RNA–Protein interactions for RNA: YHR009C

TDA3, Transcript of Putative oxidoreductase involved in late endosome to Golgi transport, yeastyeast

Gene TDA3, Length 1,572 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TDA3YHR009C CTR2P38865 189 aa2.86□□□□□ -1.95
TDA3YHR009C YGL235WP53071 178 aa2.86□□□□□ -1.95
TDA3YHR009C CAB4P53332 305 aa2.86□□□□□ -1.95
TDA3YHR009C ELC1Q03071 99 aa2.86□□□□□ -1.95
TDA3YHR009C GRX8Q05926 109 aa2.86□□□□□ -1.95
TDA3YHR009C SCP1Q08873 200 aa2.86□□□□□ -1.95
TDA3YHR009C FSF1Q12029 327 aaKnown RBP2.86□□□□□ -1.95
TDA3YHR009C RPS28AQ3E7X9 67 aaPredicted RBP2.86□□□□□ -1.95
TDA3YHR009C COA6Q3E846 104 aa2.86□□□□□ -1.95
TDA3YHR009C TY3B-GQ99315 1547 aa2.86□□□□□ -1.95
TDA3YHR009C RPL9AP05738 191 aaKnown RBP2.85□□□□□ -1.95
TDA3YHR009C RPL22AP05749 121 aaKnown RBP2.85□□□□□ -1.95
TDA3YHR009C YHR032W-AP0C5N6 59 aa2.85□□□□□ -1.95
TDA3YHR009C KRE1P17260 313 aa2.85□□□□□ -1.95
TDA3YHR009C TAH1P25638 111 aaPredicted RBP2.85□□□□□ -1.95
TDA3YHR009C UGX2P32772 223 aa2.85□□□□□ -1.95
TDA3YHR009C YKR032WP36127 104 aa2.85□□□□□ -1.95
TDA3YHR009C SWM2P40342 146 aa2.85□□□□□ -1.95
TDA3YHR009C SMD3P43321 101 aaKnown RBP2.85□□□□□ -1.95
TDA3YHR009C RPL9BP51401 191 aaKnown RBP2.85□□□□□ -1.95
TDA3YHR009C YLR460CP54007 376 aa2.85□□□□□ -1.95
TDA3YHR009C UBC7Q02159 165 aa2.85□□□□□ -1.95
TDA3YHR009C IGO2Q9P305 131 aa2.85□□□□□ -1.95
TDA3YHR009C GCY1P14065 312 aaKnown RBP RIP-Chip data2.84□□□□□ -1.95not detected
TDA3YHR009C OCH1P31755 480 aa2.84□□□□□ -1.95
TDA3YHR009C SEC17P32602 292 aa2.84□□□□□ -1.95
TDA3YHR009C YET1P35723 206 aa2.84□□□□□ -1.95
TDA3YHR009C HMF1P40037 129 aaKnown RBP2.84□□□□□ -1.95
TDA3YHR009C MRPL49P40858 161 aaPredicted RBP2.84□□□□□ -1.95
TDA3YHR009C JAC1P53193 184 aa2.84□□□□□ -1.95
TDA3YHR009C YNL184CP53876 108 aa2.84□□□□□ -1.95
TDA3YHR009C APJ1P53940 528 aa2.84□□□□□ -1.95
TDA3YHR009C VPS28Q02767 242 aa2.84□□□□□ -1.95
TDA3YHR009C SUE1Q06524 206 aa2.84□□□□□ -1.95
TDA3YHR009C YOL024WQ08172 172 aa2.84□□□□□ -1.95
TDA3YHR009C PCC1Q3E833 88 aa2.84□□□□□ -1.95
TDA3YHR009C TY1B-BRQ12193 1756 aa2.84□□□□□ -1.96
TDA3YHR009C TY1B-GR3Q12316 1755 aa2.84□□□□□ -1.96
TDA3YHR009C TY1B-ORQ92393 1755 aa2.84□□□□□ -1.96
TDA3YHR009C SIR2P06700 562 aa2.83□□□□□ -1.96
TDA3YHR009C PUT1P09368 476 aa2.83□□□□□ -1.96
TDA3YHR009C YLR156WP0CE96 114 aa2.83□□□□□ -1.96
TDA3YHR009C YLR159WP0CE97 114 aa2.83□□□□□ -1.96
TDA3YHR009C YLR161WP0CE98 114 aa2.83□□□□□ -1.96
TDA3YHR009C YBR285WP38354 144 aa2.83□□□□□ -1.96
TDA3YHR009C YEA6P39953 335 aa2.83□□□□□ -1.96
TDA3YHR009C MOB1P40484 314 aa2.83□□□□□ -1.96
TDA3YHR009C DAN1P47178 298 aa2.83□□□□□ -1.96
TDA3YHR009C YGL088WP53151 121 aa2.83□□□□□ -1.96
