RNA–Protein interactions for RNA: YKR081C

RPF2, Transcript of Essential protein involved in rRNA maturation and ribosomal assembly, yeastyeast

Gene RPF2, Length 1,035 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPF2YKR081C GPI17Q04080 534 aa1.38□□□□□ -2.19
RPF2YKR081C YMR315WQ04869 349 aaKnown RBP1.38□□□□□ -2.19
RPF2YKR081C GRX8Q05926 109 aa1.38□□□□□ -2.19
RPF2YKR081C MCP1Q12106 302 aa1.38□□□□□ -2.19
RPF2YKR081C YOR214CQ12282 236 aa1.38□□□□□ -2.19
RPF2YKR081C ATP14Q12349 124 aa1.38□□□□□ -2.19
RPF2YKR081C GTT2Q12390 233 aa1.38□□□□□ -2.19
RPF2YKR081C SIN3P22579 1536 aa1.38□□□□□ -2.19
RPF2YKR081C HSL1P34244 1518 aa1.38□□□□□ -2.19
RPF2YKR081C LTE1P07866 1435 aa1.38□□□□□ -2.19
RPF2YKR081C SLH1P53327 1967 aaKnown RBP1.38□□□□□ -2.19
RPF2YKR081C MMS22Q06164 1454 aa1.37□□□□□ -2.19
RPF2YKR081C LYS2P07702 1392 aa1.37□□□□□ -2.19
RPF2YKR081C HAP2P06774 265 aa1.37□□□□□ -2.19
RPF2YKR081C YER039C-AP0CD97 72 aa1.37□□□□□ -2.19
RPF2YKR081C STF2P16965 84 aa1.37□□□□□ -2.19
RPF2YKR081C IDP1P21954 428 aaKnown RBP1.37□□□□□ -2.19
RPF2YKR081C MAG1P22134 296 aaKnown RBP1.37□□□□□ -2.19
RPF2YKR081C TRR1P29509 319 aaKnown RBP1.37□□□□□ -2.19
RPF2YKR081C UTP30P36144 274 aaKnown RBP1.37□□□□□ -2.19
RPF2YKR081C YBR285WP38354 144 aa1.37□□□□□ -2.19
RPF2YKR081C YPT31P38555 223 aaKnown RBP1.37□□□□□ -2.19
RPF2YKR081C IPI1P38803 334 aaPredicted RBP1.37□□□□□ -2.19
RPF2YKR081C IKI1P38874 309 aa1.37□□□□□ -2.19
RPF2YKR081C ADO1P47143 340 aaKnown RBP1.37□□□□□ -2.19
RPF2YKR081C DIE2P50076 525 aa1.37□□□□□ -2.19
RPF2YKR081C YGR017WP53210 297 aa1.37□□□□□ -2.19
RPF2YKR081C TIM13P53299 105 aa1.37□□□□□ -2.19
RPF2YKR081C YCL001W-AP87012 153 aa1.37□□□□□ -2.19
RPF2YKR081C SHH3Q04487 196 aa1.37□□□□□ -2.19
RPF2YKR081C SEN15Q04675 128 aa1.37□□□□□ -2.19
RPF2YKR081C YMR253CQ04835 414 aa1.37□□□□□ -2.19
RPF2YKR081C YDR278CQ05612 105 aa1.37□□□□□ -2.19
RPF2YKR081C RNH202Q05635 350 aa1.37□□□□□ -2.19
RPF2YKR081C ZEO1Q08245 113 aa1.37□□□□□ -2.19
RPF2YKR081C YPR202WQ08993 238 aa1.37□□□□□ -2.19
RPF2YKR081C RDI1Q12434 202 aa1.37□□□□□ -2.19
RPF2YKR081C EFG1Q3E705 233 aaKnown RBP1.37□□□□□ -2.19
RPF2YKR081C YCR075W-AQ3E830 75 aa1.37□□□□□ -2.19
RPF2YKR081C THO2P53552 1597 aaKnown RBP1.37□□□□□ -2.19
RPF2YKR081C YIL177CP40434 1758 aa1.36□□□□□ -2.19
RPF2YKR081C YJL225CP40889 1758 aa1.36□□□□□ -2.19
RPF2YKR081C ROM2P51862 1356 aaKnown RBP1.36□□□□□ -2.19
RPF2YKR081C MYO2P19524 1574 aaKnown RBP1.36□□□□□ -2.19
RPF2YKR081C MRPL44P19956 98 aa1.36□□□□□ -2.19
RPF2YKR081C APS1P35181 156 aa1.36□□□□□ -2.19
RPF2YKR081C PDS1P40316 373 aaPredicted RBP1.36□□□□□ -2.19
RPF2YKR081C MOB1P40484 314 aa1.36□□□□□ -2.19
RPF2YKR081C GLR1P41921 483 aaKnown RBP1.36□□□□□ -2.19
