RNA–Protein interactions for RNA: YCR024C-A

PMP1, Transcript of Regulatory subunit for the plasma membrane H(+)-ATPase Pma1p, yeast

Gene PMP1, Length 123 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PMP1	YCR024C-A	PTC1	P35182	281 aa		0.28	□□□□□ -2.36
PMP1	YCR024C-A	YRA2	P36036	203 aa	Known RBP RIP-Chip data	0.28	□□□□□ -2.36	not detected
PMP1	YCR024C-A	VPS51	P36116	164 aa		0.28	□□□□□ -2.36
PMP1	YCR024C-A	FMP23	P38231	175 aa		0.28	□□□□□ -2.36
PMP1	YCR024C-A	EGD2	P38879	174 aa	Known RBP	0.28	□□□□□ -2.36
PMP1	YCR024C-A	YEL073C	P39974	107 aa		0.28	□□□□□ -2.36
PMP1	YCR024C-A	YGR269W	P40326	108 aa		0.28	□□□□□ -2.36
PMP1	YCR024C-A	NSE4	P43124	402 aa		0.28	□□□□□ -2.36
PMP1	YCR024C-A	DCV1	P43595	202 aa		0.28	□□□□□ -2.36
PMP1	YCR024C-A	XPT1	P47165	209 aa		0.28	□□□□□ -2.36
PMP1	YCR024C-A	SOL1	P50278	321 aa		0.28	□□□□□ -2.36
PMP1	YCR024C-A	GEP7	P53171	287 aa		0.28	□□□□□ -2.36
PMP1	YCR024C-A	MAK3	Q03503	176 aa		0.28	□□□□□ -2.36
PMP1	YCR024C-A	AIM36	Q03798	255 aa		0.28	□□□□□ -2.36
PMP1	YCR024C-A	ELP6	Q04868	273 aa		0.28	□□□□□ -2.36
PMP1	YCR024C-A	SYM1	Q06563	197 aa		0.28	□□□□□ -2.36
PMP1	YCR024C-A	VAM10	Q08474	114 aa		0.28	□□□□□ -2.36
PMP1	YCR024C-A	YLR050C	Q12155	161 aa	Known RBP	0.28	□□□□□ -2.36
PMP1	YCR024C-A	FCY1	Q12178	158 aa		0.28	□□□□□ -2.36
PMP1	YCR024C-A	PST2	Q12335	198 aa	Known RBP	0.28	□□□□□ -2.36
PMP1	YCR024C-A	RPS28A	Q3E7X9	67 aa	Predicted RBP	0.28	□□□□□ -2.36
PMP1	YCR024C-A	TAR1	Q8TGM6	124 aa		0.28	□□□□□ -2.36
PMP1	YCR024C-A	DUR1,2	P32528	1835 aa	Known RBP	0.27	□□□□□ -2.37
PMP1	YCR024C-A	YER188C-A	P0C0V2	99 aa		0.27	□□□□□ -2.37
PMP1	YCR024C-A	MAK31	P23059	88 aa		0.27	□□□□□ -2.37
PMP1	YCR024C-A	RAD51	P25454	400 aa		0.27	□□□□□ -2.37
PMP1	YCR024C-A	UBC8	P28263	218 aa		0.27	□□□□□ -2.37
PMP1	YCR024C-A	NUF2	P33895	451 aa		0.27	□□□□□ -2.37
PMP1	YCR024C-A	SHB17	P36136	271 aa	Known RBP	0.27	□□□□□ -2.37
PMP1	YCR024C-A	ETR1	P38071	380 aa		0.27	□□□□□ -2.37
PMP1	YCR024C-A	CSH1	P38287	376 aa		0.27	□□□□□ -2.37
PMP1	YCR024C-A	FYV4	P38783	130 aa	Predicted RBP	0.27	□□□□□ -2.37
PMP1	YCR024C-A	CIN5	P40917	295 aa		0.27	□□□□□ -2.37
PMP1	YCR024C-A	YGL193C	P53097	103 aa		0.27	□□□□□ -2.37
PMP1	YCR024C-A	YGL101W	P53144	215 aa		0.27	□□□□□ -2.37
PMP1	YCR024C-A	YNL140C	P53910	189 aa		0.27	□□□□□ -2.37
PMP1	YCR024C-A	YDC1	Q02896	317 aa		0.27	□□□□□ -2.37
PMP1	YCR024C-A	LIP1	Q03579	150 aa		0.27	□□□□□ -2.37
PMP1	YCR024C-A	THI74	Q04083	370 aa		0.27	□□□□□ -2.37
PMP1	YCR024C-A	GIM5	Q04493	163 aa		0.27	□□□□□ -2.37
PMP1	YCR024C-A	AVO2	Q04749	426 aa		0.27	□□□□□ -2.37
PMP1	YCR024C-A	YPR203W	Q08994	102 aa		0.27	□□□□□ -2.37
PMP1	YCR024C-A	YOR381W-A	Q3E804	55 aa		0.27	□□□□□ -2.37
PMP1	YCR024C-A	QCR2	P07257	368 aa		0.26	□□□□□ -2.37
PMP1	YCR024C-A	YGL041W-A	P0C5N3	154 aa		0.26	□□□□□ -2.37
PMP1	YCR024C-A	PBI2	P0CT04	75 aa	Known RBP	0.26	□□□□□ -2.37
PMP1	YCR024C-A	UGX2	P32772	223 aa		0.26	□□□□□ -2.37
PMP1	YCR024C-A	SRP102	P36057	244 aa	Predicted RBP	0.26	□□□□□ -2.37
PMP1	YCR024C-A	HTD2	P38790	280 aa	Known RBP	0.26	□□□□□ -2.37
