RNA–Protein interactions for RNA: YDR233C

RTN1, Transcript of Reticulon protein, yeastyeast

Gene RTN1, Length 888 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RTN1YDR233C BRX1Q08235 291 aaKnown RBP2.37□□□□□ -2.03
RTN1YDR233C MSB2P32334 1306 aa2.37□□□□□ -2.03
RTN1YDR233C YLR422WQ06409 1932 aa2.36□□□□□ -2.03
RTN1YDR233C TIR1P10863 254 aa2.36□□□□□ -2.03
RTN1YDR233C AIM34Q03673 198 aa2.36□□□□□ -2.03
RTN1YDR233C NKP2Q06162 153 aa2.36□□□□□ -2.03
RTN1YDR233C YRF1-3P0CX14 1859 aa2.36□□□□□ -2.03
RTN1YDR233C YRF1-7P0CX15 1859 aa2.36□□□□□ -2.03
RTN1YDR233C YRF1-6P53819 1859 aa2.36□□□□□ -2.03
RTN1YDR233C RAD50P12753 1312 aa2.36□□□□□ -2.03
RTN1YDR233C YHL018WP38744 120 aaPredicted RBP2.35□□□□□ -2.03
RTN1YDR233C YPR174CQ06616 221 aaPredicted RBP2.35□□□□□ -2.03
RTN1YDR233C AHC2P25649 128 aa2.34□□□□□ -2.03
RTN1YDR233C CLG1P35190 452 aa2.34□□□□□ -2.03
RTN1YDR233C PAM17P36147 197 aa2.34□□□□□ -2.03
RTN1YDR233C POG1P40473 351 aa2.34□□□□□ -2.03
RTN1YDR233C YFH7P43591 353 aa2.34□□□□□ -2.03
RTN1YDR233C TMA22P47089 198 aaPredicted RBP2.34□□□□□ -2.03
RTN1YDR233C YNL247WP53852 767 aaKnown RBP2.34□□□□□ -2.03
RTN1YDR233C UBC7Q02159 165 aa2.34□□□□□ -2.03
RTN1YDR233C YNL146C-AQ3E7Z1 64 aa2.34□□□□□ -2.03
RTN1YDR233C MDM35O60200 86 aa2.33□□□□□ -2.04
RTN1YDR233C FLX1P40464 311 aa2.33□□□□□ -2.04
RTN1YDR233C GPI14P47088 403 aaKnown RBP2.33□□□□□ -2.04
RTN1YDR233C YNL033WP53964 284 aa2.33□□□□□ -2.04
RTN1YDR233C VPS71Q03433 280 aa2.33□□□□□ -2.04
RTN1YDR233C SHH3Q04487 196 aa2.33□□□□□ -2.04
RTN1YDR233C YMR253CQ04835 414 aa2.33□□□□□ -2.04
RTN1YDR233C PRP11Q07350 266 aaPredicted RBP2.33□□□□□ -2.04
RTN1YDR233C YET3Q07451 203 aa2.33□□□□□ -2.04
RTN1YDR233C ACC1Q00955 2233 aaKnown RBP2.32□□□□□ -2.04
RTN1YDR233C RIM15P43565 1770 aa2.32□□□□□ -2.04
RTN1YDR233C ARO7P32178 256 aa2.32□□□□□ -2.04
RTN1YDR233C SEC72P39742 193 aaKnown RBP2.32□□□□□ -2.04
RTN1YDR233C SPC25P40014 221 aa2.32□□□□□ -2.04
RTN1YDR233C YAE1P47118 141 aaPredicted RBP2.32□□□□□ -2.04
RTN1YDR233C DAD4P69851 72 aa2.32□□□□□ -2.04
RTN1YDR233C YHR007C-AQ07074 71 aa2.32□□□□□ -2.04
RTN1YDR233C YOR342CQ12182 319 aa2.32□□□□□ -2.04
RTN1YDR233C MPD1Q12404 318 aaKnown RBP2.32□□□□□ -2.04
RTN1YDR233C UTP10P42945 1769 aaKnown RBP2.31□□□□□ -2.04
RTN1YDR233C NSG1P38837 291 aa2.31□□□□□ -2.04
RTN1YDR233C NVJ1P38881 321 aa2.31□□□□□ -2.04
RTN1YDR233C CUP9P41817 306 aa2.31□□□□□ -2.04
RTN1YDR233C FMP32P43557 207 aa2.31□□□□□ -2.04
RTN1YDR233C JAC1P53193 184 aa2.31□□□□□ -2.04
RTN1YDR233C DIG2Q03373 323 aaKnown RBP2.31□□□□□ -2.04
RTN1YDR233C SHH4Q06236 168 aa2.31□□□□□ -2.04
RTN1YDR233C FYV12Q08559 129 aa2.31□□□□□ -2.04
