RNA–Protein interactions for RNA: YIL030C

SSM4, Transcript of Ubiquitin-protein ligase involved in ER-associated protein degradation, yeastyeast

Gene SSM4, Length 3,960 nt, Biotype protein coding, Subcellular localisation Mitochondria .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSM4YIL030C YNR061CP53747 219 aa2.93□□□□□ -1.94
SSM4YIL030C COX12Q01519 83 aa2.93□□□□□ -1.94
SSM4YIL030C MRX11Q03079 207 aa2.93□□□□□ -1.94
SSM4YIL030C VPS71Q03433 280 aa2.93□□□□□ -1.94
SSM4YIL030C YMR254CQ04838 102 aa2.93□□□□□ -1.94
SSM4YIL030C MTC6P38849 526 aa2.92□□□□□ -1.94
SSM4YIL030C DFG10P40526 253 aa2.92□□□□□ -1.94
SSM4YIL030C SPG5P42933 373 aa2.92□□□□□ -1.94
SSM4YIL030C LCB3P47013 409 aa2.92□□□□□ -1.94
SSM4YIL030C YJL027CP47063 138 aaPredicted RBP2.92□□□□□ -1.94
SSM4YIL030C YJR096WP47137 282 aa2.92□□□□□ -1.94
SSM4YIL030C NAT5Q08689 176 aa2.92□□□□□ -1.94
SSM4YIL030C FCY22Q12119 530 aa2.92□□□□□ -1.94
SSM4YIL030C YIL102C-AQ2V2P5 75 aa2.92□□□□□ -1.94
SSM4YIL030C FMO1P38866 432 aa2.92□□□□□ -1.94
SSM4YIL030C YNR048WP53740 393 aa2.92□□□□□ -1.94
SSM4YIL030C SNO2P53823 222 aa2.92□□□□□ -1.94
SSM4YIL030C PAM18Q07914 168 aa2.92□□□□□ -1.94
SSM4YIL030C YPR014CQ6B0W2 109 aa2.92□□□□□ -1.94
SSM4YIL030C MRPL31P14063 131 aaPredicted RBP2.92□□□□□ -1.94
SSM4YIL030C YKR041WP36134 250 aa2.92□□□□□ -1.94
SSM4YIL030C UTH1P36135 365 aa2.92□□□□□ -1.94
SSM4YIL030C DOG1P38774 246 aa2.92□□□□□ -1.94
SSM4YIL030C YIL029CP40538 142 aa2.92□□□□□ -1.94
SSM4YIL030C YPL039WQ03080 316 aa2.92□□□□□ -1.94
SSM4YIL030C SDH7Q04401 133 aa2.92□□□□□ -1.94
SSM4YIL030C RDL2Q08742 149 aaKnown RBP2.92□□□□□ -1.94
SSM4YIL030C FIT2Q08906 153 aa2.92□□□□□ -1.94
SSM4YIL030C DYN1P36022 4092 aa2.91□□□□□ -1.94
SSM4YIL030C NOP1P15646 327 aaKnown RBP2.91□□□□□ -1.94
SSM4YIL030C ELF1P36053 145 aa2.91□□□□□ -1.94
SSM4YIL030C FAF1P40546 346 aaPredicted RBP2.91□□□□□ -1.94
SSM4YIL030C CUP9P41817 306 aa2.91□□□□□ -1.94
SSM4YIL030C RPN14P53196 417 aa2.91□□□□□ -1.94
SSM4YIL030C ARR3Q06598 404 aa2.91□□□□□ -1.94
SSM4YIL030C HMX1P32339 317 aa2.91□□□□□ -1.94
SSM4YIL030C MCH2P36032 473 aa2.91□□□□□ -1.94
SSM4YIL030C YHL044WP38727 235 aa2.91□□□□□ -1.94
SSM4YIL030C AYT1Q12226 474 aa2.91□□□□□ -1.94
SSM4YIL030C COX5BP00425 151 aa2.91□□□□□ -1.94
SSM4YIL030C YPT1P01123 206 aaKnown RBP2.91□□□□□ -1.94
SSM4YIL030C HAP3P13434 144 aa2.91□□□□□ -1.94
SSM4YIL030C DER1P38307 211 aa2.91□□□□□ -1.94
SSM4YIL030C HAC1P41546 238 aa2.91□□□□□ -1.94
SSM4YIL030C ELA1P53861 379 aaPredicted RBP2.91□□□□□ -1.94
SSM4YIL030C ATG4P53867 494 aa2.91□□□□□ -1.94
SSM4YIL030C GAT3Q07928 141 aa2.91□□□□□ -1.94
SSM4YIL030C ISU2Q12056 156 aa2.91□□□□□ -1.94
