RNA–Protein interactions for RNA: YER138C

YER138C, Transcript of Retrotransposon TYA Gag and TYB Pol genes, yeastyeast

Gene YER138C, Length 5,268 nt, Biotype protein coding.

RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YER138CYER138C PCL2P25693 308 aa2.23□□□□□ -2.05
YER138CYER138C MIG3P39943 394 aa2.23□□□□□ -2.05
YER138CYER138C PIR5P46999 287 aa2.23□□□□□ -2.05
YER138CYER138C BXI1P48558 297 aa2.23□□□□□ -2.05
YER138CYER138C PNC1P53184 216 aaKnown RBP2.23□□□□□ -2.05
YER138CYER138C CYC7P00045 113 aa2.23□□□□□ -2.05
YER138CYER138C SRB6P32570 121 aa2.23□□□□□ -2.05
YER138CYER138C GPX2P38143 162 aa2.23□□□□□ -2.05
YER138CYER138C CCS1P40202 249 aaKnown RBP2.23□□□□□ -2.05
YER138CYER138C CWP2P43497 92 aa2.23□□□□□ -2.05
YER138CYER138C COX12Q01519 83 aa2.23□□□□□ -2.05
YER138CYER138C ECM12O13529 151 aa2.22□□□□□ -2.05
YER138CYER138C RPL39P04650 51 aa2.22□□□□□ -2.05
YER138CYER138C RAD6P06104 172 aa2.22□□□□□ -2.05
YER138CYER138C ATP5P09457 212 aa2.22□□□□□ -2.05
YER138CYER138C UBI4P0CG63 381 aaKnown RBP2.22□□□□□ -2.05
YER138CYER138C YBL059WP34224 193 aa2.22□□□□□ -2.05
YER138CYER138C AST1P35183 429 aa2.22□□□□□ -2.05
YER138CYER138C RPL14AP36105 138 aaKnown RBP2.22□□□□□ -2.05
YER138CYER138C RPL14BP38754 138 aaKnown RBP2.22□□□□□ -2.05
YER138CYER138C MPM1P40364 252 aa2.22□□□□□ -2.05
YER138CYER138C VHS2P40463 436 aa2.22□□□□□ -2.05
YER138CYER138C YIL012WP40551 113 aa2.22□□□□□ -2.05
YER138CYER138C RPA43P46669 326 aa2.22□□□□□ -2.05
YER138CYER138C YJR096WP47137 282 aa2.22□□□□□ -2.05
YER138CYER138C NRG1Q03125 231 aa2.22□□□□□ -2.05
YER138CYER138C YMR253CQ04835 414 aa2.22□□□□□ -2.05
YER138CYER138C PEX27Q08580 376 aa2.22□□□□□ -2.05
YER138CYER138C TAO3P40468 2376 aa2.22□□□□□ -2.05
YER138CYER138C PIS1P06197 220 aaKnown RBP2.22□□□□□ -2.05
YER138CYER138C ERV1P27882 189 aa2.22□□□□□ -2.05
YER138CYER138C PET100P38958 111 aa2.22□□□□□ -2.05
YER138CYER138C BNA6P43619 295 aa2.22□□□□□ -2.05
YER138CYER138C YJR015WP47090 510 aa2.22□□□□□ -2.05
YER138CYER138C YGL149WP53116 101 aa2.22□□□□□ -2.05
YER138CYER138C UTP15Q04305 513 aaKnown RBP2.22□□□□□ -2.05
YER138CYER138C MED7Q08278 222 aa2.22□□□□□ -2.05
YER138CYER138C YGK3Q12222 375 aaPredicted RBP2.22□□□□□ -2.05
YER138CYER138C FUN14P18411 198 aa2.22□□□□□ -2.05
YER138CYER138C IMP1P28627 190 aa2.22□□□□□ -2.05
YER138CYER138C RRT13P40042 185 aa2.22□□□□□ -2.05
YER138CYER138C YDR274CP87283 123 aa2.22□□□□□ -2.05
YER138CYER138C FKS3Q04952 1785 aa2.22□□□□□ -2.05
YER138CYER138C ANT1Q06497 328 aa2.22□□□□□ -2.05
YER138CYER138C NCE102Q12207 173 aaRIP-Chip data2.22□□□□□ -2.05not detected
YER138CYER138C YBL112CQ3E7Y4 105 aa2.22□□□□□ -2.05
YER138CYER138C VPS63O13549 108 aa2.22□□□□□ -2.05
YER138CYER138C RPS25BP0C0T4 108 aaKnown RBP2.22□□□□□ -2.05