RTN1YDR233C FIT2Q08906 153 aa2.31□□□□□ -2.04
RTN1YDR233C YPR014CQ6B0W2 109 aa2.31□□□□□ -2.04
RTN1YDR233C COX8P04039 78 aa2.3□□□□□ -2.04
RTN1YDR233C NSP1P14907 823 aaKnown RBP2.3□□□□□ -2.04
RTN1YDR233C IDP1P21954 428 aaKnown RBP2.3□□□□□ -2.04
RTN1YDR233C THG1P53215 237 aaKnown RBP2.3□□□□□ -2.04
RTN1YDR233C YIP3P53633 176 aa2.3□□□□□ -2.04
RTN1YDR233C YPR013CQ12145 317 aa2.3□□□□□ -2.04
RTN1YDR233C DGK1Q12382 290 aa2.3□□□□□ -2.04
RTN1YDR233C YLR412C-AQ3E742 68 aa2.3□□□□□ -2.04
RTN1YDR233C FIG2P25653 1609 aa2.3□□□□□ -2.04
RTN1YDR233C YKL102CP34249 101 aa2.29□□□□□ -2.04
RTN1YDR233C EGD2P38879 174 aaKnown RBP2.29□□□□□ -2.04
RTN1YDR233C RIO2P40160 425 aaKnown RBP2.29□□□□□ -2.04
RTN1YDR233C GPI17Q04080 534 aa2.29□□□□□ -2.04
RTN1YDR233C FLO1P32768 1537 aa2.28□□□□□ -2.04
RTN1YDR233C TRR1P29509 319 aaKnown RBP2.28□□□□□ -2.04
RTN1YDR233C MAK5P38112 773 aaPredicted RBP2.28□□□□□ -2.04
RTN1YDR233C AQY2P0CD90 149 aa2.27□□□□□ -2.05
RTN1YDR233C RPL35AP0CX84 120 aaKnown RBP2.27□□□□□ -2.05
RTN1YDR233C RPL35BP0CX85 120 aaKnown RBP2.27□□□□□ -2.05
RTN1YDR233C ECM4P36156 370 aa2.27□□□□□ -2.05
RTN1YDR233C YLR460CP54007 376 aa2.27□□□□□ -2.05
RTN1YDR233C ATP20Q12233 115 aa2.27□□□□□ -2.05
RTN1YDR233C PMD1P32634 1753 aa2.26□□□□□ -2.05
RTN1YDR233C MAK31P23059 88 aa2.26□□□□□ -2.05
RTN1YDR233C HYR1P40581 163 aaKnown RBP2.26□□□□□ -2.05
RTN1YDR233C SOL1P50278 321 aa2.26□□□□□ -2.05
RTN1YDR233C CWC27Q02770 301 aa2.26□□□□□ -2.05
RTN1YDR233C RCE1Q03530 315 aa2.26□□□□□ -2.05
RTN1YDR233C YMR252CQ04814 134 aa2.26□□□□□ -2.05
RTN1YDR233C PST2Q12335 198 aaKnown RBP2.26□□□□□ -2.05
RTN1YDR233C HPA3P39979 161 aa2.25□□□□□ -2.05
RTN1YDR233C HPT1Q04178 221 aaKnown RBP2.25□□□□□ -2.05
RTN1YDR233C FAS2P19097 1887 aaKnown RBP2.24□□□□□ -2.05
RTN1YDR233C YHL042WP38729 150 aa2.24□□□□□ -2.05
RTN1YDR233C NSA2P40078 261 aaKnown RBP2.24□□□□□ -2.05
RTN1YDR233C GAL83Q04739 417 aa2.24□□□□□ -2.05
RTN1YDR233C CPR5P35176 225 aa2.23□□□□□ -2.05
RTN1YDR233C EDC3P39998 551 aaKnown RBP2.23□□□□□ -2.05
RTN1YDR233C YEL008WP40001 126 aa2.23□□□□□ -2.05
RTN1YDR233C RFC2P40348 353 aa2.23□□□□□ -2.05
RTN1YDR233C YFL065CP43539 102 aa2.23□□□□□ -2.05
RTN1YDR233C SBH1P52870 82 aa2.23□□□□□ -2.05
RTN1YDR233C SMD2Q06217 110 aaKnown RBP2.23□□□□□ -2.05
RTN1YDR233C DAS2Q12084 232 aa2.23□□□□□ -2.05
RTN1YDR233C SEC14P24280 304 aaKnown RBP2.22□□□□□ -2.05
RTN1YDR233C RAD51P25454 400 aa2.22□□□□□ -2.05
RTN1YDR233C RPB7P34087 171 aa2.22□□□□□ -2.05
RTN1YDR233C SFK1P35735 353 aa2.22□□□□□ -2.05
RTN1YDR233C FYV4P38783 130 aaPredicted RBP2.22□□□□□ -2.05
Retrieved 100 of 5,963 RNA–protein pairs in 22.4 ms