RNA–Protein interactions for RNA: YDL064W

UBC9, Transcript of SUMO-conjugating enzyme involved in the Smt3p conjugation pathway, yeastyeast

Gene UBC9, Length 474 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBC9YDL064W YEL073CP39974 107 aa1.29□□□□□ -2.2
UBC9YDL064W PLP1Q04004 230 aa1.29□□□□□ -2.2
UBC9YDL064W UBC8P28263 218 aa1.28□□□□□ -2.2
UBC9YDL064W YRA2P36036 203 aaKnown RBP RIP-Chip data1.28□□□□□ -2.2not detected
UBC9YDL064W XPT1P47165 209 aa1.28□□□□□ -2.2
UBC9YDL064W GRX5Q02784 150 aa1.28□□□□□ -2.2
UBC9YDL064W TRM3Q07527 1436 aa1.27□□□□□ -2.21
UBC9YDL064W AHT1P29589 182 aa1.27□□□□□ -2.21
UBC9YDL064W GLR1P41921 483 aaKnown RBP1.27□□□□□ -2.21
UBC9YDL064W YFL051CP43552 160 aa1.27□□□□□ -2.21
UBC9YDL064W PAC10P48363 199 aa1.27□□□□□ -2.21
UBC9YDL064W SBH2P52871 88 aa1.27□□□□□ -2.21
UBC9YDL064W SYM1Q06563 197 aa1.27□□□□□ -2.21
UBC9YDL064W NUF2P33895 451 aa1.26□□□□□ -2.21
UBC9YDL064W YGL101WP53144 215 aa1.26□□□□□ -2.21
UBC9YDL064W FIT1Q04433 528 aa1.26□□□□□ -2.21
UBC9YDL064W PTC1P35182 281 aa1.25□□□□□ -2.21
UBC9YDL064W VPS51P36116 164 aa1.25□□□□□ -2.21
UBC9YDL064W MOB1P40484 314 aa1.25□□□□□ -2.21
UBC9YDL064W CMC2Q3E7A4 109 aa1.25□□□□□ -2.21
UBC9YDL064W RPL37BP51402 88 aaKnown RBP1.24□□□□□ -2.21
UBC9YDL064W ORM1P53224 222 aa1.24□□□□□ -2.21
UBC9YDL064W HHT1P61830 136 aa1.24□□□□□ -2.21
UBC9YDL064W TLG1Q03322 224 aa1.24□□□□□ -2.21
UBC9YDL064W YDL241WQ07738 123 aa1.24□□□□□ -2.21
UBC9YDL064W RDI1Q12434 202 aa1.24□□□□□ -2.21
UBC9YDL064W MON2P48563 1636 aaPredicted RBP1.23□□□□□ -2.21
UBC9YDL064W LIP1Q03579 150 aa1.23□□□□□ -2.21
UBC9YDL064W LCL2Q08045 131 aa1.23□□□□□ -2.21
UBC9YDL064W HRD1Q08109 551 aa1.23□□□□□ -2.21
UBC9YDL064W YGR269WP40326 108 aa1.22□□□□□ -2.21
UBC9YDL064W NQM1P53228 333 aaPredicted RBP1.22□□□□□ -2.21
UBC9YDL064W YDL157CQ12082 118 aa1.22□□□□□ -2.21
UBC9YDL064W SPS2P08459 502 aa1.21□□□□□ -2.22
UBC9YDL064W UBI4P0CG63 381 aaKnown RBP1.21□□□□□ -2.22
UBC9YDL064W SHB17P36136 271 aaKnown RBP1.21□□□□□ -2.22
UBC9YDL064W CCC1P47818 322 aa1.21□□□□□ -2.22
UBC9YDL064W TMA20P89886 181 aaPredicted RBP1.21□□□□□ -2.22
UBC9YDL064W YML079WQ03629 201 aa1.21□□□□□ -2.22
UBC9YDL064W YLR053CQ12026 108 aa1.21□□□□□ -2.22
UBC9YDL064W YLR046CQ12253 270 aa1.21□□□□□ -2.22
UBC9YDL064W DNA2P38859 1522 aa1.2□□□□□ -2.22
UBC9YDL064W YPR114WQ06107 315 aa1.2□□□□□ -2.22
UBC9YDL064W YPR202WQ08993 238 aa1.2□□□□□ -2.22
UBC9YDL064W ATP5P09457 212 aa1.19□□□□□ -2.22
UBC9YDL064W INO4P13902 151 aa1.19□□□□□ -2.22
UBC9YDL064W LSM3P57743 89 aaKnown RBP1.19□□□□□ -2.22
UBC9YDL064W YDR102CQ03864 110 aa1.19□□□□□ -2.22
UBC9YDL064W ATG10Q07879 167 aa1.19□□□□□ -2.22
