RNA–Protein interactions for RNA: YGR133W

PEX4, Transcript of Peroxisomal ubiquitin conjugating enzyme, yeastyeast

Gene PEX4, Length 552 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PEX4YGR133W DDI3P0CH64 225 aa2.01□□□□□ -2.09
PEX4YGR133W CPR1P14832 162 aaKnown RBP2.01□□□□□ -2.09
PEX4YGR133W QCR9P22289 66 aa2.01□□□□□ -2.09
PEX4YGR133W PPA2P28239 310 aa2.01□□□□□ -2.09
PEX4YGR133W ARO2P28777 376 aaKnown RBP2.01□□□□□ -2.09
PEX4YGR133W ERG2P32352 222 aa2.01□□□□□ -2.09
PEX4YGR133W REC114P32841 428 aa2.01□□□□□ -2.09
PEX4YGR133W YKL187CP34231 750 aa2.01□□□□□ -2.09
PEX4YGR133W PAU16P35994 123 aa2.01□□□□□ -2.09
PEX4YGR133W PMU1P36069 295 aa2.01□□□□□ -2.09
PEX4YGR133W SWD2P36104 329 aaPredicted RBP2.01□□□□□ -2.09
PEX4YGR133W YHR180WP38868 163 aa2.01□□□□□ -2.09
PEX4YGR133W BDH1P39714 382 aa2.01□□□□□ -2.09
PEX4YGR133W COX15P40086 486 aa2.01□□□□□ -2.09
PEX4YGR133W CDC40P40968 455 aaPredicted RBP2.01□□□□□ -2.09
PEX4YGR133W TTI2P47168 421 aa2.01□□□□□ -2.09
PEX4YGR133W MIC26P50087 233 aa2.01□□□□□ -2.09
PEX4YGR133W THG1P53215 237 aaKnown RBP2.01□□□□□ -2.09
PEX4YGR133W LST7P53237 242 aa2.01□□□□□ -2.09
PEX4YGR133W YGR126WP53274 230 aa2.01□□□□□ -2.09
PEX4YGR133W AQR1P53943 586 aa2.01□□□□□ -2.09
PEX4YGR133W NCE101Q02820 53 aa2.01□□□□□ -2.09
PEX4YGR133W TSA2Q04120 196 aa2.01□□□□□ -2.09
PEX4YGR133W ATG39Q06159 398 aa2.01□□□□□ -2.09
PEX4YGR133W CNL1Q06333 122 aa2.01□□□□□ -2.09
PEX4YGR133W NAT3Q06504 195 aa2.01□□□□□ -2.09
PEX4YGR133W IRC19Q07843 230 aa2.01□□□□□ -2.09
PEX4YGR133W YOL029CQ08187 201 aa2.01□□□□□ -2.09
PEX4YGR133W SWT1Q12104 458 aa2.01□□□□□ -2.09
PEX4YGR133W MCP1Q12106 302 aa2.01□□□□□ -2.09
PEX4YGR133W TPT1Q12272 230 aaKnown RBP2.01□□□□□ -2.09
PEX4YGR133W YOR343CQ12484 108 aa2.01□□□□□ -2.09
PEX4YGR133W YBR255C-AQ3E776 120 aa2.01□□□□□ -2.09
PEX4YGR133W SLO1Q3E784 85 aa2.01□□□□□ -2.09
PEX4YGR133W YLR361C-AQ3E795 98 aa2.01□□□□□ -2.09
PEX4YGR133W SLH1P53327 1967 aaKnown RBP2□□□□□ -2.09
PEX4YGR133W COX2P00410 251 aa2□□□□□ -2.09
PEX4YGR133W RPL27AP0C2H6 136 aaKnown RBP2□□□□□ -2.09
PEX4YGR133W RPL27BP0C2H7 136 aaKnown RBP2□□□□□ -2.09
PEX4YGR133W YCR025CP25352 136 aa2□□□□□ -2.09
PEX4YGR133W YCR007CP25354 239 aa2□□□□□ -2.09
PEX4YGR133W MIG1P27705 504 aa2□□□□□ -2.09
PEX4YGR133W OCH1P31755 480 aa2□□□□□ -2.09
PEX4YGR133W SPS18P32572 300 aa2□□□□□ -2.09
PEX4YGR133W UTR5P32630 166 aa2□□□□□ -2.09
PEX4YGR133W YKL102CP34249 101 aa2□□□□□ -2.09
PEX4YGR133W MCH2P36032 473 aa2□□□□□ -2.09
PEX4YGR133W PRY2P36110 329 aa2□□□□□ -2.09
PEX4YGR133W SHB17P36136 271 aaKnown RBP2□□□□□ -2.09