SSM4YIL030C ATO3Q12359 275 aa2.91□□□□□ -1.94
SSM4YIL030C REC104P33323 182 aa2.9□□□□□ -1.94
SSM4YIL030C YKL075CP36083 450 aa2.9□□□□□ -1.94
SSM4YIL030C YKR045CP36138 183 aa2.9□□□□□ -1.94
SSM4YIL030C YER076CP40049 302 aa2.9□□□□□ -1.94
SSM4YIL030C CWC27Q02770 301 aa2.9□□□□□ -1.94
SSM4YIL030C YMR007WQ03675 126 aa2.9□□□□□ -1.94
SSM4YIL030C GIM5Q04493 163 aa2.9□□□□□ -1.94
SSM4YIL030C YOR186WQ08560 144 aa2.9□□□□□ -1.94
SSM4YIL030C FSF1Q12029 327 aaKnown RBP2.9□□□□□ -1.94
SSM4YIL030C RPS14AP06367 137 aaKnown RBP2.9□□□□□ -1.95
SSM4YIL030C YHR213WP0CI67 198 aa2.9□□□□□ -1.95
SSM4YIL030C ELO2P25358 347 aa2.9□□□□□ -1.95
SSM4YIL030C RPS14BP39516 138 aaKnown RBP2.9□□□□□ -1.95
SSM4YIL030C YEL067CP39978 195 aa2.9□□□□□ -1.95
SSM4YIL030C SHR5P41912 237 aa2.9□□□□□ -1.95
SSM4YIL030C YGR219WP53307 113 aa2.9□□□□□ -1.95
SSM4YIL030C PDR16P53860 351 aaKnown RBP2.9□□□□□ -1.95
SSM4YIL030C GIC2Q06648 383 aa2.9□□□□□ -1.95
SSM4YIL030C YDL218WQ07629 317 aa2.9□□□□□ -1.95
SSM4YIL030C DFM1Q12743 341 aaKnown RBP2.9□□□□□ -1.95
SSM4YIL030C FCY2P17064 533 aa2.9□□□□□ -1.95
SSM4YIL030C ECM14P38836 430 aa2.9□□□□□ -1.95
SSM4YIL030C RPB11P38902 120 aa2.9□□□□□ -1.95
SSM4YIL030C TOS6P48560 102 aa2.9□□□□□ -1.95
SSM4YIL030C YGL118CP53132 145 aa2.9□□□□□ -1.95
SSM4YIL030C SUR7P54003 302 aa2.9□□□□□ -1.95
SSM4YIL030C YMR090WQ04304 227 aaKnown RBP2.9□□□□□ -1.95
SSM4YIL030C YOR105WQ08504 108 aa2.9□□□□□ -1.95
SSM4YIL030C STE18P18852 110 aa2.89□□□□□ -1.95
SSM4YIL030C LYS1P38998 373 aaRIP-Chip data2.89□□□□□ -1.95not detected
SSM4YIL030C GAT4P40569 121 aa2.89□□□□□ -1.95
SSM4YIL030C DSK2P48510 373 aa2.89□□□□□ -1.95
SSM4YIL030C RRS1Q08746 203 aaKnown RBP2.89□□□□□ -1.95
SSM4YIL030C ISD11Q6Q560 94 aa2.89□□□□□ -1.95
SSM4YIL030C MDM10P18409 493 aa2.89□□□□□ -1.95
SSM4YIL030C PCL1P24867 279 aa2.89□□□□□ -1.95
SSM4YIL030C TAF4P50105 388 aa2.89□□□□□ -1.95
SSM4YIL030C MOT3P54785 490 aaKnown RBP2.89□□□□□ -1.95
SSM4YIL030C YLR342W-AQ3E810 57 aa2.89□□□□□ -1.95
SSM4YIL030C SEC4P07560 215 aaKnown RBP2.89□□□□□ -1.95
SSM4YIL030C FEN2P25621 512 aaKnown RBP2.89□□□□□ -1.95
SSM4YIL030C YHR138CP38841 114 aaPredicted RBP2.89□□□□□ -1.95
SSM4YIL030C YNL200CP40165 246 aaKnown RBP2.89□□□□□ -1.95
SSM4YIL030C ECM18Q04623 453 aa2.89□□□□□ -1.95
SSM4YIL030C PIS1P06197 220 aaKnown RBP2.88□□□□□ -1.95
SSM4YIL030C PFY1P07274 126 aa2.88□□□□□ -1.95
SSM4YIL030C SUN4P53616 420 aa2.88□□□□□ -1.95
SSM4YIL030C YSF3P0C074 85 aaPredicted RBP2.88□□□□□ -1.95
SSM4YIL030C YKR070WP36151 352 aaKnown RBP2.88□□□□□ -1.95
SSM4YIL030C RIB5P38145 238 aa2.88□□□□□ -1.95
SSM4YIL030C DAP1Q12091 152 aa2.88□□□□□ -1.95
Retrieved 100 of 5,963 RNA–protein pairs in 28.9 ms