UBC9YDL064W UIP4Q08926 304 aa1.19□□□□□ -2.22
UBC9YDL064W QCR2P07257 368 aa1.18□□□□□ -2.22
UBC9YDL064W YER188C-AP0C0V2 99 aa1.18□□□□□ -2.22
UBC9YDL064W FES1P38260 290 aa1.18□□□□□ -2.22
UBC9YDL064W SLM6P38343 150 aa1.18□□□□□ -2.22
UBC9YDL064W YPT31P38555 223 aaKnown RBP1.18□□□□□ -2.22
UBC9YDL064W HTD2P38790 280 aaKnown RBP1.18□□□□□ -2.22
UBC9YDL064W CMC4Q3E7A9 73 aa1.18□□□□□ -2.22
UBC9YDL064W SPA2P23201 1466 aaKnown RBP1.18□□□□□ -2.22
UBC9YDL064W RPS25BP0C0T4 108 aaKnown RBP1.17□□□□□ -2.22
UBC9YDL064W YKR070WP36151 352 aaKnown RBP1.17□□□□□ -2.22
UBC9YDL064W AME1P38313 324 aa1.17□□□□□ -2.22
UBC9YDL064W YNR064CP53750 290 aa1.17□□□□□ -2.22
UBC9YDL064W RPS25AQ3E792 108 aaPredicted RBP1.17□□□□□ -2.22
UBC9YDL064W RPS28BP0C0X0 67 aaKnown RBP1.16□□□□□ -2.22
UBC9YDL064W MRS4P23500 304 aa1.16□□□□□ -2.22
UBC9YDL064W DCV1P43595 202 aa1.16□□□□□ -2.22
UBC9YDL064W FIP1P45976 327 aa1.16□□□□□ -2.22
UBC9YDL064W YGL230CP53074 147 aa1.16□□□□□ -2.22
UBC9YDL064W CCW12Q12127 133 aa1.16□□□□□ -2.22
UBC9YDL064W RPS28AQ3E7X9 67 aaPredicted RBP1.16□□□□□ -2.22
UBC9YDL064W RPL30P14120 105 aaKnown RBP1.15□□□□□ -2.23
UBC9YDL064W YAR064WP39563 99 aa1.15□□□□□ -2.23
UBC9YDL064W YGL193CP53097 103 aa1.15□□□□□ -2.23
UBC9YDL064W YDR476CQ03362 224 aa1.15□□□□□ -2.23
UBC9YDL064W MAK3Q03503 176 aa1.15□□□□□ -2.23
UBC9YDL064W SPT14P32363 452 aa1.14□□□□□ -2.23
UBC9YDL064W HSP150P32478 413 aa1.14□□□□□ -2.23
UBC9YDL064W SRP102P36057 244 aaPredicted RBP1.14□□□□□ -2.23
UBC9YDL064W DER1P38307 211 aa1.14□□□□□ -2.23
UBC9YDL064W AIM36Q03798 255 aa1.14□□□□□ -2.23
UBC9YDL064W FCY1Q12178 158 aa1.14□□□□□ -2.23
UBC9YDL064W UGX2P32772 223 aa1.13□□□□□ -2.23
UBC9YDL064W DLS1P40366 167 aa1.13□□□□□ -2.23
UBC9YDL064W NSL1Q12143 216 aa1.13□□□□□ -2.23
UBC9YDL064W KIN28P06242 306 aa1.12□□□□□ -2.23
UBC9YDL064W PRE1P22141 198 aaKnown RBP1.12□□□□□ -2.23
UBC9YDL064W PEX34P25584 144 aa1.12□□□□□ -2.23
UBC9YDL064W UBC6P33296 250 aaPredicted RBP1.12□□□□□ -2.23
UBC9YDL064W YEL014CP39999 101 aa1.12□□□□□ -2.23
UBC9YDL064W APQ12P40532 138 aa1.12□□□□□ -2.23
UBC9YDL064W CIN5P40917 295 aa1.12□□□□□ -2.23
UBC9YDL064W YJR015WP47090 510 aa1.12□□□□□ -2.23
UBC9YDL064W GEP7P53171 287 aa1.12□□□□□ -2.23
UBC9YDL064W YDC1Q02896 317 aa1.12□□□□□ -2.23
UBC9YDL064W SMD2Q06217 110 aaKnown RBP1.12□□□□□ -2.23
UBC9YDL064W TAF2P23255 1407 aa1.12□□□□□ -2.23
UBC9YDL064W ADE6P38972 1358 aaKnown RBP1.11□□□□□ -2.23
UBC9YDL064W YJL218WP40892 196 aaKnown RBP1.11□□□□□ -2.23
UBC9YDL064W KEI1Q06346 221 aa1.11□□□□□ -2.23
UBC9YDL064W BUB2P26448 306 aaPredicted RBP1.09□□□□□ -2.23
Retrieved 100 of 5,963 RNA–protein pairs in 24.2 ms