RNA–Protein interactions for RNA: YHR026W

VMA16, Transcript of Subunit c'' of the vacuolar ATPase, yeastyeast

Gene VMA16, Length 642 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VMA16YHR026W YGR035W-AQ45U48 73 aa4.5□□□□□ -1.69
VMA16YHR026W SPO13P23624 291 aa4.49□□□□□ -1.69
VMA16YHR026W CDC50P25656 391 aa4.49□□□□□ -1.69
VMA16YHR026W SPS18P32572 300 aa4.49□□□□□ -1.69
VMA16YHR026W RPL14AP36105 138 aaKnown RBP4.49□□□□□ -1.69
VMA16YHR026W RPL14BP38754 138 aaKnown RBP4.49□□□□□ -1.69
VMA16YHR026W HSP10P38910 106 aa4.49□□□□□ -1.69
VMA16YHR026W YGR269WP40326 108 aa4.49□□□□□ -1.69
VMA16YHR026W RTS2P40962 232 aa4.49□□□□□ -1.69
VMA16YHR026W BNS1P50084 137 aa4.49□□□□□ -1.69
VMA16YHR026W SMM1P53720 384 aaKnown RBP4.49□□□□□ -1.69
VMA16YHR026W WSC2P53832 503 aa4.49□□□□□ -1.69
VMA16YHR026W LPP1Q04396 274 aa4.49□□□□□ -1.69
VMA16YHR026W CTR3Q06686 241 aa4.49□□□□□ -1.69
VMA16YHR026W YGL258W-AQ3E740 77 aa4.49□□□□□ -1.69
VMA16YHR026W RPS25BP0C0T4 108 aaKnown RBP4.48□□□□□ -1.69
VMA16YHR026W YER190C-BP0CX94 160 aa4.48□□□□□ -1.69
VMA16YHR026W YEL077W-AP0CX95 160 aa4.48□□□□□ -1.69
VMA16YHR026W YGR296C-BP0CX96 160 aa4.48□□□□□ -1.69
VMA16YHR026W YPL283W-BP0CX97 160 aa4.48□□□□□ -1.69
VMA16YHR026W YPR204C-AP0CX98 160 aa4.48□□□□□ -1.69
VMA16YHR026W YFL068WP0CX99 160 aa4.48□□□□□ -1.69
VMA16YHR026W YLL066W-AP0CY00 160 aa4.48□□□□□ -1.69
VMA16YHR026W YLL067W-AP0CY01 160 aa4.48□□□□□ -1.69
VMA16YHR026W POF1P25576 258 aa4.48□□□□□ -1.69
VMA16YHR026W ALK2P32789 676 aaPredicted RBP4.48□□□□□ -1.69
VMA16YHR026W NTF2P33331 125 aaKnown RBP4.48□□□□□ -1.69
VMA16YHR026W SUR2P38992 349 aa4.48□□□□□ -1.69
VMA16YHR026W HCH1P53834 153 aa4.48□□□□□ -1.69
VMA16YHR026W RFM1Q12192 310 aa4.48□□□□□ -1.69
VMA16YHR026W RAX2Q12465 1220 aa4.48□□□□□ -1.69
VMA16YHR026W RPS25AQ3E792 108 aaPredicted RBP4.48□□□□□ -1.69
VMA16YHR026W YER175W-AQ8TGU4 54 aa4.48□□□□□ -1.69
VMA16YHR026W RPL9AP05738 191 aaKnown RBP4.47□□□□□ -1.69
VMA16YHR026W FCY2P17064 533 aa4.47□□□□□ -1.69
VMA16YHR026W ELO2P25358 347 aa4.47□□□□□ -1.69
VMA16YHR026W SOR1P35497 357 aaKnown RBP4.47□□□□□ -1.69
VMA16YHR026W YNK1P36010 153 aaKnown RBP4.47□□□□□ -1.69
VMA16YHR026W CTR2P38865 189 aa4.47□□□□□ -1.69
VMA16YHR026W AGE2P40529 298 aa4.47□□□□□ -1.69
VMA16YHR026W SGN1P40561 250 aaKnown RBP RIP-Chip data4.47□□□□□ -1.69not detected
VMA16YHR026W YJL118WP47022 219 aa4.47□□□□□ -1.69
VMA16YHR026W RPL9BP51401 191 aaKnown RBP4.47□□□□□ -1.69
VMA16YHR026W CGR1P53188 120 aa4.47□□□□□ -1.69
VMA16YHR026W RPL21AQ02753 160 aaKnown RBP4.47□□□□□ -1.69
VMA16YHR026W YPL108WQ02872 168 aaPredicted RBP4.47□□□□□ -1.69
VMA16YHR026W AVO2Q04749 426 aa4.47□□□□□ -1.69