PEX4YGR133W QDR3P38227 689 aa2□□□□□ -2.09
PEX4YGR133W YER121WP40076 114 aa2□□□□□ -2.09
PEX4YGR133W YER134CP40081 178 aa2□□□□□ -2.09
PEX4YGR133W PRE5P40302 234 aaKnown RBP2□□□□□ -2.09
PEX4YGR133W GPI2P46961 280 aa2□□□□□ -2.09
PEX4YGR133W XPT1P47165 209 aa2□□□□□ -2.09
PEX4YGR133W PDR17P53844 350 aa2□□□□□ -2.09
PEX4YGR133W DUG3P53871 357 aa2□□□□□ -2.09
PEX4YGR133W YNL184CP53876 108 aa2□□□□□ -2.09
PEX4YGR133W RPL21AQ02753 160 aaKnown RBP2□□□□□ -2.09
PEX4YGR133W YPL077CQ02831 240 aa2□□□□□ -2.09
PEX4YGR133W YPL039WQ03080 316 aa2□□□□□ -2.09
PEX4YGR133W CGI121Q03705 181 aaKnown RBP2□□□□□ -2.09
PEX4YGR133W YMR166CQ03829 368 aa2□□□□□ -2.09
PEX4YGR133W UPS3Q04006 179 aa2□□□□□ -2.09
PEX4YGR133W SDH7Q04401 133 aa2□□□□□ -2.09
PEX4YGR133W HRI1Q05905 244 aaKnown RBP2□□□□□ -2.09
PEX4YGR133W DIC1Q06143 298 aa2□□□□□ -2.09
PEX4YGR133W PAM18Q07914 168 aa2□□□□□ -2.09
PEX4YGR133W MIM1Q08176 113 aa2□□□□□ -2.09
PEX4YGR133W MCH4Q08268 501 aa2□□□□□ -2.09
PEX4YGR133W YOR105WQ08504 108 aa2□□□□□ -2.09
PEX4YGR133W YPL264CQ08980 353 aa2□□□□□ -2.09
PEX4YGR133W SMT3Q12306 101 aaKnown RBP2□□□□□ -2.09
PEX4YGR133W HUT1Q12520 339 aa2□□□□□ -2.09
PEX4YGR133W RPL21BQ12672 160 aaKnown RBP2□□□□□ -2.09
PEX4YGR133W YIR021W-AQ3E739 70 aa2□□□□□ -2.09
PEX4YGR133W YLR365WQ7LIF2 110 aa2□□□□□ -2.09
PEX4YGR133W SEC16P48415 2195 aaKnown RBP2□□□□□ -2.09
PEX4YGR133W UBR1P19812 1950 aa1.99□□□□□ -2.09
PEX4YGR133W SAL1D6W196 494 aa1.99□□□□□ -2.09
PEX4YGR133W MES1P00958 751 aaKnown RBP1.99□□□□□ -2.09
PEX4YGR133W YSF3P0C074 85 aaPredicted RBP1.99□□□□□ -2.09
PEX4YGR133W YPR170W-BP0C5R9 85 aa1.99□□□□□ -2.09
PEX4YGR133W ANB1P19211 157 aa1.99□□□□□ -2.09
PEX4YGR133W UGX2P32772 223 aa1.99□□□□□ -2.09
PEX4YGR133W DER1P38307 211 aa1.99□□□□□ -2.09
PEX4YGR133W YHL044WP38727 235 aa1.99□□□□□ -2.09
PEX4YGR133W TEM1P38987 245 aa1.99□□□□□ -2.09
PEX4YGR133W LYS1P38998 373 aaRIP-Chip data1.99□□□□□ -2.09not detected
PEX4YGR133W SNU13P39990 126 aaKnown RBP1.99□□□□□ -2.09
PEX4YGR133W YER188WP40103 239 aa1.99□□□□□ -2.09
PEX4YGR133W YNL208WP40159 199 aaKnown RBP1.99□□□□□ -2.09
PEX4YGR133W CYB5P40312 120 aa1.99□□□□□ -2.09
PEX4YGR133W YGR269WP40326 108 aa1.99□□□□□ -2.09
PEX4YGR133W YFR054CP43622 192 aa1.99□□□□□ -2.09
PEX4YGR133W RPA43P46669 326 aa1.99□□□□□ -2.09
PEX4YGR133W CIS3P47001 227 aa1.99□□□□□ -2.09
PEX4YGR133W SBH2P52871 88 aa1.99□□□□□ -2.09
PEX4YGR133W BOR1P53838 576 aa1.99□□□□□ -2.09
PEX4YGR133W RHO5P53879 331 aaKnown RBP1.99□□□□□ -2.09
Retrieved 100 of 5,963 RNA–protein pairs in 68.5 ms