RNA–Protein interactions for RNA: YHR200W

RPN10, Transcript of Non-ATPase base subunit of the 19S RP of the 26S proteasome, yeastyeast

Gene RPN10, Length 807 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPN10YHR200W MOG1P47123 218 aa11.13□□□□□ -0.63
RPN10YHR200W LOA1Q06508 300 aa11.13□□□□□ -0.63
RPN10YHR200W YOR352WQ08816 343 aa11.13□□□□□ -0.63
RPN10YHR200W MRP2P10663 115 aaPredicted RBP11.12□□□□□ -0.63
RPN10YHR200W MRPS9P38120 278 aa11.12□□□□□ -0.63
RPN10YHR200W SFT2P38166 215 aa11.12□□□□□ -0.63
RPN10YHR200W ICS2P38284 255 aa11.12□□□□□ -0.63
RPN10YHR200W IMD2P38697 523 aaKnown RBP11.12□□□□□ -0.63
RPN10YHR200W CYB5P40312 120 aa11.12□□□□□ -0.63
RPN10YHR200W PBP4Q07362 185 aaKnown RBP11.12□□□□□ -0.63
RPN10YHR200W RXT3Q07458 294 aa11.12□□□□□ -0.63
RPN10YHR200W LSM4P40070 187 aaKnown RBP11.11□□□□□ -0.63
RPN10YHR200W DSK2P48510 373 aa11.11□□□□□ -0.63
RPN10YHR200W SPG4Q04438 115 aa11.11□□□□□ -0.63
RPN10YHR200W TY1A-BRQ12217 440 aa11.11□□□□□ -0.63
RPN10YHR200W ERV2Q12284 196 aa11.11□□□□□ -0.63
RPN10YHR200W UTP20P35194 2493 aaKnown RBP11.1□□□□□ -0.63
RPN10YHR200W POP5P28005 173 aa11.1□□□□□ -0.63
RPN10YHR200W YPS1P32329 569 aa11.1□□□□□ -0.63
RPN10YHR200W HST4P53688 370 aa11.1□□□□□ -0.63
RPN10YHR200W SWT21P53873 357 aaPredicted RBP11.1□□□□□ -0.63
RPN10YHR200W YOR097CQ12274 175 aaPredicted RBP11.1□□□□□ -0.63
RPN10YHR200W URA2P07259 2214 aaKnown RBP11.1□□□□□ -0.63
RPN10YHR200W CCW14O13547 238 aa11.09□□□□□ -0.63
RPN10YHR200W COX2P00410 251 aa11.09□□□□□ -0.63
RPN10YHR200W RPB3P16370 318 aaKnown RBP11.09□□□□□ -0.63
RPN10YHR200W RNA15P25299 296 aaPredicted RBP11.09□□□□□ -0.63
RPN10YHR200W INO2P26798 304 aa11.09□□□□□ -0.63
RPN10YHR200W RPS0AP32905 252 aaKnown RBP11.09□□□□□ -0.63
RPN10YHR200W HSP10P38910 106 aa11.09□□□□□ -0.63
RPN10YHR200W MRX11Q03079 207 aa11.09□□□□□ -0.63
RPN10YHR200W ATG8P38182 117 aaRIP-Chip data11.08□□□□□ -0.64not detected
RPN10YHR200W HAM1P47119 197 aaKnown RBP11.08□□□□□ -0.64
RPN10YHR200W CPD1P53314 239 aa11.08□□□□□ -0.64
RPN10YHR200W PET494P07390 489 aaPredicted RBP11.07□□□□□ -0.64
RPN10YHR200W BNS1P50084 137 aa11.07□□□□□ -0.64
RPN10YHR200W MGA1P53050 456 aa11.07□□□□□ -0.64
RPN10YHR200W VMA21P41806 77 aa11.06□□□□□ -0.64
RPN10YHR200W YGR219WP53307 113 aa11.06□□□□□ -0.64
RPN10YHR200W CAB4P53332 305 aa11.06□□□□□ -0.64
RPN10YHR200W DAD3P69850 94 aa11.06□□□□□ -0.64
RPN10YHR200W YLR118CQ12354 227 aa11.06□□□□□ -0.64
RPN10YHR200W TY1A-DR4O74302 440 aa11.05□□□□□ -0.64
RPN10YHR200W TY1A-AP0CX57 440 aa11.05□□□□□ -0.64
RPN10YHR200W TY1A-PR1P0CX58 440 aa11.05□□□□□ -0.64
RPN10YHR200W TY1A-ORP0CX59 440 aa11.05□□□□□ -0.64
RPN10YHR200W TY1A-PR2P0CX60 440 aa11.05□□□□□ -0.64
RPN10YHR200W TY1A-DR5P0CX65 440 aa11.05□□□□□ -0.64
