RNA–Protein interactions for RNA: YKL173W

SNU114, Transcript of GTPase component of U5 snRNP involved in mRNA splicing via spliceosome, yeastyeast

Gene SNU114, Length 3,027 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNU114YKL173W AIF1P52923 378 aa1.81□□□□□ -2.12
SNU114YKL173W YOL160WQ08321 113 aa1.81□□□□□ -2.12
SNU114YKL173W YLR118CQ12354 227 aa1.81□□□□□ -2.12
SNU114YKL173W FMP49A0A023PZB3 126 aa1.81□□□□□ -2.12
SNU114YKL173W SIR2P06700 562 aa1.81□□□□□ -2.12
SNU114YKL173W SNF4P12904 322 aa1.81□□□□□ -2.12
SNU114YKL173W MAG1P22134 296 aaKnown RBP1.81□□□□□ -2.12
SNU114YKL173W PEX34P25584 144 aa1.81□□□□□ -2.12
SNU114YKL173W SNC2P33328 115 aa1.81□□□□□ -2.12
SNU114YKL173W RPL14AP36105 138 aaKnown RBP1.81□□□□□ -2.12
SNU114YKL173W RPL14BP38754 138 aaKnown RBP1.81□□□□□ -2.12
SNU114YKL173W RRT13P40042 185 aa1.81□□□□□ -2.12
SNU114YKL173W YDR366CP87287 132 aa1.81□□□□□ -2.12
SNU114YKL173W OCA6Q12454 224 aa1.81□□□□□ -2.12
SNU114YKL173W HKR1P41809 1802 aa1.81□□□□□ -2.12
SNU114YKL173W SEN1Q00416 2231 aaKnown RBP1.8□□□□□ -2.12
SNU114YKL173W HAP2P06774 265 aa1.8□□□□□ -2.12
SNU114YKL173W PRE1P22141 198 aaKnown RBP1.8□□□□□ -2.12
SNU114YKL173W RCN1P36054 211 aa1.8□□□□□ -2.12
SNU114YKL173W SHB17P36136 271 aaKnown RBP1.8□□□□□ -2.12
SNU114YKL173W ETR1P38071 380 aa1.8□□□□□ -2.12
SNU114YKL173W BUD13P46947 266 aaPredicted RBP1.8□□□□□ -2.12
SNU114YKL173W OST2P46964 130 aa1.8□□□□□ -2.12
SNU114YKL173W AIM36Q03798 255 aa1.8□□□□□ -2.12
SNU114YKL173W COA4Q05809 96 aa1.8□□□□□ -2.12
SNU114YKL173W PIN3Q06449 215 aa1.8□□□□□ -2.12
SNU114YKL173W RPL30P14120 105 aaKnown RBP1.8□□□□□ -2.12
SNU114YKL173W SKG1P36169 355 aa1.8□□□□□ -2.12
SNU114YKL173W EDC2P40023 145 aaPredicted RBP1.8□□□□□ -2.12
SNU114YKL173W YFR054CP43622 192 aa1.8□□□□□ -2.12
SNU114YKL173W SFT1P43682 97 aa1.8□□□□□ -2.12
SNU114YKL173W FIP1P45976 327 aa1.8□□□□□ -2.12
SNU114YKL173W TTI2P47168 421 aa1.8□□□□□ -2.12
SNU114YKL173W YGL088WP53151 121 aa1.8□□□□□ -2.12
SNU114YKL173W TVP18Q04767 167 aa1.8□□□□□ -2.12
SNU114YKL173W RNH202Q05635 350 aa1.8□□□□□ -2.12
SNU114YKL173W GEP5Q12393 293 aa1.8□□□□□ -2.12
SNU114YKL173W YPL247CQ12523 523 aa1.8□□□□□ -2.12
SNU114YKL173W ANB1P19211 157 aa1.8□□□□□ -2.12
SNU114YKL173W CCA1P21269 546 aa1.8□□□□□ -2.12
SNU114YKL173W SEC17P32602 292 aa1.8□□□□□ -2.12
SNU114YKL173W IRC22P40006 225 aa1.8□□□□□ -2.12
SNU114YKL173W AVT6P40074 448 aa1.8□□□□□ -2.12
SNU114YKL173W YER181CP40097 107 aa1.8□□□□□ -2.12
SNU114YKL173W ERV29P53337 310 aa1.8□□□□□ -2.12
SNU114YKL173W GOT1Q03554 138 aa1.8□□□□□ -2.12
SNU114YKL173W YPS3Q12303 508 aa1.8□□□□□ -2.12
SNU114YKL173W DGK1Q12382 290 aa1.8□□□□□ -2.12
SNU114YKL173W GTT2Q12390 233 aa1.8□□□□□ -2.12
