -1.96
SSL1YLR005W WSS1P38838 269 aa2.83□□□□□ -1.96
SSL1YLR005W BDH1P39714 382 aa2.83□□□□□ -1.96
SSL1YLR005W SER2P42941 309 aa2.83□□□□□ -1.96
SSL1YLR005W GPI2P46961 280 aa2.83□□□□□ -1.96
SSL1YLR005W YGR018CP53211 109 aa2.83□□□□□ -1.96
SSL1YLR005W YIP3P53633 176 aa2.83□□□□□ -1.96
SSL1YLR005W HAL1Q01766 294 aa2.83□□□□□ -1.96
SSL1YLR005W VAM10Q08474 114 aa2.83□□□□□ -1.96
SSL1YLR005W YPR063CQ12160 140 aa2.83□□□□□ -1.96
SSL1YLR005W HTZ1Q12692 134 aaKnown RBP2.83□□□□□ -1.96
SSL1YLR005W YNL146C-AQ3E7Z1 64 aa2.83□□□□□ -1.96
SSL1YLR005W CDC7P06243 507 aa2.82□□□□□ -1.96
SSL1YLR005W RPL2AP0CX45 254 aaKnown RBP2.82□□□□□ -1.96
SSL1YLR005W RPL2BP0CX46 254 aaKnown RBP2.82□□□□□ -1.96
SSL1YLR005W URA5P13298 226 aaKnown RBP2.82□□□□□ -1.96
SSL1YLR005W CSH1P38287 376 aa2.82□□□□□ -1.96
SSL1YLR005W IPI1P38803 334 aaPredicted RBP2.82□□□□□ -1.96
SSL1YLR005W MCM22P47167 239 aa2.82□□□□□ -1.96
SSL1YLR005W TPN1P53099 579 aa2.82□□□□□ -1.96
SSL1YLR005W UBC7Q02159 165 aa2.82□□□□□ -1.96
SSL1YLR005W MRPS8Q03799 155 aa2.82□□□□□ -1.96
SSL1YLR005W YMR244WQ04018 355 aa2.82□□□□□ -1.96
SSL1YLR005W PRM4Q12498 284 aa2.82□□□□□ -1.96
SSL1YLR005W YMR230W-AQ3E7B5 62 aa2.82□□□□□ -1.96
SSL1YLR005W YCR016WP25617 290 aaKnown RBP2.81□□□□□ -1.96
SSL1YLR005W YCR022CP25620 114 aa2.81□□□□□ -1.96
SSL1YLR005W YKL162CP36052 402 aa2.81□□□□□ -1.96
SSL1YLR005W MRPL3P36516 390 aa2.81□□□□□ -1.96
SSL1YLR005W RPL32P38061 130 aaKnown RBP2.81□□□□□ -1.96
SSL1YLR005W SNU13P39990 126 aaKnown RBP2.81□□□□□ -1.96
SSL1YLR005W CWC23P52868 283 aaPredicted RBP2.81□□□□□ -1.96
SSL1YLR005W HST4P53688 370 aa2.81□□□□□ -1.96
SSL1YLR005W LSM7P53905 115 aaKnown RBP2.81□□□□□ -1.96
SSL1YLR005W VPS28Q02767 242 aa2.81□□□□□ -1.96
SSL1YLR005W YMR090WQ04304 227 aaKnown RBP2.81□□□□□ -1.96
SSL1YLR005W LOA1Q06508 300 aa2.81□□□□□ -1.96
SSL1YLR005W RDI1Q12434 202 aa2.81□□□□□ -1.96
SSL1YLR005W AIM45Q12480 344 aaKnown RBP2.81□□□□□ -1.96
SSL1YLR005W TFB5Q3E7C1 72 aaPredicted RBP2.81□□□□□ -1.96
SSL1YLR005W YOR011W-AQ3E807 68 aa2.81□□□□□ -1.96
SSL1YLR005W SAL1D6W196 494 aa2.8□□□□□ -1.96
SSL1YLR005W PIS1P06197 220 aaKnown RBP2.8□□□□□ -1.96
SSL1YLR005W RPS11AP0CX47 156 aaKnown RBP2.8□□□□□ -1.96
SSL1YLR005W RPS11BP0CX48 156 aaKnown RBP2.8□□□□□ -1.96
SSL1YLR005W FCY2P17064 533 aa2.8□□□□□ -1.96
SSL1YLR005W SEC22P22214 214 aa2.8□□□□□ -1.96
SSL1YLR005W ECM25P32525 599 aa2.8□□□□□ -1.96
SSL1YLR005W YPC1P38298 316 aa2.8□□□□□ -1.96
SSL1YLR005W RRF1P38771 230 aa2.8□□□□□ -1.96
SSL1YLR005W RPR2P40571 144 aa2.8□□□□□ -1.96
SSL1YLR005W YIR035CP40579 254 aa2.8□□□□□ -1.96
SSL1YLR005W IMP2P46972 177 aa2.8□□□□□ -1.96
SSL1YLR005W YJR015WP47090 510 aa2.8□□□□□ -1.96
SSL1YLR005W LST7P53237 242 aa2.8□□□□□ -1.96
SSL1YLR005W PDR17P53844 350 aa2.8□□□□□ -1.96
SSL1YLR005W YPL264CQ08980 353 aa2.8□□□□□ -1.96
SSL1YLR005W YCR075W-AQ3E830 75 aa2.8□□□□□ -1.96
SSL1YLR005W ISN1Q99312 450 aa2.8□□□□□ -1.96
SSL1YLR005W ARG80P07249 177 aa2.79□□□□□ -1.96
SSL1YLR005W YHR213WP0CI67 198 aa2.79□□□□□ -1.96
SSL1YLR005W NHP6BP11633 99 aaKnown RBP2.79□□□□□ -1.96
SSL1YLR005W SPT14P32363 452 aa2.79□□□□□ -1.96
SSL1YLR005W GAT4P40569 121 aa2.79□□□□□ -1.96
SSL1YLR005W PKP2P53170 491 aa2.79□□□□□ -1.96
SSL1YLR005W HCH1P53834 153 aa2.79□□□□□ -1.96
SSL1YLR005W YIF1P53845 314 aaKnown RBP2.79□□□□□ -1.96
SSL1YLR005W PRM7Q12459 698 aa2.79□□□□□ -1.96
SSL1YLR005W TPI1P00942 248 aaKnown RBP2.78□□□□□ -1.96
SSL1YLR005W PHD1P36093 366 aa2.78□□□□□ -1.96
SSL1YLR005W SAS2P40963 338 aa2.78□□□□□ -1.96
SSL1YLR005W MIC27P50945 234 aa2.78□□□□□ -1.96
SSL1YLR005W GPI15P53961 229 aa2.78□□□□□ -1.96
SSL1YLR005W ODC1Q03028 310 aa2.78□□□□□ -1.96
Retrieved 100 of 5,963 RNA–protein pairs in 16.4 ms