PMP1	YCR024C-A	YEL014C	P39999	101 aa		0.26	□□□□□ -2.37
PMP1	YCR024C-A	YJR015W	P47090	510 aa		0.26	□□□□□ -2.37
PMP1	YCR024C-A	CCC1	P47818	322 aa		0.26	□□□□□ -2.37
PMP1	YCR024C-A	KEI1	Q06346	221 aa		0.26	□□□□□ -2.37
PMP1	YCR024C-A	LCL2	Q08045	131 aa		0.26	□□□□□ -2.37
PMP1	YCR024C-A	SPA2	P23201	1466 aa	Known RBP	0.25	□□□□□ -2.37
PMP1	YCR024C-A	TAF2	P23255	1407 aa		0.25	□□□□□ -2.37
PMP1	YCR024C-A	SPS2	P08459	502 aa		0.25	□□□□□ -2.37
PMP1	YCR024C-A	ATP5	P09457	212 aa		0.25	□□□□□ -2.37
PMP1	YCR024C-A	RPS25B	P0C0T4	108 aa	Known RBP	0.25	□□□□□ -2.37
PMP1	YCR024C-A	YCR001W	P25347	104 aa		0.25	□□□□□ -2.37
PMP1	YCR024C-A	PEX34	P25584	144 aa		0.25	□□□□□ -2.37
PMP1	YCR024C-A	BUB2	P26448	306 aa	Predicted RBP	0.25	□□□□□ -2.37
PMP1	YCR024C-A	YKR070W	P36151	352 aa	Known RBP	0.25	□□□□□ -2.37
PMP1	YCR024C-A	ECM31	P38122	312 aa		0.25	□□□□□ -2.37
PMP1	YCR024C-A	YNL200C	P40165	246 aa	Known RBP	0.25	□□□□□ -2.37
PMP1	YCR024C-A	NQM1	P53228	333 aa	Predicted RBP	0.25	□□□□□ -2.37
PMP1	YCR024C-A	YLR053C	Q12026	108 aa		0.25	□□□□□ -2.37
PMP1	YCR024C-A	CCW12	Q12127	133 aa		0.25	□□□□□ -2.37
PMP1	YCR024C-A	RDI1	Q12434	202 aa		0.25	□□□□□ -2.37
PMP1	YCR024C-A	RPS25A	Q3E792	108 aa	Predicted RBP	0.25	□□□□□ -2.37
PMP1	YCR024C-A	RIF1	P29539	1916 aa		0.25	□□□□□ -2.37
PMP1	YCR024C-A	ADE6	P38972	1358 aa	Known RBP	0.24	□□□□□ -2.37
PMP1	YCR024C-A	UBI4	P0CG63	381 aa	Known RBP	0.24	□□□□□ -2.37
PMP1	YCR024C-A	RPL35A	P0CX84	120 aa	Known RBP	0.24	□□□□□ -2.37
PMP1	YCR024C-A	RPL35B	P0CX85	120 aa	Known RBP	0.24	□□□□□ -2.37
PMP1	YCR024C-A	HYP2	P23301	157 aa	Known RBP	0.24	□□□□□ -2.37
PMP1	YCR024C-A	HSP150	P32478	413 aa		0.24	□□□□□ -2.37
PMP1	YCR024C-A	SRL3	P36167	246 aa		0.24	□□□□□ -2.37
PMP1	YCR024C-A	YBR027C	P38220	110 aa		0.24	□□□□□ -2.37
PMP1	YCR024C-A	FES1	P38260	290 aa		0.24	□□□□□ -2.37
PMP1	YCR024C-A	AME1	P38313	324 aa		0.24	□□□□□ -2.37
PMP1	YCR024C-A	YPT31	P38555	223 aa	Known RBP	0.24	□□□□□ -2.37
PMP1	YCR024C-A	YER121W	P40076	114 aa		0.24	□□□□□ -2.37
PMP1	YCR024C-A	APS3	P47064	194 aa		0.24	□□□□□ -2.37
PMP1	YCR024C-A	PAC10	P48363	199 aa		0.24	□□□□□ -2.37
PMP1	YCR024C-A	YNR064C	P53750	290 aa		0.24	□□□□□ -2.37
PMP1	YCR024C-A	YNL122C	P53921	115 aa	Predicted RBP	0.24	□□□□□ -2.37
PMP1	YCR024C-A	HSK3	P69852	69 aa		0.24	□□□□□ -2.37
PMP1	YCR024C-A	ATP19	P81451	68 aa		0.24	□□□□□ -2.37
PMP1	YCR024C-A	YDL241W	Q07738	123 aa		0.24	□□□□□ -2.37
PMP1	YCR024C-A	RRT7	Q07829	113 aa		0.24	□□□□□ -2.37
PMP1	YCR024C-A	ATG10	Q07879	167 aa		0.24	□□□□□ -2.37
PMP1	YCR024C-A	YPR202W	Q08993	238 aa		0.24	□□□□□ -2.37
PMP1	YCR024C-A	CMC2	Q3E7A4	109 aa		0.24	□□□□□ -2.37
PMP1	YCR024C-A	CHD1	P32657	1468 aa		0.23	□□□□□ -2.37
PMP1	YCR024C-A	KIN28	P06242	306 aa		0.23	□□□□□ -2.37
PMP1	YCR024C-A	RPL30	P14120	105 aa	Known RBP	0.23	□□□□□ -2.37
PMP1	YCR024C-A	SPT14	P32363	452 aa		0.23	□□□□□ -2.37
PMP1	YCR024C-A	DLS1	P40366	167 aa		0.23	□□□□□ -2.37
PMP1	YCR024C-A	APQ12	P40532	138 aa		0.23	□□□□□ -2.37

Retrieved 100 of 5,963 RNA–protein pairs in 48.6 ms