SNU114YKL173W CCH1P50077 2039 aa1.79□□□□□ -2.12
SNU114YKL173W IRA1P18963 3092 aa1.79□□□□□ -2.12
SNU114YKL173W ERG2P32352 222 aa1.79□□□□□ -2.12
SNU114YKL173W SKI6P46948 246 aaPredicted RBP1.79□□□□□ -2.12
SNU114YKL173W YJL028WP47062 111 aa1.79□□□□□ -2.12
SNU114YKL173W MDM34P53083 459 aa1.79□□□□□ -2.12
SNU114YKL173W APJ1P53940 528 aa1.79□□□□□ -2.12
SNU114YKL173W MRPS16Q02608 121 aa1.79□□□□□ -2.12
SNU114YKL173W MEU1Q07938 337 aaKnown RBP RIP-Chip data1.79□□□□□ -2.12not detected
SNU114YKL173W ATO3Q12359 275 aa1.79□□□□□ -2.12
SNU114YKL173W YCR075W-AQ3E830 75 aa1.79□□□□□ -2.12
SNU114YKL173W MBF1O14467 151 aaKnown RBP1.79□□□□□ -2.12
SNU114YKL173W RPE1P46969 238 aa1.79□□□□□ -2.12
SNU114YKL173W SWT21P53873 357 aaPredicted RBP1.79□□□□□ -2.12
SNU114YKL173W YMR099CQ03161 297 aaKnown RBP1.79□□□□□ -2.12
SNU114YKL173W TMC1Q08422 150 aaPredicted RBP1.79□□□□□ -2.12
SNU114YKL173W YBL008W-AQ3E821 79 aa1.79□□□□□ -2.12
SNU114YKL173W FLO11P08640 1367 aa1.79□□□□□ -2.12
SNU114YKL173W FAB1P34756 2278 aa1.79□□□□□ -2.12
SNU114YKL173W YLR462WO13556 202 aa1.78□□□□□ -2.12
SNU114YKL173W Q0255P03881 472 aa1.78□□□□□ -2.12
SNU114YKL173W ECM31P38122 312 aa1.78□□□□□ -2.12
SNU114YKL173W YHR140WP38842 239 aa1.78□□□□□ -2.12
SNU114YKL173W RPB11P38902 120 aa1.78□□□□□ -2.12
SNU114YKL173W ASP1P38986 381 aaPredicted RBP1.78□□□□□ -2.12
SNU114YKL173W TDA4P47153 279 aa1.78□□□□□ -2.12
SNU114YKL173W YNL033WP53964 284 aa1.78□□□□□ -2.12
SNU114YKL173W YNL019CP53975 284 aa1.78□□□□□ -2.12
SNU114YKL173W YPR114WQ06107 315 aa1.78□□□□□ -2.12
SNU114YKL173W NAT3Q06504 195 aa1.78□□□□□ -2.12
SNU114YKL173W SPT14P32363 452 aa1.78□□□□□ -2.12
SNU114YKL173W YOR062CP36025 268 aa1.78□□□□□ -2.12
SNU114YKL173W MSA2P36157 363 aa1.78□□□□□ -2.12
SNU114YKL173W SPL2P38839 148 aa1.78□□□□□ -2.12
SNU114YKL173W AST2P39945 430 aaKnown RBP1.78□□□□□ -2.12
SNU114YKL173W CAT5P41735 233 aa1.78□□□□□ -2.12
SNU114YKL173W GON7P46984 123 aa1.78□□□□□ -2.12
SNU114YKL173W YGL118CP53132 145 aa1.78□□□□□ -2.12
SNU114YKL173W AIM11P87275 137 aa1.78□□□□□ -2.12
SNU114YKL173W RSM10Q03201 203 aa1.78□□□□□ -2.12
SNU114YKL173W GRH1Q04410 372 aaKnown RBP1.78□□□□□ -2.12
SNU114YKL173W YDL211CQ12121 372 aa1.78□□□□□ -2.12
SNU114YKL173W YNL277W-AQ3E7Z0 62 aa1.78□□□□□ -2.12
SNU114YKL173W YHR214C-EQ8TGK0 99 aa1.78□□□□□ -2.12
SNU114YKL173W SAS5Q99314 248 aa1.78□□□□□ -2.12
SNU114YKL173W SOD1P00445 154 aaKnown RBP1.77□□□□□ -2.13
SNU114YKL173W MRPL39P36533 70 aa1.77□□□□□ -2.13
SNU114YKL173W GPI18P38211 433 aa1.77□□□□□ -2.13
SNU114YKL173W ERV15P38312 142 aa1.77□□□□□ -2.13
SNU114YKL173W PHO89P38361 574 aa1.77□□□□□ -2.13
SNU114YKL173W YEA6P39953 335 aa1.77□□□□□ -2.13
Retrieved 100 of 5,963 RNA–protein pairs in 25.6 ms