RPN10YHR200W TY1A-ER2P0CX66 440 aa11.05□□□□□ -0.64
RPN10YHR200W TY1A-GR3P0CX67 440 aa11.05□□□□□ -0.64
RPN10YHR200W TY1A-LR1P0CX68 440 aa11.05□□□□□ -0.64
RPN10YHR200W TY1A-MR2P0CX69 440 aa11.05□□□□□ -0.64
RPN10YHR200W YHR173CP38864 112 aa11.05□□□□□ -0.64
RPN10YHR200W POR2P40478 281 aa11.05□□□□□ -0.64
RPN10YHR200W PAU15P40585 124 aa11.05□□□□□ -0.64
RPN10YHR200W GPI2P46961 280 aa11.05□□□□□ -0.64
RPN10YHR200W TY1A-JR2P47099 440 aa11.05□□□□□ -0.64
RPN10YHR200W OCA2P53949 197 aa11.05□□□□□ -0.64
RPN10YHR200W TY1A-DR1Q03856 440 aa11.05□□□□□ -0.64
RPN10YHR200W TY1A-ML1Q04706 440 aaKnown RBP11.05□□□□□ -0.64
RPN10YHR200W HOR7Q05827 59 aa11.05□□□□□ -0.64
RPN10YHR200W LDS2Q08218 356 aa11.05□□□□□ -0.64
RPN10YHR200W IRC23Q08416 157 aa11.05□□□□□ -0.64
RPN10YHR200W TIM18Q08749 192 aa11.05□□□□□ -0.64
RPN10YHR200W SNU23Q12368 194 aaPredicted RBP11.05□□□□□ -0.64
RPN10YHR200W TY1A-NL2Q12470 440 aa11.05□□□□□ -0.64
RPN10YHR200W TY1A-GR2Q12485 440 aa11.05□□□□□ -0.64
RPN10YHR200W YPR145C-AQ2V2P0 78 aa11.05□□□□□ -0.64
RPN10YHR200W MIC12P38341 106 aa11.04□□□□□ -0.64
RPN10YHR200W WWM1P43582 211 aaKnown RBP11.04□□□□□ -0.64
RPN10YHR200W VPS55P47111 140 aa11.04□□□□□ -0.64
RPN10YHR200W FIT2Q08906 153 aa11.04□□□□□ -0.64
RPN10YHR200W AYT1Q12226 474 aa11.04□□□□□ -0.64
RPN10YHR200W CYC3P06182 269 aa11.03□□□□□ -0.64
RPN10YHR200W NTF2P33331 125 aaKnown RBP11.03□□□□□ -0.64
RPN10YHR200W YNL194CP40169 301 aa11.03□□□□□ -0.64
RPN10YHR200W APS2Q00381 147 aa11.03□□□□□ -0.64
RPN10YHR200W YHR213WP0CI67 198 aa11.02□□□□□ -0.65
RPN10YHR200W COQ3P27680 312 aa11.02□□□□□ -0.65
RPN10YHR200W NNK1P36003 928 aa11.02□□□□□ -0.65
RPN10YHR200W GTT1P40582 234 aa11.02□□□□□ -0.65
RPN10YHR200W UBC7Q02159 165 aa11.02□□□□□ -0.65
RPN10YHR200W ATX2Q12067 313 aa11.02□□□□□ -0.65
RPN10YHR200W FMP49A0A023PZB3 126 aa11.01□□□□□ -0.65
RPN10YHR200W DDI2P0CH63 225 aa11.01□□□□□ -0.65
RPN10YHR200W DDI3P0CH64 225 aa11.01□□□□□ -0.65
RPN10YHR200W TIR2P33890 251 aa11.01□□□□□ -0.65
RPN10YHR200W LSM2P38203 95 aaKnown RBP11.01□□□□□ -0.65
RPN10YHR200W YPI1P43587 155 aa11.01□□□□□ -0.65
RPN10YHR200W TOS8P53147 276 aa11.01□□□□□ -0.65
RPN10YHR200W SMT3Q12306 101 aaKnown RBP11.01□□□□□ -0.65
RPN10YHR200W MRS1P07266 363 aa11□□□□□ -0.65
RPN10YHR200W YJL027CP47063 138 aaPredicted RBP11□□□□□ -0.65
RPN10YHR200W NCE103P53615 221 aa11□□□□□ -0.65
RPN10YHR200W NAT3Q06504 195 aa11□□□□□ -0.65
RPN10YHR200W DCN1Q12395 269 aa11□□□□□ -0.65
RPN10YHR200W YOP1Q12402 180 aa11□□□□□ -0.65
RPN10YHR200W NHP6AP11632 93 aaKnown RBP10.99□□□□□ -0.65
RPN10YHR200W ERS1P17261 260 aa10.99□□□□□ -0.65
RPN10YHR200W SDH4P37298 181 aa10.99□□□□□ -0.65
Retrieved 100 of 5,963 RNA–protein pairs in 37.7 ms