RPF2YKR081C BXI1P48558 297 aa1.36□□□□□ -2.19
RPF2YKR081C RPL37AP49166 88 aaKnown RBP1.36□□□□□ -2.19
RPF2YKR081C ERV14P53173 138 aa1.36□□□□□ -2.19
RPF2YKR081C HHO1P53551 258 aa1.36□□□□□ -2.19
RPF2YKR081C FMN1Q03778 218 aa1.36□□□□□ -2.19
RPF2YKR081C PST2Q12335 198 aaKnown RBP1.36□□□□□ -2.19
RPF2YKR081C YIR021W-AQ3E739 70 aa1.36□□□□□ -2.19
RPF2YKR081C YLR099W-AQ3E798 87 aa1.36□□□□□ -2.19
RPF2YKR081C TY1B-PR2P0C2J0 1756 aa1.36□□□□□ -2.19
RPF2YKR081C GEA2P39993 1459 aaKnown RBP1.36□□□□□ -2.19
RPF2YKR081C KRE5P22023 1365 aa1.35□□□□□ -2.19
RPF2YKR081C SSK2P53599 1579 aa1.35□□□□□ -2.19
RPF2YKR081C GEA1P47102 1408 aaPredicted RBP1.35□□□□□ -2.19
RPF2YKR081C YLR419WQ06698 1435 aaKnown RBP1.35□□□□□ -2.19
RPF2YKR081C YLR236CA0A023PZG4 107 aa1.35□□□□□ -2.19
RPF2YKR081C SPS2P08459 502 aa1.35□□□□□ -2.19
RPF2YKR081C MGT1P26188 188 aa1.35□□□□□ -2.19
RPF2YKR081C SUA7P29055 345 aaPredicted RBP1.35□□□□□ -2.19
RPF2YKR081C MRP49P32388 137 aa1.35□□□□□ -2.19
RPF2YKR081C YKR070WP36151 352 aaKnown RBP1.35□□□□□ -2.19
RPF2YKR081C TRM5P38793 499 aa1.35□□□□□ -2.19
RPF2YKR081C YEL067CP39978 195 aa1.35□□□□□ -2.19
RPF2YKR081C SNU13P39990 126 aaKnown RBP1.35□□□□□ -2.19
RPF2YKR081C CCS1P40202 249 aaKnown RBP1.35□□□□□ -2.19
RPF2YKR081C RPS12P48589 143 aaKnown RBP1.35□□□□□ -2.19
RPF2YKR081C ARO8P53090 500 aaKnown RBP1.35□□□□□ -2.19
RPF2YKR081C HHT1P61830 136 aa1.35□□□□□ -2.19
RPF2YKR081C TMA23Q03525 211 aa1.35□□□□□ -2.19
RPF2YKR081C GAL83Q04739 417 aa1.35□□□□□ -2.19
RPF2YKR081C PRP11Q07350 266 aaPredicted RBP1.35□□□□□ -2.19
RPF2YKR081C RAD28Q12021 506 aa1.35□□□□□ -2.19
RPF2YKR081C YLR050CQ12155 161 aaKnown RBP1.35□□□□□ -2.19
RPF2YKR081C SLO1Q3E784 85 aa1.35□□□□□ -2.19
RPF2YKR081C YHR213W-AQ8TGT4 77 aa1.35□□□□□ -2.19
RPF2YKR081C YOR1P53049 1477 aa1.35□□□□□ -2.19
RPF2YKR081C NUP170P38181 1502 aa1.35□□□□□ -2.19
RPF2YKR081C RSF2P46974 1380 aa1.34□□□□□ -2.19
RPF2YKR081C ATG2P53855 1592 aa1.34□□□□□ -2.19
RPF2YKR081C TY1B-HO13535 1793 aa1.34□□□□□ -2.19
RPF2YKR081C TY1B-DR5P0C2I2 1755 aa1.34□□□□□ -2.19
RPF2YKR081C TY1B-DR6P0C2I3 1755 aa1.34□□□□□ -2.19
RPF2YKR081C TY1B-LR2P0C2I5 1755 aa1.34□□□□□ -2.19
RPF2YKR081C TY1B-LR3P0C2I6 1755 aaKnown RBP1.34□□□□□ -2.19
RPF2YKR081C TY1B-PR1P0C2I9 1755 aaKnown RBP1.34□□□□□ -2.19
RPF2YKR081C TY1B-PR3P0C2J1 1755 aaKnown RBP1.34□□□□□ -2.19
RPF2YKR081C TY1B-JR1P47098 1755 aa1.34□□□□□ -2.19
RPF2YKR081C TY1B-ML2Q03434 1755 aaKnown RBP1.34□□□□□ -2.19
RPF2YKR081C TY1B-ER1Q03612 1755 aa1.34□□□□□ -2.19
RPF2YKR081C TY1B-ML1Q04711 1755 aaKnown RBP1.34□□□□□ -2.19
RPF2YKR081C TY1B-GR2Q12269 1755 aa1.34□□□□□ -2.19
RPF2YKR081C TY1B-OLQ12273 1755 aa1.34□□□□□ -2.19
Retrieved 100 of 5,963 RNA–protein pairs in 188 ms