YER138CYER138C RPS11AP0CX47 156 aaKnown RBP2.22□□□□□ -2.05
YER138CYER138C RPS11BP0CX48 156 aaKnown RBP2.22□□□□□ -2.05
YER138CYER138C SAG1P20840 650 aa2.22□□□□□ -2.05
YER138CYER138C SCM4P32564 187 aa2.22□□□□□ -2.05
YER138CYER138C POP8P38208 133 aa2.22□□□□□ -2.05
YER138CYER138C DER1P38307 211 aa2.22□□□□□ -2.05
YER138CYER138C UBC12P52491 188 aa2.22□□□□□ -2.05
YER138CYER138C BOR1P53838 576 aa2.22□□□□□ -2.05
YER138CYER138C SNO1Q03144 224 aa2.22□□□□□ -2.05
YER138CYER138C IZH1Q03419 316 aa2.22□□□□□ -2.05
YER138CYER138C TMA23Q03525 211 aa2.22□□□□□ -2.05
YER138CYER138C NMA1Q06178 401 aaKnown RBP2.22□□□□□ -2.05
YER138CYER138C RPS25AQ3E792 108 aaPredicted RBP2.22□□□□□ -2.05
YER138CYER138C HTB2P02294 131 aa2.21□□□□□ -2.06
YER138CYER138C MRPL9P31334 269 aa2.21□□□□□ -2.06
YER138CYER138C MRPL16P38064 232 aa2.21□□□□□ -2.06
YER138CYER138C MRPS9P38120 278 aa2.21□□□□□ -2.06
YER138CYER138C ERG28P40030 148 aa2.21□□□□□ -2.06
YER138CYER138C HAC1P41546 238 aa2.21□□□□□ -2.06
YER138CYER138C MAK3Q03503 176 aa2.21□□□□□ -2.06
YER138CYER138C YOR343CQ12484 108 aa2.21□□□□□ -2.06
YER138CYER138C MRP2P10663 115 aaPredicted RBP2.21□□□□□ -2.06
YER138CYER138C YCR006CP25350 157 aa2.21□□□□□ -2.06
YER138CYER138C AME1P38313 324 aa2.21□□□□□ -2.06
YER138CYER138C GTT1P40582 234 aa2.21□□□□□ -2.06
YER138CYER138C TPC1P53257 314 aa2.21□□□□□ -2.06
YER138CYER138C YGR219WP53307 113 aa2.21□□□□□ -2.06
YER138CYER138C DPP1Q05521 289 aa2.21□□□□□ -2.06
YER138CYER138C CTR3Q06686 241 aa2.21□□□□□ -2.06
YER138CYER138C TY1A-NL1Q12391 440 aaKnown RBP2.21□□□□□ -2.06
YER138CYER138C TY1B-BRQ12193 1756 aa2.21□□□□□ -2.06
YER138CYER138C TY1B-GR3Q12316 1755 aa2.21□□□□□ -2.06
YER138CYER138C TY1B-ORQ92393 1755 aa2.21□□□□□ -2.06
YER138CYER138C DBP2P24783 546 aaKnown RBP2.21□□□□□ -2.06
YER138CYER138C YPT10P38146 199 aa2.21□□□□□ -2.06
YER138CYER138C SDH8P38345 138 aa2.21□□□□□ -2.06
YER138CYER138C YHR140WP38842 239 aa2.21□□□□□ -2.06
YER138CYER138C ASP1P38986 381 aaPredicted RBP2.21□□□□□ -2.06
YER138CYER138C MST28P39552 234 aa2.21□□□□□ -2.06
YER138CYER138C TY1A-MR1Q04215 440 aa2.21□□□□□ -2.06
YER138CYER138C TY1A-BLQ12266 440 aa2.21□□□□□ -2.06
YER138CYER138C SET6Q12529 373 aa2.21□□□□□ -2.06
YER138CYER138C CMC4Q3E7A9 73 aa2.21□□□□□ -2.06
YER138CYER138C YLR236CA0A023PZG4 107 aa2.21□□□□□ -2.06
YER138CYER138C ADH2P00331 348 aaKnown RBP2.21□□□□□ -2.06
YER138CYER138C MRS3P10566 314 aa2.21□□□□□ -2.06
YER138CYER138C RMD6P39975 231 aa2.21□□□□□ -2.06
YER138CYER138C YER076CP40049 302 aa2.21□□□□□ -2.06
YER138CYER138C PRY1P47032 299 aa2.21□□□□□ -2.06
YER138CYER138C MIC26P50087 233 aa2.21□□□□□ -2.06
YER138CYER138C YDR366CP87287 132 aa2.21□□□□□ -2.06
YER138CYER138C RDL1Q12305 139 aaKnown RBP2.21□□□□□ -2.06
Retrieved 100 of 5,963 RNA–protein pairs in 28 ms