VMA16YHR026W SOR2Q07786 357 aa4.47□□□□□ -1.69
VMA16YHR026W YOP1Q12402 180 aa4.47□□□□□ -1.69
VMA16YHR026W RPL21BQ12672 160 aaKnown RBP4.47□□□□□ -1.69
VMA16YHR026W PET494P07390 489 aaPredicted RBP4.46□□□□□ -1.7
VMA16YHR026W RPS22AP0C0W1 130 aaKnown RBP4.46□□□□□ -1.7
VMA16YHR026W PAU19P0CE85 124 aa4.46□□□□□ -1.7
VMA16YHR026W PAU21P0CE86 164 aa4.46□□□□□ -1.7
VMA16YHR026W PAU22P0CE87 164 aa4.46□□□□□ -1.7
VMA16YHR026W NHP6AP11632 93 aaKnown RBP4.46□□□□□ -1.7
VMA16YHR026W URA5P13298 226 aaKnown RBP4.46□□□□□ -1.7
VMA16YHR026W PAU3P25610 124 aa4.46□□□□□ -1.7
VMA16YHR026W FPR2P32472 135 aa4.46□□□□□ -1.7
VMA16YHR026W TCA17P32613 152 aa4.46□□□□□ -1.7
VMA16YHR026W YBL059WP34224 193 aa4.46□□□□□ -1.7
VMA16YHR026W ATP3P38077 311 aaKnown RBP4.46□□□□□ -1.7
VMA16YHR026W LSM8P47093 109 aaKnown RBP4.46□□□□□ -1.7
VMA16YHR026W SSU72P53538 206 aaPredicted RBP4.46□□□□□ -1.7
VMA16YHR026W ATP23P53722 227 aa4.46□□□□□ -1.7
VMA16YHR026W YNR064CP53750 290 aa4.46□□□□□ -1.7
VMA16YHR026W BOR1P53838 576 aa4.46□□□□□ -1.7
VMA16YHR026W FRQ1Q06389 190 aa4.46□□□□□ -1.7
VMA16YHR026W SRL1Q08673 210 aa4.46□□□□□ -1.7
VMA16YHR026W YPR063CQ12160 140 aa4.46□□□□□ -1.7
VMA16YHR026W ERV2Q12284 196 aa4.46□□□□□ -1.7
VMA16YHR026W ATP10P18496 279 aa4.45□□□□□ -1.7
VMA16YHR026W YBR013CP38215 129 aa4.45□□□□□ -1.7
VMA16YHR026W QDR3P38227 689 aa4.45□□□□□ -1.7
VMA16YHR026W NSA2P40078 261 aaKnown RBP4.45□□□□□ -1.7
VMA16YHR026W SAS2P40963 338 aa4.45□□□□□ -1.7
VMA16YHR026W PAU5P43575 122 aa4.45□□□□□ -1.7
VMA16YHR026W LOC1P43586 204 aaPredicted RBP4.45□□□□□ -1.7
VMA16YHR026W MIC27P50945 234 aa4.45□□□□□ -1.7
VMA16YHR026W YGL114WP53134 725 aa4.45□□□□□ -1.7
VMA16YHR026W APS2Q00381 147 aa4.45□□□□□ -1.7
VMA16YHR026W ATC1Q04005 294 aa4.45□□□□□ -1.7
VMA16YHR026W RAD28Q12021 506 aa4.45□□□□□ -1.7
VMA16YHR026W RPL39P04650 51 aa4.44□□□□□ -1.7
VMA16YHR026W TOM40P23644 387 aaKnown RBP4.44□□□□□ -1.7
VMA16YHR026W AVT5P38176 459 aa4.44□□□□□ -1.7
VMA16YHR026W CYB5P40312 120 aa4.44□□□□□ -1.7
VMA16YHR026W DFG10P40526 253 aa4.44□□□□□ -1.7
VMA16YHR026W FYV6P53913 173 aa4.44□□□□□ -1.7
VMA16YHR026W VPS71Q03433 280 aa4.44□□□□□ -1.7
VMA16YHR026W YMR007WQ03675 126 aa4.44□□□□□ -1.7
VMA16YHR026W YDR114CQ04597 100 aa4.44□□□□□ -1.7
VMA16YHR026W POC4Q12245 148 aaPredicted RBP4.44□□□□□ -1.7
VMA16YHR026W YOS1Q3E834 85 aa4.44□□□□□ -1.7
VMA16YHR026W FMP49A0A023PZB3 126 aa4.43□□□□□ -1.7
VMA16YHR026W COQ3P27680 312 aa4.43□□□□□ -1.7
VMA16YHR026W HMX1P32339 317 aa4.43□□□□□ -1.7
VMA16YHR026W GPI18P38211 433 aa4.43□□□□□ -1.7
VMA16YHR026W DER1P38307 211 aa4.43□□□□□ -1.7
VMA16YHR026W CUE1P38428 203 aa4.43□□□□□ -1.7
Retrieved 100 of 5,963 RNA–protein pairs in 295.4 ms