TDA3YHR009C YPL067CQ02754 198 aa2.83□□□□□ -1.96
TDA3YHR009C TMA23Q03525 211 aa2.83□□□□□ -1.96
TDA3YHR009C FMN1Q03778 218 aa2.83□□□□□ -1.96
TDA3YHR009C TRM12Q04235 462 aa2.83□□□□□ -1.96
TDA3YHR009C YPL162CQ12042 273 aa2.83□□□□□ -1.96
TDA3YHR009C YGL194C-AQ2V2P6 80 aa2.83□□□□□ -1.96
TDA3YHR009C MED11Q99278 115 aa2.83□□□□□ -1.96
TDA3YHR009C NUM1Q00402 2748 aa2.83□□□□□ -1.96
TDA3YHR009C VTH1P40438 1549 aa2.83□□□□□ -1.96
TDA3YHR009C VTH2P40890 1549 aa2.83□□□□□ -1.96
TDA3YHR009C ANB1P19211 157 aa2.83□□□□□ -1.96
TDA3YHR009C MRP49P32388 137 aa2.83□□□□□ -1.96
TDA3YHR009C SHE2P36068 246 aaKnown RBP RIP-Chip data2.83□□□□□ -1.96not detected
TDA3YHR009C YBR013CP38215 129 aa2.83□□□□□ -1.96
TDA3YHR009C SNU13P39990 126 aaKnown RBP2.83□□□□□ -1.96
TDA3YHR009C GLR1P41921 483 aaKnown RBP2.83□□□□□ -1.96
TDA3YHR009C ERJ5P43613 295 aaPredicted RBP2.83□□□□□ -1.96
TDA3YHR009C MPA43P53583 542 aaPredicted RBP2.83□□□□□ -1.96
TDA3YHR009C AIM34Q03673 198 aa2.83□□□□□ -1.96
TDA3YHR009C SHH3Q04487 196 aa2.83□□□□□ -1.96
TDA3YHR009C PST2Q12335 198 aaKnown RBP2.83□□□□□ -1.96
TDA3YHR009C RDI1Q12434 202 aa2.83□□□□□ -1.96
TDA3YHR009C YFR032C-BQ8TGU2 87 aa2.83□□□□□ -1.96
TDA3YHR009C SNQ2P32568 1501 aaKnown RBP2.82□□□□□ -1.96
TDA3YHR009C TRX3P25372 127 aa2.82□□□□□ -1.96
TDA3YHR009C VMA11P32842 164 aa2.82□□□□□ -1.96
TDA3YHR009C YKR041WP36134 250 aa2.82□□□□□ -1.96
TDA3YHR009C PDX3P38075 228 aaKnown RBP2.82□□□□□ -1.96
TDA3YHR009C TIM8P57744 87 aa2.82□□□□□ -1.96
TDA3YHR009C HPT1Q04178 221 aaKnown RBP2.82□□□□□ -1.96
TDA3YHR009C CUE4Q04201 117 aaPredicted RBP2.82□□□□□ -1.96
TDA3YHR009C RPL13AQ12690 199 aaPredicted RBP2.82□□□□□ -1.96
TDA3YHR009C YCR075W-AQ3E830 75 aa2.82□□□□□ -1.96
TDA3YHR009C VAR1P02381 398 aa2.81□□□□□ -1.96
TDA3YHR009C RAD6P06104 172 aa2.81□□□□□ -1.96
TDA3YHR009C SNF4P12904 322 aa2.81□□□□□ -1.96
TDA3YHR009C MIG1P27705 504 aa2.81□□□□□ -1.96
TDA3YHR009C PAN3P36102 679 aaPredicted RBP2.81□□□□□ -1.96
TDA3YHR009C LSM2P38203 95 aaKnown RBP2.81□□□□□ -1.96
TDA3YHR009C YBR032WP38223 100 aa2.81□□□□□ -1.96
TDA3YHR009C HPA3P39979 161 aa2.81□□□□□ -1.96
TDA3YHR009C XPT1P47165 209 aa2.81□□□□□ -1.96
TDA3YHR009C HHT1P61830 136 aa2.81□□□□□ -1.96
TDA3YHR009C YMR099CQ03161 297 aaKnown RBP2.81□□□□□ -1.96
TDA3YHR009C MAK3Q03503 176 aa2.81□□□□□ -1.96
TDA3YHR009C RNH202Q05635 350 aa2.81□□□□□ -1.96
TDA3YHR009C YPR202WQ08993 238 aa2.81□□□□□ -1.96
TDA3YHR009C MCP1Q12106 302 aa2.81□□□□□ -1.96
TDA3YHR009C YLR050CQ12155 161 aaKnown RBP2.81□□□□□ -1.96
TDA3YHR009C YOR342CQ12182 319 aa2.81□□□□□ -1.96
TDA3YHR009C TY1B-JR2P47100 1755 aaKnown RBP2.81□□□□□ -1.96
Retrieved 100 of 5,963 RNA–protein pairs in 10.4 ms